RNA–Protein interactions for RNA: ENST00000461289.2

CHL1-209, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 462 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-209ENST00000461289 TCFL5Q9UL49 500 aa9.12□□□□□ -0.95
CHL1-209ENST00000461289 HSD3B2P26439 372 aa9.11□□□□□ -0.95
CHL1-209ENST00000461289 PRKCQQ04759 706 aa9.11□□□□□ -0.95
CHL1-209ENST00000461289 EGR3Q06889 387 aa9.11□□□□□ -0.95
CHL1-209ENST00000461289 SQSTM1Q13501 440 aa9.11□□□□□ -0.95
CHL1-209ENST00000461289 RNF111Q6ZNA4 994 aa9.11□□□□□ -0.95
CHL1-209ENST00000461289 FOXP3Q9BZS1 431 aa9.11□□□□□ -0.95
CHL1-209ENST00000461289 SLKQ9H2G2 1235 aaPredicted RBP9.11□□□□□ -0.95
CHL1-209ENST00000461289 NKX2-4Q9H2Z4 354 aa9.11□□□□□ -0.95
CHL1-209ENST00000461289 TMEM260Q9NX78 707 aa9.11□□□□□ -0.95
CHL1-209ENST00000461289 PCDHA11Q9Y5I1 949 aa9.11□□□□□ -0.95
CHL1-209ENST00000461289 TRBV23-1A0A0A0MS06 115 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 ENPP3O14638 875 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 GSTM1P09488 218 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 FGFR1P11362 822 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 PABPC1P11940 636 aaKnown RBP9.1□□□□□ -0.95
CHL1-209ENST00000461289 VAV1P15498 845 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 ENDOUP21128 410 aaKnown RBP9.1□□□□□ -0.95
CHL1-209ENST00000461289 HOXC12P31275 282 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 ECI1P42126 302 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 GRIA2P42262 883 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 SEPHS1P49903 392 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 GAB4Q2WGN9 574 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 YOD1Q5VVQ6 348 aaPredicted RBP9.1□□□□□ -0.95
CHL1-209ENST00000461289 KSR1Q8IVT5 923 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 SCUBE1Q8IWY4 988 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 NAT16Q8N8M0 369 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 LINC00116Q8NCU8 138 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 KCTD13Q8WZ19 329 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 CDADC1Q9BWV3 514 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 RNF112Q9ULX5 631 aa9.1□□□□□ -0.95
CHL1-209ENST00000461289 L1CAMP32004 1257 aa9.09□□□□□ -0.95
CHL1-209ENST00000461289 SUMO1P63165 101 aaKnown RBP9.09□□□□□ -0.95
CHL1-209ENST00000461289 MSMPQ1L6U9 139 aa9.09□□□□□ -0.95
CHL1-209ENST00000461289 FAM209AQ5JX71 171 aa9.09□□□□□ -0.95
CHL1-209ENST00000461289 C16orf86Q6ZW13 317 aa9.09□□□□□ -0.95
CHL1-209ENST00000461289 JMYQ8N9B5 988 aa9.09□□□□□ -0.95
CHL1-209ENST00000461289 DHRS4Q9BTZ2 278 aa9.09□□□□□ -0.95
CHL1-209ENST00000461289 CYP26B1Q9NR63 512 aa9.09□□□□□ -0.95
CHL1-209ENST00000461289 SLC5A6Q9Y289 635 aa9.09□□□□□ -0.95
CHL1-209ENST00000461289 BACE2Q9Y5Z0 518 aa9.09□□□□□ -0.95
CHL1-209ENST00000461289 CCDC163A0A0D9SF12 145 aa9.08□□□□□ -0.96
CHL1-209ENST00000461289 C2orf71A6NGG8 1288 aa9.08□□□□□ -0.96
CHL1-209ENST00000461289 ASMTLO95671 621 aa9.08□□□□□ -0.96
CHL1-209ENST00000461289 CPP00450 1065 aa9.08□□□□□ -0.96
CHL1-209ENST00000461289 RPL10P27635 214 aaKnown RBP9.08□□□□□ -0.96
CHL1-209ENST00000461289 SSTR4P31391 388 aa9.08□□□□□ -0.96
CHL1-209ENST00000461289 SCRN1Q12765 414 aa9.08□□□□□ -0.96
CHL1-209ENST00000461289 TCEA2Q15560 299 aa9.08□□□□□ -0.96
CHL1-209ENST00000461289 ANGEL2Q5VTE6 544 aaKnown RBP9.08□□□□□ -0.96
CHL1-209ENST00000461289 USHBP1Q8N6Y0 703 aa9.08□□□□□ -0.96
CHL1-209ENST00000461289 ANGEL1Q9UNK9 670 aaKnown RBP9.08□□□□□ -0.96
CHL1-209ENST00000461289 CADPSQ9ULU8 1353 aa9.08□□□□□ -0.96
CHL1-209ENST00000461289 AURKAO14965 403 aa9.07□□□□□ -0.96
CHL1-209ENST00000461289 ZNF205O95201 554 aa9.07□□□□□ -0.96
CHL1-209ENST00000461289 IFNGR1P15260 489 aa9.07□□□□□ -0.96
CHL1-209ENST00000461289 BNIP3Q12983 259 aa9.07□□□□□ -0.96
CHL1-209ENST00000461289 FOXB2Q5VYV0 432 aa9.07□□□□□ -0.96
CHL1-209ENST00000461289 WAPLQ7Z5K2 1190 aa9.07□□□□□ -0.96
CHL1-209ENST00000461289 SYNPOQ8N3V7 929 aa9.07□□□□□ -0.96
CHL1-209ENST00000461289 FCRL3Q96P31 734 aaPredicted RBP9.07□□□□□ -0.96
CHL1-209ENST00000461289 SLC12A9Q9BXP2 914 aa9.07□□□□□ -0.96
CHL1-209ENST00000461289 MRPS23Q9Y3D9 190 aaKnown RBP9.07□□□□□ -0.96
CHL1-209ENST00000461289 CD96P40200 585 aa9.06□□□□□ -0.96
CHL1-209ENST00000461289 GFRA1P56159 465 aa9.06□□□□□ -0.96
CHL1-209ENST00000461289 SF1Q15637 639 aaKnown RBP9.06□□□□□ -0.96
CHL1-209ENST00000461289 EEF1DP3Q658K8 133 aa9.06□□□□□ -0.96
CHL1-209ENST00000461289 VSIG10LQ86VR7 867 aa9.06□□□□□ -0.96
CHL1-209ENST00000461289 OSBP2Q969R2 916 aa9.06□□□□□ -0.96
CHL1-209ENST00000461289 EXOC2Q96KP1 924 aa9.06□□□□□ -0.96
CHL1-209ENST00000461289 CARS2Q9HA77 564 aaKnown RBP9.06□□□□□ -0.96
CHL1-209ENST00000461289 AP5S1Q9NUS5 200 aa9.06□□□□□ -0.96
CHL1-209ENST00000461289 ESR1P03372 595 aa9.05□□□□□ -0.96
CHL1-209ENST00000461289 APPP05067 770 aa9.05□□□□□ -0.96
CHL1-209ENST00000461289 MAP4K2Q12851 820 aa9.05□□□□□ -0.96
CHL1-209ENST00000461289 USP53Q70EK8 1073 aa9.05□□□□□ -0.96
CHL1-209ENST00000461289 TMEM145Q8NBT3 493 aa9.05□□□□□ -0.96
CHL1-209ENST00000461289 FLCNQ8NFG4 579 aa9.05□□□□□ -0.96
CHL1-209ENST00000461289 BCL7CQ8WUZ0 217 aaPredicted RBP9.05□□□□□ -0.96
CHL1-209ENST00000461289 FEZ1Q99689 392 aa9.05□□□□□ -0.96
CHL1-209ENST00000461289 DLX3O60479 287 aa9.04□□□□□ -0.96
CHL1-209ENST00000461289 ZP2Q05996 745 aa9.04□□□□□ -0.96
CHL1-209ENST00000461289 PLEKHG4Q58EX7 1191 aa9.04□□□□□ -0.96
CHL1-209ENST00000461289 RCSD1Q6JBY9 416 aa9.04□□□□□ -0.96
CHL1-209ENST00000461289 MCMBPQ9BTE3 642 aa9.04□□□□□ -0.96
CHL1-209ENST00000461289 DNAJC25-GNG10A0A024R161 153 aa9.03□□□□□ -0.96
CHL1-209ENST00000461289 MEFVO15553 781 aaPredicted RBP9.03□□□□□ -0.96
CHL1-209ENST00000461289 ADAM23O75077 832 aa9.03□□□□□ -0.96
CHL1-209ENST00000461289 THBDP07204 575 aa9.03□□□□□ -0.96
CHL1-209ENST00000461289 TEKQ02763 1124 aa9.03□□□□□ -0.96
CHL1-209ENST00000461289 PRSS53Q2L4Q9 553 aa9.03□□□□□ -0.96
CHL1-209ENST00000461289 EGFLAMQ63HQ2 1017 aa9.03□□□□□ -0.96
CHL1-209ENST00000461289 PPIL6Q8IXY8 311 aa9.03□□□□□ -0.96
CHL1-209ENST00000461289 GPRC5CQ9NQ84 441 aa9.03□□□□□ -0.96
CHL1-209ENST00000461289 PCMTD2Q9NV79 361 aa9.03□□□□□ -0.96
CHL1-209ENST00000461289 LMCD1Q9NZU5 365 aa9.03□□□□□ -0.96
CHL1-209ENST00000461289 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.03□□□□□ -0.96
CHL1-209ENST00000461289 TRBV23OR9-2A0A075B6M9 112 aa9.02□□□□□ -0.97
CHL1-209ENST00000461289 NPHP3-ACAD11A0A0J9YXS1 232 aa9.02□□□□□ -0.97
CHL1-209ENST00000461289 PPP1R12AO14974 1030 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms