RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 APBB1IPQ7Z5R6 666 aaPredicted RBP10.79□□□□□ -0.68
UFD1-205ENST00000459854 SP8Q8IXZ3 490 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 RUNDC3BQ96NL0 473 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 ZNF804BA4D1E1 1349 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 ERCC5P28715 1186 aaPredicted RBP10.79□□□□□ -0.68
UFD1-205ENST00000459854 CHRNA5P30532 468 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 IRX1P78414 480 aaPredicted RBP10.79□□□□□ -0.68
UFD1-205ENST00000459854 ILDR2Q71H61 639 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 SYNE4Q8N205 404 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 GABPB2Q8TAK5 448 aaPredicted RBP10.79□□□□□ -0.68
UFD1-205ENST00000459854 SAAL1Q96ER3 474 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 KAT14Q9H8E8 782 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.79□□□□□ -0.68
UFD1-205ENST00000459854 TAF5LO75529 589 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 DPEP1P16444 411 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 DDR1Q08345 913 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 INF2Q27J81 1249 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 CCDC84Q86UT8 332 aaPredicted RBP10.79□□□□□ -0.68
UFD1-205ENST00000459854 FBXO18Q8NFZ0 1043 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 HAUS4Q9H6D7 363 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 STK24Q9Y6E0 443 aa10.79□□□□□ -0.68
UFD1-205ENST00000459854 C21orf2O43822 256 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 RANBP6O60518 1105 aaKnown RBP10.78□□□□□ -0.68
UFD1-205ENST00000459854 TNNI3KQ59H18 835 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 DPY19L2Q6NUT2 758 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 MICU3Q86XE3 530 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 ARHGAP18Q8N392 663 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 GFM2Q969S9 779 aaKnown RBP10.78□□□□□ -0.68
UFD1-205ENST00000459854 DHX58Q96C10 678 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 SH3GL3Q99963 347 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 CNOT10Q9H9A5 744 aaKnown RBP10.78□□□□□ -0.68
UFD1-205ENST00000459854 COMMD10Q9Y6G5 202 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 FPGT-TNNI3KV9GXZ4 949 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 UTYO14607 1347 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 PTPDC1A2A3K4 754 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 MINDY4BA8MYZ0 360 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 SUN1O94901 812 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 PDE8BO95263 885 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 SKIP12755 728 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 KRT71Q3SY84 523 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 SLC9C1Q4G0N8 1177 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 PLEKHM2Q8IWE5 1019 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 CCDC197Q8NCU1 140 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 ESR2Q92731 530 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 RGS16O15492 202 aaPredicted RBP10.78□□□□□ -0.68
UFD1-205ENST00000459854 LMNAP02545 664 aaKnown RBP10.78□□□□□ -0.68
UFD1-205ENST00000459854 CHMLP26374 656 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 KRT2P35908 639 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 SLC4A8Q2Y0W8 1093 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 SAMD1Q6SPF0 538 aaPredicted RBP10.78□□□□□ -0.68
UFD1-205ENST00000459854 SRGAP1Q7Z6B7 1085 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 LRRC8AQ8IWT6 810 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 SMC1BQ8NDV3 1235 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 GPR108Q9NPR9 543 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 HYOU1Q9Y4L1 999 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 CCDC169A6NNP5 214 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 RABL6Q3YEC7 729 aaPredicted RBP10.78□□□□□ -0.68
UFD1-205ENST00000459854 CREB3L3Q68CJ9 461 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 TBC1D22AQ8WUA7 517 aa10.78□□□□□ -0.68
UFD1-205ENST00000459854 CCDC97Q96F63 343 aaPredicted RBP10.78□□□□□ -0.68
UFD1-205ENST00000459854 TRIM6Q9C030 488 aaPredicted RBP10.78□□□□□ -0.68
UFD1-205ENST00000459854 SYNRGQ9UMZ2 1314 aa10.77□□□□□ -0.68
UFD1-205ENST00000459854 CSF1RP07333 972 aa10.77□□□□□ -0.68
UFD1-205ENST00000459854 GNAT2P19087 354 aa10.77□□□□□ -0.68
UFD1-205ENST00000459854 HOXA7P31268 230 aaPredicted RBP10.77□□□□□ -0.68
UFD1-205ENST00000459854 COG7P83436 770 aa10.77□□□□□ -0.68
UFD1-205ENST00000459854 HAUS8Q9BT25 410 aa10.77□□□□□ -0.68
UFD1-205ENST00000459854 SMIM23A6NLE4 172 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 FOXO4P98177 505 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 TBC1D8BQ0IIM8 1120 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 CNNM4Q6P4Q7 775 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 ZNF526Q8TF50 670 aaPredicted RBP10.77□□□□□ -0.69
UFD1-205ENST00000459854 DRC3Q9H069 523 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 CCDC68Q9H2F9 335 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 STX10O60499 249 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 OPHN1O60890 802 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 CCDC25Q86WR0 208 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 TRIML1Q8N9V2 468 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 MAST3O60307 1309 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 BTAF1O14981 1849 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 BAG3O95817 575 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 STX2P32856 288 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 PEX19P40855 299 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 CCDC170Q8IYT3 715 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 XAGE2Q96GT9 111 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 TM6SF1Q9BZW5 370 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 FAM169AQ9Y6X4 670 aa10.77□□□□□ -0.69
UFD1-205ENST00000459854 RNF8O76064 485 aa10.76□□□□□ -0.69
UFD1-205ENST00000459854 MARCKSP29966 332 aaPredicted RBP10.76□□□□□ -0.69
UFD1-205ENST00000459854 PTPN12Q05209 780 aaKnown RBP10.76□□□□□ -0.69
UFD1-205ENST00000459854 EPHA10Q5JZY3 1008 aa10.76□□□□□ -0.69
UFD1-205ENST00000459854 N4BP2L2Q92802 583 aaPredicted RBP10.76□□□□□ -0.69
UFD1-205ENST00000459854 CELF1Q92879 486 aaKnown RBP10.76□□□□□ -0.69
UFD1-205ENST00000459854 NOC4LQ9BVI4 516 aaKnown RBP10.76□□□□□ -0.69
UFD1-205ENST00000459854 RNF14Q9UBS8 474 aa10.76□□□□□ -0.69
UFD1-205ENST00000459854 CDC23Q9UJX2 597 aa10.76□□□□□ -0.69
UFD1-205ENST00000459854 CTNNA1P35221 906 aaKnown RBP10.76□□□□□ -0.69
UFD1-205ENST00000459854 RPS6KA1Q15418 735 aa10.76□□□□□ -0.69
UFD1-205ENST00000459854 LRRC24Q50LG9 513 aa10.76□□□□□ -0.69
UFD1-205ENST00000459854 CCDC92Q53HC0 331 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms