RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 TUBB4AP04350 444 aa20.43■□□□□ 0.86
HPS3-202ENST00000460120 TRIM47Q96LD4 638 aa20.43■□□□□ 0.86
HPS3-202ENST00000460120 MXD3Q9BW11 206 aa20.43■□□□□ 0.86
HPS3-202ENST00000460120 TFR2Q9UP52 801 aa20.43■□□□□ 0.86
HPS3-202ENST00000460120 PALM3A6NDB9 673 aaPredicted RBP20.43■□□□□ 0.86
HPS3-202ENST00000460120 PLCG1P19174 1290 aa20.43■□□□□ 0.86
HPS3-202ENST00000460120 ERCC3P19447 782 aa20.43■□□□□ 0.86
HPS3-202ENST00000460120 ERVK-24P63145 666 aa20.43■□□□□ 0.86
HPS3-202ENST00000460120 TXNRD1Q16881 649 aa20.43■□□□□ 0.86
HPS3-202ENST00000460120 ANKRD20A12PQ8NF67 263 aa20.43■□□□□ 0.86
HPS3-202ENST00000460120 SLF1Q9BQI6 1058 aa20.43■□□□□ 0.86
HPS3-202ENST00000460120 SRRTQ9BXP5 876 aaKnown RBP20.43■□□□□ 0.86
HPS3-202ENST00000460120 RMND1Q9NWS8 449 aa20.43■□□□□ 0.86
HPS3-202ENST00000460120 GOLGA6L9A6NEM1 432 aa20.42■□□□□ 0.86
HPS3-202ENST00000460120 M0R2N6 131 aa20.42■□□□□ 0.86
HPS3-202ENST00000460120 GTF2IP78347 998 aa20.42■□□□□ 0.86
HPS3-202ENST00000460120 POLLQ9UGP5 575 aa20.42■□□□□ 0.86
HPS3-202ENST00000460120 KRT9P35527 623 aa20.42■□□□□ 0.86
HPS3-202ENST00000460120 ATP2B2Q01814 1243 aa20.42■□□□□ 0.86
HPS3-202ENST00000460120 ZNF771Q7L3S4 317 aaPredicted RBP20.42■□□□□ 0.86
HPS3-202ENST00000460120 COA7Q96BR5 231 aa20.42■□□□□ 0.86
HPS3-202ENST00000460120 SH3GLB2Q9NR46 395 aa20.42■□□□□ 0.86
HPS3-202ENST00000460120 SEC63Q9UGP8 760 aaKnown RBP20.42■□□□□ 0.86
HPS3-202ENST00000460120 MRFAP1Q9Y605 127 aa20.42■□□□□ 0.86
HPS3-202ENST00000460120 LAMB1P07942 1786 aa20.42■□□□□ 0.86
HPS3-202ENST00000460120 SERPINB2P05120 415 aa20.41■□□□□ 0.86
HPS3-202ENST00000460120 MAP3K9P80192 1104 aa20.41■□□□□ 0.86
HPS3-202ENST00000460120 SOGA3Q5TF21 947 aa20.41■□□□□ 0.86
HPS3-202ENST00000460120 CABP7Q86V35 215 aa20.41■□□□□ 0.86
HPS3-202ENST00000460120 CNGA4Q8IV77 575 aa20.41■□□□□ 0.86
HPS3-202ENST00000460120 CHP1Q99653 195 aa20.41■□□□□ 0.86
HPS3-202ENST00000460120 GPCPD1Q9NPB8 672 aa20.41■□□□□ 0.86
HPS3-202ENST00000460120 ABHD10Q9NUJ1 306 aa20.41■□□□□ 0.86
HPS3-202ENST00000460120 DLEC1Q9Y238 1755 aa20.41■□□□□ 0.86
HPS3-202ENST00000460120 BTAF1O14981 1849 aa20.41■□□□□ 0.86
HPS3-202ENST00000460120 TXKP42681 527 aa20.41■□□□□ 0.86
HPS3-202ENST00000460120 MEX3CQ5U5Q3 659 aaKnown RBP20.41■□□□□ 0.86
HPS3-202ENST00000460120 LIMA1Q9UHB6 759 aaKnown RBP20.41■□□□□ 0.86
HPS3-202ENST00000460120 KIF5CO60282 957 aa20.4■□□□□ 0.86
HPS3-202ENST00000460120 TMCO3Q6UWJ1 677 aa20.4■□□□□ 0.86
HPS3-202ENST00000460120 TBCKQ8TEA7 893 aa20.4■□□□□ 0.86
HPS3-202ENST00000460120 RRP36Q96EU6 259 aaKnown RBP20.4■□□□□ 0.86
HPS3-202ENST00000460120 TRIM10Q9UDY6 481 aa20.4■□□□□ 0.86
HPS3-202ENST00000460120 PPP4CP60510 307 aa20.4■□□□□ 0.86
HPS3-202ENST00000460120 ASIC1P78348 528 aa20.4■□□□□ 0.86
HPS3-202ENST00000460120 POTEDQ86YR6 584 aa20.4■□□□□ 0.86
HPS3-202ENST00000460120 IRF2BP1Q8IU81 584 aa20.4■□□□□ 0.86
HPS3-202ENST00000460120 TCP11L1Q9NUJ3 509 aa20.4■□□□□ 0.86
HPS3-202ENST00000460120 LTBP4Q8N2S1 1624 aa20.4■□□□□ 0.86
HPS3-202ENST00000460120 EFCAB8A8MWE9 144 aa20.4■□□□□ 0.86
HPS3-202ENST00000460120 FCER1AP12319 257 aa20.4■□□□□ 0.86
HPS3-202ENST00000460120 KLK7P49862 253 aa20.4■□□□□ 0.86
HPS3-202ENST00000460120 NONOQ15233 471 aaKnown RBP eCLIP20.4■□□□□ 0.86
HPS3-202ENST00000460120 KIF4BQ2VIQ3 1234 aa20.4■□□□□ 0.86
HPS3-202ENST00000460120 ADSSL1Q8N142 457 aa20.4■□□□□ 0.86
HPS3-202ENST00000460120 SLC35F6Q8N357 371 aa20.4■□□□□ 0.86
HPS3-202ENST00000460120 CCDC88AQ3V6T2 1871 aa20.39■□□□□ 0.86
HPS3-202ENST00000460120 B4DLN1 442 aa20.39■□□□□ 0.85
HPS3-202ENST00000460120 ST5P78524 1137 aa20.39■□□□□ 0.85
HPS3-202ENST00000460120 C16orf86Q6ZW13 317 aa20.39■□□□□ 0.85
HPS3-202ENST00000460120 ANKS1AQ92625 1134 aa20.39■□□□□ 0.85
HPS3-202ENST00000460120 GJA10Q969M2 543 aa20.39■□□□□ 0.85
HPS3-202ENST00000460120 PCMTD1Q96MG8 357 aaPredicted RBP20.39■□□□□ 0.85
HPS3-202ENST00000460120 PYM1Q9BRP8 204 aaKnown RBP20.39■□□□□ 0.85
HPS3-202ENST00000460120 OR52Z1P0C646 297 aa20.39■□□□□ 0.85
HPS3-202ENST00000460120 SCNN1DP51172 638 aa20.39■□□□□ 0.85
HPS3-202ENST00000460120 PDE4DQ08499 809 aa20.39■□□□□ 0.85
HPS3-202ENST00000460120 CT47A1Q5JQC4 288 aaPredicted RBP20.39■□□□□ 0.85
HPS3-202ENST00000460120 FHOD1Q9Y613 1164 aa20.39■□□□□ 0.85
HPS3-202ENST00000460120 SNED1Q8TER0 1413 aa20.38■□□□□ 0.85
HPS3-202ENST00000460120 NKRFO15226 690 aaKnown RBP eCLIP20.38■□□□□ 0.85
HPS3-202ENST00000460120 KLRC4O43908 158 aa20.38■□□□□ 0.85
HPS3-202ENST00000460120 GYS1P13807 737 aa20.38■□□□□ 0.85
HPS3-202ENST00000460120 C6orf50Q9HD87 102 aa20.38■□□□□ 0.85
HPS3-202ENST00000460120 ARGLU1Q9NWB6 273 aaPredicted RBP20.38■□□□□ 0.85
HPS3-202ENST00000460120 GPR75-ASB3A0A0A6YYF3 556 aa20.38■□□□□ 0.85
HPS3-202ENST00000460120 TTC26A0AVF1 554 aa20.38■□□□□ 0.85
HPS3-202ENST00000460120 PNMA6AP0CW24 399 aaPredicted RBP20.38■□□□□ 0.85
HPS3-202ENST00000460120 RHBDL3P58872 404 aa20.38■□□□□ 0.85
HPS3-202ENST00000460120 DPP8Q6V1X1 898 aaPredicted RBP20.38■□□□□ 0.85
HPS3-202ENST00000460120 TBC1D16Q8TBP0 767 aa20.38■□□□□ 0.85
HPS3-202ENST00000460120 ZNF287Q9HBT7 754 aa20.38■□□□□ 0.85
HPS3-202ENST00000460120 ROBO3Q96MS0 1386 aa20.37■□□□□ 0.85
HPS3-202ENST00000460120 NAA15Q9BXJ9 866 aaKnown RBP20.37■□□□□ 0.85
HPS3-202ENST00000460120 MAGEC2Q9UBF1 373 aaPredicted RBP20.37■□□□□ 0.85
HPS3-202ENST00000460120 SPAG1Q07617 926 aa20.37■□□□□ 0.85
HPS3-202ENST00000460120 STK4Q13043 487 aa20.37■□□□□ 0.85
HPS3-202ENST00000460120 BMS1Q14692 1282 aaKnown RBP20.37■□□□□ 0.85
HPS3-202ENST00000460120 DOK7Q18PE1 504 aa20.37■□□□□ 0.85
HPS3-202ENST00000460120 DYMQ7RTS9 669 aa20.37■□□□□ 0.85
HPS3-202ENST00000460120 NEK8Q86SG6 692 aa20.37■□□□□ 0.85
HPS3-202ENST00000460120 CSGALNACT2Q8N6G5 542 aa20.37■□□□□ 0.85
HPS3-202ENST00000460120 NEDD1Q8NHV4 660 aa20.37■□□□□ 0.85
HPS3-202ENST00000460120 RBM17Q96I25 401 aaKnown RBP20.37■□□□□ 0.85
HPS3-202ENST00000460120 ZMYND12Q9H0C1 365 aa20.37■□□□□ 0.85
HPS3-202ENST00000460120 GUCA1BQ9UMX6 200 aa20.37■□□□□ 0.85
HPS3-202ENST00000460120 PSMA7O14818 248 aa20.36■□□□□ 0.85
HPS3-202ENST00000460120 POLR3GO15318 223 aaPredicted RBP20.36■□□□□ 0.85
HPS3-202ENST00000460120 AKR1B1P15121 316 aa20.36■□□□□ 0.85
HPS3-202ENST00000460120 STIM1Q13586 685 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms