RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 SNRNP48Q6IEG0 339 aaKnown RBP12.64□□□□□ -0.39
CCDC12-204ENST00000460035 PLEKHH3Q7Z736 793 aa12.64□□□□□ -0.39
CCDC12-204ENST00000460035 MICU3Q86XE3 530 aa12.64□□□□□ -0.39
CCDC12-204ENST00000460035 ADGRF4Q8IZF3 695 aa12.64□□□□□ -0.39
CCDC12-204ENST00000460035 SHCBP1Q8NEM2 672 aa12.64□□□□□ -0.39
CCDC12-204ENST00000460035 LARP6Q9BRS8 491 aaKnown RBP12.64□□□□□ -0.39
CCDC12-204ENST00000460035 BACH2Q9BYV9 841 aa12.64□□□□□ -0.39
CCDC12-204ENST00000460035 ZNF214Q9UL59 606 aaPredicted RBP12.64□□□□□ -0.39
CCDC12-204ENST00000460035 COPB2P35606 906 aa12.63□□□□□ -0.39
CCDC12-204ENST00000460035 RBM25P49756 843 aaKnown RBP12.63□□□□□ -0.39
CCDC12-204ENST00000460035 GNAQP50148 359 aa12.63□□□□□ -0.39
CCDC12-204ENST00000460035 NEK4P51957 841 aa12.63□□□□□ -0.39
CCDC12-204ENST00000460035 APOA5Q6Q788 366 aa12.63□□□□□ -0.39
CCDC12-204ENST00000460035 OTOP1Q7RTM1 612 aa12.63□□□□□ -0.39
CCDC12-204ENST00000460035 GPR142Q7Z601 462 aa12.63□□□□□ -0.39
CCDC12-204ENST00000460035 RIOX2Q8IUF8 465 aa12.63□□□□□ -0.39
CCDC12-204ENST00000460035 FANCBQ8NB91 859 aa12.63□□□□□ -0.39
CCDC12-204ENST00000460035 PIBF1Q8WXW3 757 aa12.63□□□□□ -0.39
CCDC12-204ENST00000460035 AGBL1Q96MI9 1066 aa12.63□□□□□ -0.39
CCDC12-204ENST00000460035 TEX13BQ9BXU2 312 aa12.63□□□□□ -0.39
CCDC12-204ENST00000460035 RANBP17Q9H2T7 1088 aaKnown RBP12.63□□□□□ -0.39
CCDC12-204ENST00000460035 MROH8Q9H579 483 aa12.63□□□□□ -0.39
CCDC12-204ENST00000460035 IVNS1ABPQ9Y6Y0 642 aa12.63□□□□□ -0.39
CCDC12-204ENST00000460035 NID2Q14112 1375 aa12.62□□□□□ -0.39
CCDC12-204ENST00000460035 GOLGA8AA7E2F4 631 aa12.62□□□□□ -0.39
CCDC12-204ENST00000460035 GOLGA8BA8MQT2 603 aa12.62□□□□□ -0.39
CCDC12-204ENST00000460035 ALAS1P13196 640 aa12.62□□□□□ -0.39
CCDC12-204ENST00000460035 EVCP57679 992 aa12.62□□□□□ -0.39
CCDC12-204ENST00000460035 COL13A1Q5TAT6 717 aaPredicted RBP12.62□□□□□ -0.39
CCDC12-204ENST00000460035 CCDC82Q8N4S0 544 aa12.62□□□□□ -0.39
CCDC12-204ENST00000460035 RAET1EQ8TD07 263 aa12.62□□□□□ -0.39
CCDC12-204ENST00000460035 LZTS2Q9BRK4 669 aa12.62□□□□□ -0.39
CCDC12-204ENST00000460035 ALDH8A1Q9H2A2 487 aaPredicted RBP12.62□□□□□ -0.39
CCDC12-204ENST00000460035 JMJD4Q9H9V9 463 aa12.62□□□□□ -0.39
CCDC12-204ENST00000460035 HOMER2Q9NSB8 354 aa12.62□□□□□ -0.39
CCDC12-204ENST00000460035 SRRDQ9UH36 339 aa12.62□□□□□ -0.39
CCDC12-204ENST00000460035 CCPG1Q9ULG6 757 aa12.62□□□□□ -0.39
CCDC12-204ENST00000460035 RIPK3Q9Y572 518 aa12.62□□□□□ -0.39
CCDC12-204ENST00000460035 ZNF536O15090 1300 aa12.62□□□□□ -0.39
CCDC12-204ENST00000460035 PTPREP23469 700 aa12.61□□□□□ -0.39
CCDC12-204ENST00000460035 SMARCA1P28370 1054 aa12.61□□□□□ -0.39
CCDC12-204ENST00000460035 FLT3LGP49771 235 aa12.61□□□□□ -0.39
CCDC12-204ENST00000460035 METAP2P50579 478 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC12-204ENST00000460035 PRMT2P55345 433 aa12.61□□□□□ -0.39
CCDC12-204ENST00000460035 PRKCZQ05513 592 aa12.61□□□□□ -0.39
CCDC12-204ENST00000460035 TOB2Q14106 344 aaPredicted RBP12.61□□□□□ -0.39
CCDC12-204ENST00000460035 CDC37Q16543 378 aaPredicted RBP12.61□□□□□ -0.39
CCDC12-204ENST00000460035 RTN1Q16799 776 aa12.61□□□□□ -0.39
CCDC12-204ENST00000460035 NOL8Q76FK4 1167 aaKnown RBP12.61□□□□□ -0.39
CCDC12-204ENST00000460035 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC12-204ENST00000460035 NBPF11Q86T75 865 aa12.61□□□□□ -0.39
CCDC12-204ENST00000460035 HOMER1Q86YM7 354 aa12.61□□□□□ -0.39
CCDC12-204ENST00000460035 CMTR1Q8N1G2 835 aaKnown RBP12.61□□□□□ -0.39
CCDC12-204ENST00000460035 MTMR8Q96EF0 704 aa12.61□□□□□ -0.39
CCDC12-204ENST00000460035 TRERF1Q96PN7 1200 aa12.61□□□□□ -0.39
CCDC12-204ENST00000460035 NUDT12Q9BQG2 462 aa12.61□□□□□ -0.39
CCDC12-204ENST00000460035 PNMA2Q9UL42 364 aa12.61□□□□□ -0.39
CCDC12-204ENST00000460035 GABRQQ9UN88 632 aa12.61□□□□□ -0.39
CCDC12-204ENST00000460035 PTPN22Q9Y2R2 807 aa12.61□□□□□ -0.39
CCDC12-204ENST00000460035 KIAA1217Q5T5P2 1943 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 SLC15A5A6NIM6 579 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 STRNO43815 780 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 PLEKHA8P1O95397 391 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 ICAM1P05362 532 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 FCER1AP12319 257 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 TAL1P17542 331 aaPredicted RBP12.6□□□□□ -0.39
CCDC12-204ENST00000460035 CYP2B6P20813 491 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 PDIA3P30101 505 aaKnown RBP12.6□□□□□ -0.39
CCDC12-204ENST00000460035 CCT2P78371 535 aaKnown RBP12.6□□□□□ -0.39
CCDC12-204ENST00000460035 KCTD2Q14681 263 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 PPP2R5BQ15173 497 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 ANKRD1Q15327 319 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 PKN2Q16513 984 aaKnown RBP12.6□□□□□ -0.39
CCDC12-204ENST00000460035 SLC35G1Q2M3R5 365 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 QRICH1Q2TAL8 776 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 TKFCQ3LXA3 575 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 USH1GQ495M9 461 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 DPP9Q86TI2 863 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 FBXO11Q86XK2 927 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 SRBD1Q8N5C6 995 aaKnown RBP12.6□□□□□ -0.39
CCDC12-204ENST00000460035 CHST13Q8NET6 341 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 RRP36Q96EU6 259 aaKnown RBP12.6□□□□□ -0.39
CCDC12-204ENST00000460035 DDX11Q96FC9 970 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 PIGSQ96S52 555 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 MMP19Q99542 508 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 KIF2CQ99661 725 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 SPZ1Q9BXG8 430 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 RIOX1Q9H6W3 641 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 RNF146Q9NTX7 359 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 RBM28Q9NW13 759 aaKnown RBP12.6□□□□□ -0.39
CCDC12-204ENST00000460035 FBXO40Q9UH90 709 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 GJD2Q9UKL4 321 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 FRMPD3Q5JV73 1810 aa12.6□□□□□ -0.39
CCDC12-204ENST00000460035 CCDC196A0A1B0GTZ2 297 aa12.59□□□□□ -0.39
CCDC12-204ENST00000460035 ZBTB5O15062 677 aa12.59□□□□□ -0.39
CCDC12-204ENST00000460035 AK2P54819 239 aa12.59□□□□□ -0.39
CCDC12-204ENST00000460035 STK3Q13188 491 aa12.59□□□□□ -0.39
CCDC12-204ENST00000460035 MORN1Q5T089 497 aa12.59□□□□□ -0.39
CCDC12-204ENST00000460035 FBXO46Q6PJ61 603 aaPredicted RBP12.59□□□□□ -0.39
CCDC12-204ENST00000460035 ABRAQ8N0Z2 381 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms