RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 U3KQE9 123 aa7.83□□□□□ -1.16
CCDC50-203ENST00000460064 SSU72P8A0A1W2PR75 194 aa7.82□□□□□ -1.16
CCDC50-203ENST00000460064 WASH4PA8MWX3 477 aa7.82□□□□□ -1.16
CCDC50-203ENST00000460064 H3BS24 57 aa7.82□□□□□ -1.16
CCDC50-203ENST00000460064 CPP00450 1065 aa7.82□□□□□ -1.16
CCDC50-203ENST00000460064 CD3EP07766 207 aa7.82□□□□□ -1.16
CCDC50-203ENST00000460064 IBSPP21815 317 aaPredicted RBP7.82□□□□□ -1.16
CCDC50-203ENST00000460064 TPP2P29144 1249 aaPredicted RBP7.82□□□□□ -1.16
CCDC50-203ENST00000460064 GFRA1P56159 465 aa7.82□□□□□ -1.16
CCDC50-203ENST00000460064 PABPC4Q13310 644 aaKnown RBP eCLIP7.82□□□□□ -1.16
CCDC50-203ENST00000460064 FNDC3BQ53EP0 1204 aaKnown RBP7.82□□□□□ -1.16
CCDC50-203ENST00000460064 CRTC3Q6UUV7 619 aa7.82□□□□□ -1.16
CCDC50-203ENST00000460064 DHX37Q8IY37 1157 aaKnown RBP7.82□□□□□ -1.16
CCDC50-203ENST00000460064 ANKRD13AQ8IZ07 590 aa7.82□□□□□ -1.16
CCDC50-203ENST00000460064 NINJ1Q92982 152 aa7.82□□□□□ -1.16
CCDC50-203ENST00000460064 UBE2FQ969M7 185 aa7.82□□□□□ -1.16
CCDC50-203ENST00000460064 HSPA12BQ96MM6 686 aa7.82□□□□□ -1.16
CCDC50-203ENST00000460064 TMX1Q9H3N1 280 aa7.82□□□□□ -1.16
CCDC50-203ENST00000460064 PLAAQ9Y263 795 aa7.82□□□□□ -1.16
CCDC50-203ENST00000460064 BLACEA4D250 179 aa7.81□□□□□ -1.16
CCDC50-203ENST00000460064 RFPL3O75679 317 aa7.81□□□□□ -1.16
CCDC50-203ENST00000460064 CEACAM5P06731 702 aa7.81□□□□□ -1.16
CCDC50-203ENST00000460064 MASP1P48740 699 aa7.81□□□□□ -1.16
CCDC50-203ENST00000460064 SCRN1Q12765 414 aa7.81□□□□□ -1.16
CCDC50-203ENST00000460064 TSPYL5Q86VY4 417 aaPredicted RBP7.81□□□□□ -1.16
CCDC50-203ENST00000460064 SPACA3Q8IXA5 215 aa7.81□□□□□ -1.16
CCDC50-203ENST00000460064 NIM1KQ8IY84 436 aa7.81□□□□□ -1.16
CCDC50-203ENST00000460064 USHBP1Q8N6Y0 703 aa7.81□□□□□ -1.16
CCDC50-203ENST00000460064 TMEM145Q8NBT3 493 aa7.81□□□□□ -1.16
CCDC50-203ENST00000460064 CLUHP3Q96NS8 147 aa7.81□□□□□ -1.16
CCDC50-203ENST00000460064 FCRL3Q96P31 734 aaPredicted RBP7.81□□□□□ -1.16
CCDC50-203ENST00000460064 MCMBPQ9BTE3 642 aa7.81□□□□□ -1.16
CCDC50-203ENST00000460064 MRPL4Q9BYD3 311 aaKnown RBP7.81□□□□□ -1.16
CCDC50-203ENST00000460064 PLAGL2Q9UPG8 496 aa7.81□□□□□ -1.16
CCDC50-203ENST00000460064 C2orf71A6NGG8 1288 aa7.8□□□□□ -1.16
CCDC50-203ENST00000460064 STXBP3O00186 592 aa7.8□□□□□ -1.16
CCDC50-203ENST00000460064 VAV1P15498 845 aa7.8□□□□□ -1.16
CCDC50-203ENST00000460064 BMP8BP34820 402 aa7.8□□□□□ -1.16
CCDC50-203ENST00000460064 PCBP3P57721 371 aaKnown RBP7.8□□□□□ -1.16
CCDC50-203ENST00000460064 MAP4K2Q12851 820 aa7.8□□□□□ -1.16
CCDC50-203ENST00000460064 CPSF6Q16630 551 aaKnown RBP eCLIP7.8□□□□□ -1.16
CCDC50-203ENST00000460064 PRSS53Q2L4Q9 553 aa7.8□□□□□ -1.16
CCDC50-203ENST00000460064 SLC51AQ86UW1 340 aa7.8□□□□□ -1.16
CCDC50-203ENST00000460064 ZCRB1Q8TBF4 217 aaKnown RBP7.8□□□□□ -1.16
CCDC50-203ENST00000460064 NETO1Q8TDF5 533 aa7.8□□□□□ -1.16
CCDC50-203ENST00000460064 GPATCH3Q96I76 525 aa7.8□□□□□ -1.16
CCDC50-203ENST00000460064 GPRC5CQ9NQ84 441 aa7.8□□□□□ -1.16
CCDC50-203ENST00000460064 IRS4O14654 1257 aaPredicted RBP7.79□□□□□ -1.16
CCDC50-203ENST00000460064 AURKAO14965 403 aa7.79□□□□□ -1.16
CCDC50-203ENST00000460064 SCG5P05408 212 aa7.79□□□□□ -1.16
CCDC50-203ENST00000460064 SYPP08247 313 aa7.79□□□□□ -1.16
CCDC50-203ENST00000460064 IFI16Q16666 785 aaKnown RBP7.79□□□□□ -1.16
CCDC50-203ENST00000460064 NKAPLQ5M9Q1 402 aa7.79□□□□□ -1.16
CCDC50-203ENST00000460064 PLD6Q8N2A8 252 aaKnown RBP7.79□□□□□ -1.16
CCDC50-203ENST00000460064 PIM2Q9P1W9 311 aa7.79□□□□□ -1.16
CCDC50-203ENST00000460064 RNF112Q9ULX5 631 aa7.79□□□□□ -1.16
CCDC50-203ENST00000460064 TMEM265A0A087WTH1 108 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 GSTM1P09488 218 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 MYCLP1P12525 358 aaPredicted RBP7.78□□□□□ -1.16
CCDC50-203ENST00000460064 IFNGR1P15260 489 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 SEPHS1P49903 392 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 CLCN7P51798 805 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 GABREP78334 506 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 RSPO4Q2I0M5 234 aaPredicted RBP7.78□□□□□ -1.16
CCDC50-203ENST00000460064 SLC35F1Q5T1Q4 408 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 USP53Q70EK8 1073 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 THAP5Q7Z6K1 395 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 LINC00116Q8NCU8 138 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 COPS5Q92905 334 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 PTPRN2Q92932 1015 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 MFSD3Q96ES6 412 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 SLC12A9Q9BXP2 914 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 FOXP3Q9BZS1 431 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 SEMA3GQ9NS98 782 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 ZC3H7BQ9UGR2 993 aaKnown RBP7.78□□□□□ -1.16
CCDC50-203ENST00000460064 NDOR1Q9UHB4 597 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 DUSP13Q9UII6 198 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 TCFL5Q9UL49 500 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 COL4A3BPQ9Y5P4 624 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 SNX11Q9Y5W9 270 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 BACE2Q9Y5Z0 518 aa7.78□□□□□ -1.16
CCDC50-203ENST00000460064 hCG_2014768A0A024R1R8 64 aa7.77□□□□□ -1.17
CCDC50-203ENST00000460064 PRR19A6NJB7 356 aa7.77□□□□□ -1.17
CCDC50-203ENST00000460064 MSTNO14793 375 aa7.77□□□□□ -1.17
CCDC50-203ENST00000460064 THBDP07204 575 aa7.77□□□□□ -1.17
CCDC50-203ENST00000460064 C6orf222P0C671 652 aaPredicted RBP7.77□□□□□ -1.17
CCDC50-203ENST00000460064 IGBP1P78318 339 aa7.77□□□□□ -1.17
CCDC50-203ENST00000460064 CYP4F3Q08477 520 aa7.77□□□□□ -1.17
CCDC50-203ENST00000460064 NTRK3Q16288 839 aa7.77□□□□□ -1.17
CCDC50-203ENST00000460064 TM4SF20Q53R12 229 aa7.77□□□□□ -1.17
CCDC50-203ENST00000460064 ZDHHC13Q8IUH4 622 aa7.77□□□□□ -1.17
CCDC50-203ENST00000460064 SLC7A14Q8TBB6 771 aa7.77□□□□□ -1.17
CCDC50-203ENST00000460064 SFMBT1Q9UHJ3 866 aa7.77□□□□□ -1.17
CCDC50-203ENST00000460064 EFCAB14O75071 495 aa7.76□□□□□ -1.17
CCDC50-203ENST00000460064 FOSL1P15407 271 aa7.76□□□□□ -1.17
CCDC50-203ENST00000460064 LTKP29376 864 aa7.76□□□□□ -1.17
CCDC50-203ENST00000460064 TRIM61Q5EBN2 209 aa7.76□□□□□ -1.17
CCDC50-203ENST00000460064 DENND5AQ6IQ26 1287 aa7.76□□□□□ -1.17
CCDC50-203ENST00000460064 CNNM4Q6P4Q7 775 aa7.76□□□□□ -1.17
CCDC50-203ENST00000460064 CREG2Q8IUH2 290 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms