RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 BRD1O95696 1058 aa17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 ZSCAN22P10073 491 aaPredicted RBP17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 XBP1P17861 261 aa17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 GUCY1A2P33402 732 aa17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 GPATCH4Q5T3I0 446 aaKnown RBP17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 DCAF4Q8WV16 495 aa17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 C8orf76Q96K31 380 aa17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 GBP4Q96PP9 640 aa17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 P2RX7Q99572 595 aaKnown RBP17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 ALG1Q9BT22 464 aa17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 GOPCQ9HD26 462 aa17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 MAD2L2Q9UI95 211 aa17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 ISY1Q9ULR0 285 aaKnown RBP17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 ATP6V1DQ9Y5K8 247 aa17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 PALM3A6NDB9 673 aaPredicted RBP17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 TNPO2O14787 897 aaKnown RBP17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 PRPF3O43395 683 aaKnown RBP17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 PDHBP11177 359 aa17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 FDPSP14324 419 aaKnown RBP17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 EN2P19622 333 aaPredicted RBP17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 SMARCA1P28370 1054 aa17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 FLT3LGP49771 235 aa17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 USP14P54578 494 aa17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 IRX3P78415 501 aaPredicted RBP17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 CCDC96Q2M329 555 aa17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 SLFN13Q68D06 897 aa17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 CMTR1Q8N1G2 835 aaKnown RBP17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 SLAIN1Q8ND83 568 aa17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 RGS22Q8NE09 1264 aa17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 GMCL1P1Q8NEA9 526 aa17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 GTF3C2Q8WUA4 911 aaPredicted RBP17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 COA7Q96BR5 231 aa17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 GABRQQ9UN88 632 aa17.54■□□□□ 0.4
TMEM39A-203ENST00000461654 MGAMO43451 1857 aa17.53■□□□□ 0.4
TMEM39A-203ENST00000461654 SNHG28P0DPA3 235 aa17.53■□□□□ 0.4
TMEM39A-203ENST00000461654 SLC1A4P43007 532 aa17.53■□□□□ 0.4
TMEM39A-203ENST00000461654 HERVK_113P62684 666 aa17.53■□□□□ 0.4
TMEM39A-203ENST00000461654 PKP1Q13835 747 aa17.53■□□□□ 0.4
TMEM39A-203ENST00000461654 FOXD4L5Q5VV16 416 aaPredicted RBP17.53■□□□□ 0.4
TMEM39A-203ENST00000461654 SRBD1Q8N5C6 995 aaKnown RBP17.53■□□□□ 0.4
TMEM39A-203ENST00000461654 FOXD4L4Q8WXT5 416 aaPredicted RBP17.53■□□□□ 0.4
TMEM39A-203ENST00000461654 TNPO1Q92973 898 aaKnown RBP17.53■□□□□ 0.4
TMEM39A-203ENST00000461654 FEZ1Q99689 392 aa17.53■□□□□ 0.4
TMEM39A-203ENST00000461654 RBPJLQ9UBG7 517 aa17.53■□□□□ 0.4
TMEM39A-203ENST00000461654 MTMR6Q9Y217 621 aa17.53■□□□□ 0.4
TMEM39A-203ENST00000461654 V9GY48 417 aaPredicted RBP17.53■□□□□ 0.4
TMEM39A-203ENST00000461654 GREB1LQ9C091 1923 aaPredicted RBP17.53■□□□□ 0.4
TMEM39A-203ENST00000461654 USP17L15C9J2P7 530 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 USP17L13C9JLJ4 530 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 USP17L11C9JVI0 530 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 USP17L18D6R9N7 530 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 USP17L22D6RA61 530 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 USP17L17D6RBQ6 530 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 USP17L19D6RCP7 530 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 USP17L20D6RJB6 530 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 F5H6K3 240 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 GOLGA8HP0CJ92 632 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 FOSBP53539 338 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 UBXN2AP68543 259 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 KLRC3Q07444 240 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 USP17L24Q0WX57 530 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 SIAH1Q8IUQ4 282 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 STAG2Q8N3U4 1231 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 GPRC5AQ8NFJ5 357 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 ACER1Q8TDN7 264 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 GMCL1Q96IK5 515 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 SPZ1Q9BXG8 430 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 TMX2Q9Y320 296 aa17.52■□□□□ 0.4
TMEM39A-203ENST00000461654 FRMPD2Q68DX3 1309 aaPredicted RBP17.51■□□□□ 0.39
TMEM39A-203ENST00000461654 CNTNAP5Q8WYK1 1306 aa17.51■□□□□ 0.39
TMEM39A-203ENST00000461654 ADCY3O60266 1144 aa17.51■□□□□ 0.39
TMEM39A-203ENST00000461654 F13A1P00488 732 aa17.51■□□□□ 0.39
TMEM39A-203ENST00000461654 ZNF543Q08ER8 600 aa17.51■□□□□ 0.39
TMEM39A-203ENST00000461654 FUT2Q10981 343 aa17.51■□□□□ 0.39
TMEM39A-203ENST00000461654 SAFBQ15424 915 aaKnown RBP eCLIP17.51■□□□□ 0.39
TMEM39A-203ENST00000461654 MCTP1Q6DN14 999 aa17.51■□□□□ 0.39
TMEM39A-203ENST00000461654 CATSPERGQ6ZRH7 1159 aa17.51■□□□□ 0.39
TMEM39A-203ENST00000461654 RRP36Q96EU6 259 aaKnown RBP17.51■□□□□ 0.39
TMEM39A-203ENST00000461654 ZSCAN16Q9H4T2 348 aaPredicted RBP17.51■□□□□ 0.39
TMEM39A-203ENST00000461654 GPCPD1Q9NPB8 672 aa17.51■□□□□ 0.39
TMEM39A-203ENST00000461654 SEC63Q9UGP8 760 aaKnown RBP17.51■□□□□ 0.39
TMEM39A-203ENST00000461654 GJD2Q9UKL4 321 aa17.51■□□□□ 0.39
TMEM39A-203ENST00000461654 ZDHHC9Q9Y397 364 aa17.51■□□□□ 0.39
TMEM39A-203ENST00000461654 GJB1P08034 283 aa17.5■□□□□ 0.39
TMEM39A-203ENST00000461654 CAPN2P17655 700 aa17.5■□□□□ 0.39
TMEM39A-203ENST00000461654 GNL2Q13823 731 aaKnown RBP17.5■□□□□ 0.39
TMEM39A-203ENST00000461654 MTFR1Q15390 333 aa17.5■□□□□ 0.39
TMEM39A-203ENST00000461654 POTEEQ6S8J3 1075 aa17.5■□□□□ 0.39
TMEM39A-203ENST00000461654 LBX2Q6XYB7 198 aa17.5■□□□□ 0.39
TMEM39A-203ENST00000461654 FBXO18Q8NFZ0 1043 aa17.5■□□□□ 0.39
TMEM39A-203ENST00000461654 TXNRD2Q9NNW7 524 aa17.5■□□□□ 0.39
TMEM39A-203ENST00000461654 A0A1W2PRG0 241 aa17.49■□□□□ 0.39
TMEM39A-203ENST00000461654 GOLGA6L22H0YM25 854 aa17.49■□□□□ 0.39
TMEM39A-203ENST00000461654 TNRC18O15417 2968 aaPredicted RBP17.49■□□□□ 0.39
TMEM39A-203ENST00000461654 NDUFB10O96000 172 aa17.49■□□□□ 0.39
TMEM39A-203ENST00000461654 BMP3P12645 472 aa17.49■□□□□ 0.39
TMEM39A-203ENST00000461654 SCG2P13521 617 aa17.49■□□□□ 0.39
TMEM39A-203ENST00000461654 VCAM1P19320 739 aa17.49■□□□□ 0.39
TMEM39A-203ENST00000461654 GUCY1B3Q02153 619 aa17.49■□□□□ 0.39
TMEM39A-203ENST00000461654 IKQ13123 557 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms