RNA–Protein interactions for RNA: ENST00000460231.5

PCNP-202, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best)

Gene PCNP, Length 2,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-202ENST00000460231 USP17L18D6R9N7 530 aa16.47■□□□□ 0.23
PCNP-202ENST00000460231 USP17L22D6RA61 530 aa16.47■□□□□ 0.23
PCNP-202ENST00000460231 USP17L17D6RBQ6 530 aa16.47■□□□□ 0.23
PCNP-202ENST00000460231 USP17L19D6RCP7 530 aa16.47■□□□□ 0.23
PCNP-202ENST00000460231 USP17L20D6RJB6 530 aa16.47■□□□□ 0.23
PCNP-202ENST00000460231 GOLGA6L22H0YM25 854 aa16.47■□□□□ 0.23
PCNP-202ENST00000460231 STAT2P52630 851 aa16.47■□□□□ 0.23
PCNP-202ENST00000460231 USP17L24Q0WX57 530 aa16.47■□□□□ 0.23
PCNP-202ENST00000460231 SPECC1Q5M775 1068 aa16.47■□□□□ 0.23
PCNP-202ENST00000460231 JAKMIP3Q5VZ66 844 aa16.47■□□□□ 0.23
PCNP-202ENST00000460231 USP17L6PQ6QN14 398 aa16.47■□□□□ 0.23
PCNP-202ENST00000460231 BTNL9Q6UXG8 535 aa16.47■□□□□ 0.23
PCNP-202ENST00000460231 AFG3L2Q9Y4W6 797 aa16.47■□□□□ 0.23
PCNP-202ENST00000460231 PTPRFP10586 1907 aa16.46■□□□□ 0.23
PCNP-202ENST00000460231 IQCA1LA6NCM1 817 aa16.46■□□□□ 0.23
PCNP-202ENST00000460231 PDIA4P13667 645 aaKnown RBP16.46■□□□□ 0.23
PCNP-202ENST00000460231 NASPP49321 788 aaPredicted RBP16.46■□□□□ 0.23
PCNP-202ENST00000460231 BACE1P56817 501 aa16.46■□□□□ 0.23
PCNP-202ENST00000460231 ZNF280CQ8ND82 737 aa16.46■□□□□ 0.23
PCNP-202ENST00000460231 ZC3H15Q8WU90 426 aaKnown RBP16.46■□□□□ 0.23
PCNP-202ENST00000460231 PARP14Q460N5 1801 aa16.46■□□□□ 0.22
PCNP-202ENST00000460231 SAFBQ15424 915 aaKnown RBP eCLIP16.45■□□□□ 0.22
PCNP-202ENST00000460231 ZNF174Q15697 407 aa16.45■□□□□ 0.22
PCNP-202ENST00000460231 INF2Q27J81 1249 aa16.45■□□□□ 0.22
PCNP-202ENST00000460231 KLHL40Q2TBA0 621 aa16.45■□□□□ 0.22
PCNP-202ENST00000460231 PICK1Q9NRD5 415 aa16.45■□□□□ 0.22
PCNP-202ENST00000460231 POLR3EQ9NVU0 708 aa16.45■□□□□ 0.22
PCNP-202ENST00000460231 IRF6O14896 467 aa16.45■□□□□ 0.22
PCNP-202ENST00000460231 GJA5P36382 358 aa16.45■□□□□ 0.22
PCNP-202ENST00000460231 AXDND1Q5T1B0 1012 aaPredicted RBP16.45■□□□□ 0.22
PCNP-202ENST00000460231 PIAS4Q8N2W9 510 aaPredicted RBP16.45■□□□□ 0.22
PCNP-202ENST00000460231 AGBL1Q96MI9 1066 aa16.45■□□□□ 0.22
PCNP-202ENST00000460231 SCAND2PQ9GZW5 306 aaPredicted RBP16.45■□□□□ 0.22
PCNP-202ENST00000460231 RPAP3Q9H6T3 665 aaPredicted RBP16.45■□□□□ 0.22
PCNP-202ENST00000460231 SH3GLB2Q9NR46 395 aa16.45■□□□□ 0.22
PCNP-202ENST00000460231 PCDHA1Q9Y5I3 950 aa16.45■□□□□ 0.22
PCNP-202ENST00000460231 ZNF536O15090 1300 aa16.45■□□□□ 0.22
PCNP-202ENST00000460231 ELP1O95163 1332 aa16.44■□□□□ 0.22
PCNP-202ENST00000460231 XBP1P17861 261 aa16.44■□□□□ 0.22
PCNP-202ENST00000460231 MAP3K9P80192 1104 aa16.44■□□□□ 0.22
PCNP-202ENST00000460231 PPP4R3BQ5MIZ7 849 aa16.44■□□□□ 0.22
PCNP-202ENST00000460231 TREML2Q5T2D2 321 aa16.44■□□□□ 0.22
PCNP-202ENST00000460231 OTUD5Q96G74 571 aa16.44■□□□□ 0.22
PCNP-202ENST00000460231 UIMC1Q96RL1 719 aa16.44■□□□□ 0.22
PCNP-202ENST00000460231 WDR18Q9BV38 432 aa16.44■□□□□ 0.22
PCNP-202ENST00000460231 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.44■□□□□ 0.22
PCNP-202ENST00000460231 NR1I2O75469 434 aa16.44■□□□□ 0.22
PCNP-202ENST00000460231 UBE2HP62256 183 aa16.44■□□□□ 0.22
PCNP-202ENST00000460231 TTLL12Q14166 644 aaPredicted RBP16.44■□□□□ 0.22
PCNP-202ENST00000460231 NOL9Q5SY16 702 aaKnown RBP16.44■□□□□ 0.22
PCNP-202ENST00000460231 TANGO6Q9C0B7 1094 aa16.44■□□□□ 0.22
PCNP-202ENST00000460231 HOXA13P31271 388 aaPredicted RBP16.43■□□□□ 0.22
PCNP-202ENST00000460231 ME1P48163 572 aa16.43■□□□□ 0.22
PCNP-202ENST00000460231 SLC39A14Q15043 492 aa16.43■□□□□ 0.22
PCNP-202ENST00000460231 IL17AQ16552 155 aa16.43■□□□□ 0.22
PCNP-202ENST00000460231 USP49Q70CQ1 688 aa16.43■□□□□ 0.22
PCNP-202ENST00000460231 ZNF396Q96N95 335 aaPredicted RBP16.43■□□□□ 0.22
PCNP-202ENST00000460231 CFAP45Q9UL16 551 aa16.43■□□□□ 0.22
PCNP-202ENST00000460231 MEIS2O14770 477 aa16.43■□□□□ 0.22
PCNP-202ENST00000460231 SPTLC2O15270 562 aa16.43■□□□□ 0.22
PCNP-202ENST00000460231 STK38Q15208 465 aa16.43■□□□□ 0.22
PCNP-202ENST00000460231 PNMA8AQ86V59 439 aaPredicted RBP16.43■□□□□ 0.22
PCNP-202ENST00000460231 DAGLBQ8NCG7 672 aa16.43■□□□□ 0.22
PCNP-202ENST00000460231 RGS22Q8NE09 1264 aa16.43■□□□□ 0.22
PCNP-202ENST00000460231 GJA10Q969M2 543 aa16.43■□□□□ 0.22
PCNP-202ENST00000460231 R3HDMLQ9H3Y0 253 aa16.43■□□□□ 0.22
PCNP-202ENST00000460231 SYNPO2Q9UMS6 1093 aa16.43■□□□□ 0.22
PCNP-202ENST00000460231 COL11A1P12107 1806 aaPredicted RBP16.42■□□□□ 0.22
PCNP-202ENST00000460231 MYH7BA7E2Y1 1941 aa16.42■□□□□ 0.22
PCNP-202ENST00000460231 A0A1B0GVL5 298 aa16.42■□□□□ 0.22
PCNP-202ENST00000460231 PPP1R12BO60237 982 aaPredicted RBP16.42■□□□□ 0.22
PCNP-202ENST00000460231 MCM7P33993 719 aa16.42■□□□□ 0.22
PCNP-202ENST00000460231 GAS2L3Q86XJ1 694 aa16.42■□□□□ 0.22
PCNP-202ENST00000460231 ATG4CQ96DT6 458 aa16.42■□□□□ 0.22
PCNP-202ENST00000460231 TMEM60Q9H2L4 133 aa16.42■□□□□ 0.22
PCNP-202ENST00000460231 RANBP17Q9H2T7 1088 aaKnown RBP16.42■□□□□ 0.22
PCNP-202ENST00000460231 FLOT1O75955 427 aa16.41■□□□□ 0.22
PCNP-202ENST00000460231 CLK2P49760 499 aaKnown RBP16.41■□□□□ 0.22
PCNP-202ENST00000460231 MKRN3Q13064 507 aaKnown RBP16.41■□□□□ 0.22
PCNP-202ENST00000460231 SHC4Q6S5L8 630 aa16.41■□□□□ 0.22
PCNP-202ENST00000460231 ERCC4Q92889 916 aaPredicted RBP16.41■□□□□ 0.22
PCNP-202ENST00000460231 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.41■□□□□ 0.22
PCNP-202ENST00000460231 ADCY7P51828 1080 aa16.41■□□□□ 0.22
PCNP-202ENST00000460231 FBXO11Q86XK2 927 aa16.41■□□□□ 0.22
PCNP-202ENST00000460231 CPXCR1Q8N123 301 aa16.41■□□□□ 0.22
PCNP-202ENST00000460231 ZFP91Q96JP5 570 aaPredicted RBP16.41■□□□□ 0.22
PCNP-202ENST00000460231 PSTPIP2Q9H939 334 aa16.41■□□□□ 0.22
PCNP-202ENST00000460231 RAVER2Q9HCJ3 691 aaKnown RBP16.41■□□□□ 0.22
PCNP-202ENST00000460231 RIPK3Q9Y572 518 aa16.41■□□□□ 0.22
PCNP-202ENST00000460231 HTTP42858 3142 aa16.4■□□□□ 0.22
PCNP-202ENST00000460231 WDR46O15213 610 aaKnown RBP16.4■□□□□ 0.22
PCNP-202ENST00000460231 YEATS4O95619 227 aa16.4■□□□□ 0.22
PCNP-202ENST00000460231 CALML3P27482 149 aa16.4■□□□□ 0.22
PCNP-202ENST00000460231 SNW1Q13573 536 aaKnown RBP16.4■□□□□ 0.22
PCNP-202ENST00000460231 CAMK4Q16566 473 aa16.4■□□□□ 0.22
PCNP-202ENST00000460231 RILPL1Q5EBL4 403 aa16.4■□□□□ 0.22
PCNP-202ENST00000460231 TTC38Q5R3I4 469 aa16.4■□□□□ 0.22
PCNP-202ENST00000460231 CST9Q5W186 159 aa16.4■□□□□ 0.22
PCNP-202ENST00000460231 C4orf32Q8N8J7 132 aa16.4■□□□□ 0.22
PCNP-202ENST00000460231 CCDC148Q8NFR7 591 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms