RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 ZNF468Q5VIY5 522 aaPredicted RBP8.54□□□□□ -1.04
NUP50-212ENST00000461194 ANGEL2Q5VTE6 544 aaKnown RBP8.54□□□□□ -1.04
NUP50-212ENST00000461194 ZNF438Q7Z4V0 828 aa8.54□□□□□ -1.04
NUP50-212ENST00000461194 ITPRIPQ8IWB1 547 aa8.54□□□□□ -1.04
NUP50-212ENST00000461194 ELP3Q9H9T3 547 aa8.54□□□□□ -1.04
NUP50-212ENST00000461194 KLF15Q9UIH9 416 aa8.54□□□□□ -1.04
NUP50-212ENST00000461194 DCTN4Q9UJW0 460 aa8.54□□□□□ -1.04
NUP50-212ENST00000461194 RCAN3Q9UKA8 241 aa8.54□□□□□ -1.04
NUP50-212ENST00000461194 ABT1Q9ULW3 272 aaKnown RBP8.54□□□□□ -1.04
NUP50-212ENST00000461194 JAG2Q9Y219 1238 aa8.54□□□□□ -1.04
NUP50-212ENST00000461194 PITPNM2Q9BZ72 1349 aa8.54□□□□□ -1.04
NUP50-212ENST00000461194 PNMA6EA0A0J9YXQ4 647 aa8.53□□□□□ -1.04
NUP50-212ENST00000461194 ADM5C9JUS6 153 aa8.53□□□□□ -1.04
NUP50-212ENST00000461194 RARAP10276 462 aa8.53□□□□□ -1.04
NUP50-212ENST00000461194 ARAFP10398 606 aa8.53□□□□□ -1.04
NUP50-212ENST00000461194 ATP2B3Q16720 1220 aa8.53□□□□□ -1.04
NUP50-212ENST00000461194 NBPF9Q3BBW0 867 aa8.53□□□□□ -1.04
NUP50-212ENST00000461194 MFSD14BQ5SR56 506 aa8.53□□□□□ -1.04
NUP50-212ENST00000461194 TTC39BQ5VTQ0 682 aaPredicted RBP8.53□□□□□ -1.04
NUP50-212ENST00000461194 GJD3Q8N144 294 aa8.53□□□□□ -1.04
NUP50-212ENST00000461194 ZBED3Q96IU2 234 aaPredicted RBP8.53□□□□□ -1.04
NUP50-212ENST00000461194 OXCT2Q9BYC2 517 aaPredicted RBP8.53□□□□□ -1.04
NUP50-212ENST00000461194 F8W031 263 aaPredicted RBP8.52□□□□□ -1.05
NUP50-212ENST00000461194 FRAT2O75474 233 aaPredicted RBP8.52□□□□□ -1.05
NUP50-212ENST00000461194 ADH6P28332 368 aa8.52□□□□□ -1.05
NUP50-212ENST00000461194 ATP8B2P98198 1209 aa8.52□□□□□ -1.05
NUP50-212ENST00000461194 DLGAP5Q15398 846 aa8.52□□□□□ -1.05
NUP50-212ENST00000461194 DLK2Q6UY11 383 aa8.52□□□□□ -1.05
NUP50-212ENST00000461194 SAPCD2Q86UD0 394 aa8.52□□□□□ -1.05
NUP50-212ENST00000461194 PANK1Q8TE04 598 aa8.52□□□□□ -1.05
NUP50-212ENST00000461194 TBC1D22AQ8WUA7 517 aa8.52□□□□□ -1.05
NUP50-212ENST00000461194 ACDQ96AP0 544 aa8.52□□□□□ -1.05
NUP50-212ENST00000461194 HHIPL1Q96JK4 782 aa8.52□□□□□ -1.05
NUP50-212ENST00000461194 CITED4Q96RK1 184 aa8.52□□□□□ -1.05
NUP50-212ENST00000461194 ZNF408Q9H9D4 720 aa8.52□□□□□ -1.05
NUP50-212ENST00000461194 EFCC1Q9HA90 598 aa8.52□□□□□ -1.05
NUP50-212ENST00000461194 PSME4Q14997 1843 aa8.52□□□□□ -1.05
NUP50-212ENST00000461194 A0A1B0GUL6 1792 aa8.51□□□□□ -1.05
NUP50-212ENST00000461194 MAP3K6O95382 1288 aa8.51□□□□□ -1.05
NUP50-212ENST00000461194 SLURP2P0DP57 97 aa8.51□□□□□ -1.05
NUP50-212ENST00000461194 EHHADHQ08426 723 aa8.51□□□□□ -1.05
NUP50-212ENST00000461194 TFCP2Q12800 502 aa8.51□□□□□ -1.05
NUP50-212ENST00000461194 CHAF1AQ13111 956 aaPredicted RBP8.51□□□□□ -1.05
NUP50-212ENST00000461194 G3BP1Q13283 466 aaKnown RBP eCLIP8.51□□□□□ -1.05
NUP50-212ENST00000461194 MVPQ14764 893 aaKnown RBP8.51□□□□□ -1.05
NUP50-212ENST00000461194 CFAP100Q494V2 611 aa8.51□□□□□ -1.05
NUP50-212ENST00000461194 TMCO4Q5TGY1 634 aa8.51□□□□□ -1.05
NUP50-212ENST00000461194 PDE12Q6L8Q7 609 aaKnown RBP8.51□□□□□ -1.05
NUP50-212ENST00000461194 SSH3Q8TE77 659 aa8.51□□□□□ -1.05
NUP50-212ENST00000461194 CDCA5Q96FF9 252 aa8.51□□□□□ -1.05
NUP50-212ENST00000461194 GNL3LQ9NVN8 582 aaKnown RBP8.51□□□□□ -1.05
NUP50-212ENST00000461194 TMEM63CQ9P1W3 806 aa8.51□□□□□ -1.05
NUP50-212ENST00000461194 TTF2Q9UNY4 1162 aaKnown RBP8.51□□□□□ -1.05
NUP50-212ENST00000461194 AKAP2Q9Y2D5 859 aa8.51□□□□□ -1.05
NUP50-212ENST00000461194 SUGT1Q9Y2Z0 365 aa8.51□□□□□ -1.05
NUP50-212ENST00000461194 A0A1B0GUL7 405 aa8.5□□□□□ -1.05
NUP50-212ENST00000461194 MYO1BO43795 1136 aa8.5□□□□□ -1.05
NUP50-212ENST00000461194 MMP20O60882 483 aa8.5□□□□□ -1.05
NUP50-212ENST00000461194 SIN3BO75182 1162 aa8.5□□□□□ -1.05
NUP50-212ENST00000461194 ECE1P42892 770 aa8.5□□□□□ -1.05
NUP50-212ENST00000461194 TIMM10P62072 90 aa8.5□□□□□ -1.05
NUP50-212ENST00000461194 HDLBPQ00341 1268 aaKnown RBP8.5□□□□□ -1.05
NUP50-212ENST00000461194 GRIK5Q16478 980 aa8.5□□□□□ -1.05
NUP50-212ENST00000461194 CEP85Q6P2H3 762 aa8.5□□□□□ -1.05
NUP50-212ENST00000461194 TMC7Q7Z402 723 aa8.5□□□□□ -1.05
NUP50-212ENST00000461194 APOBEC3FQ8IUX4 373 aaKnown RBP8.5□□□□□ -1.05
NUP50-212ENST00000461194 C2orf69Q8N8R5 385 aa8.5□□□□□ -1.05
NUP50-212ENST00000461194 WDR66Q8TBY9 1149 aa8.5□□□□□ -1.05
NUP50-212ENST00000461194 CAPNS2Q96L46 248 aa8.5□□□□□ -1.05
NUP50-212ENST00000461194 PRMT6Q96LA8 375 aaPredicted RBP8.5□□□□□ -1.05
NUP50-212ENST00000461194 MRIQ9BWK5 157 aa8.5□□□□□ -1.05
NUP50-212ENST00000461194 RBCK1Q9BYM8 510 aa8.5□□□□□ -1.05
NUP50-212ENST00000461194 GBA2Q9HCG7 927 aaPredicted RBP8.5□□□□□ -1.05
NUP50-212ENST00000461194 DDX19BQ9UMR2 479 aa8.5□□□□□ -1.05
NUP50-212ENST00000461194 SCAF8Q9UPN6 1271 aaKnown RBP8.5□□□□□ -1.05
NUP50-212ENST00000461194 PCDHAC2Q9Y5I4 1007 aa8.5□□□□□ -1.05
NUP50-212ENST00000461194 WDR33Q9C0J8 1336 aaKnown RBP8.5□□□□□ -1.05
NUP50-212ENST00000461194 ZNF646O15015 1829 aaPredicted RBP8.5□□□□□ -1.05
NUP50-212ENST00000461194 SURF6O75683 361 aaKnown RBP8.49□□□□□ -1.05
NUP50-212ENST00000461194 ADORA1P30542 326 aa8.49□□□□□ -1.05
NUP50-212ENST00000461194 PHKA1P46020 1223 aa8.49□□□□□ -1.05
NUP50-212ENST00000461194 CRKP46108 304 aa8.49□□□□□ -1.05
NUP50-212ENST00000461194 RBM5P52756 815 aaKnown RBP eCLIP8.49□□□□□ -1.05
NUP50-212ENST00000461194 HUNKP57058 714 aa8.49□□□□□ -1.05
NUP50-212ENST00000461194 FKBP1BP68106 108 aa8.49□□□□□ -1.05
NUP50-212ENST00000461194 PDE3AQ14432 1141 aa8.49□□□□□ -1.05
NUP50-212ENST00000461194 CYP4F22Q6NT55 531 aa8.49□□□□□ -1.05
NUP50-212ENST00000461194 LYPD4Q6UWN0 246 aa8.49□□□□□ -1.05
NUP50-212ENST00000461194 XKR5Q6UX68 686 aa8.49□□□□□ -1.05
NUP50-212ENST00000461194 ZSCAN29Q8IWY8 852 aaPredicted RBP8.49□□□□□ -1.05
NUP50-212ENST00000461194 GOLGA6L1Q8N7Z2 621 aa8.49□□□□□ -1.05
NUP50-212ENST00000461194 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.49□□□□□ -1.05
NUP50-212ENST00000461194 WHAMMQ8TF30 809 aa8.49□□□□□ -1.05
NUP50-212ENST00000461194 UBE2OQ9C0C9 1292 aaKnown RBP8.49□□□□□ -1.05
NUP50-212ENST00000461194 NIF3L1Q9GZT8 377 aa8.49□□□□□ -1.05
NUP50-212ENST00000461194 AVENQ9NQS1 362 aaPredicted RBP8.49□□□□□ -1.05
NUP50-212ENST00000461194 ABI2Q9NYB9 513 aaPredicted RBP8.49□□□□□ -1.05
NUP50-212ENST00000461194 TLR7Q9NYK1 1049 aaKnown RBP8.49□□□□□ -1.05
NUP50-212ENST00000461194 GDF2Q9UK05 429 aaPredicted RBP8.49□□□□□ -1.05
NUP50-212ENST00000461194 DENND2AQ9ULE3 1009 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms