RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 SRRDQ9UH36 339 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 GJD2Q9UKL4 321 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 NID2Q14112 1375 aa16.46■□□□□ 0.23
SMPD4-215ENST00000457039 ZBTB43O43298 467 aa16.45■□□□□ 0.22
SMPD4-215ENST00000457039 ICAM1P05362 532 aa16.45■□□□□ 0.22
SMPD4-215ENST00000457039 SMARCA1P28370 1054 aa16.45■□□□□ 0.22
SMPD4-215ENST00000457039 COPB2P35606 906 aa16.45■□□□□ 0.22
SMPD4-215ENST00000457039 PRKCZQ05513 592 aa16.45■□□□□ 0.22
SMPD4-215ENST00000457039 COL13A1Q5TAT6 717 aaPredicted RBP16.45■□□□□ 0.22
SMPD4-215ENST00000457039 CCDC174Q6PII3 467 aa16.45■□□□□ 0.22
SMPD4-215ENST00000457039 SYNE3Q6ZMZ3 975 aa16.45■□□□□ 0.22
SMPD4-215ENST00000457039 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.45■□□□□ 0.22
SMPD4-215ENST00000457039 PLEKHH3Q7Z736 793 aa16.45■□□□□ 0.22
SMPD4-215ENST00000457039 AGBL1Q96MI9 1066 aa16.45■□□□□ 0.22
SMPD4-215ENST00000457039 FAM217BQ9NTX9 383 aaPredicted RBP16.45■□□□□ 0.22
SMPD4-215ENST00000457039 GABRQQ9UN88 632 aa16.45■□□□□ 0.22
SMPD4-215ENST00000457039 HPS5Q9UPZ3 1129 aa16.45■□□□□ 0.22
SMPD4-215ENST00000457039 CTDP1Q9Y5B0 961 aaPredicted RBP16.45■□□□□ 0.22
SMPD4-215ENST00000457039 PLXNB2O15031 1838 aa16.45■□□□□ 0.22
SMPD4-215ENST00000457039 PLEKHA8P1O95397 391 aa16.44■□□□□ 0.22
SMPD4-215ENST00000457039 PTPREP23469 700 aa16.44■□□□□ 0.22
SMPD4-215ENST00000457039 HOXD10P28358 340 aa16.44■□□□□ 0.22
SMPD4-215ENST00000457039 GNAQP50148 359 aa16.44■□□□□ 0.22
SMPD4-215ENST00000457039 PRMT2P55345 433 aa16.44■□□□□ 0.22
SMPD4-215ENST00000457039 GRB14Q14449 540 aa16.44■□□□□ 0.22
SMPD4-215ENST00000457039 PKN2Q16513 984 aaKnown RBP16.44■□□□□ 0.22
SMPD4-215ENST00000457039 CDC37Q16543 378 aaPredicted RBP16.44■□□□□ 0.22
SMPD4-215ENST00000457039 MORN1Q5T089 497 aa16.44■□□□□ 0.22
SMPD4-215ENST00000457039 TMTC3Q6ZXV5 915 aa16.44■□□□□ 0.22
SMPD4-215ENST00000457039 NCAPG2Q86XI2 1143 aa16.44■□□□□ 0.22
SMPD4-215ENST00000457039 CCDC144CPQ8IYA2 1237 aa16.44■□□□□ 0.22
SMPD4-215ENST00000457039 SRBD1Q8N5C6 995 aaKnown RBP16.44■□□□□ 0.22
SMPD4-215ENST00000457039 USP6NLQ92738 828 aa16.44■□□□□ 0.22
SMPD4-215ENST00000457039 COA7Q96BR5 231 aa16.44■□□□□ 0.22
SMPD4-215ENST00000457039 TBC1D32Q96NH3 1257 aa16.44■□□□□ 0.22
SMPD4-215ENST00000457039 LZTS2Q9BRK4 669 aa16.44■□□□□ 0.22
SMPD4-215ENST00000457039 SPZ1Q9BXG8 430 aa16.44■□□□□ 0.22
SMPD4-215ENST00000457039 UPF2Q9HAU5 1272 aaKnown RBP16.44■□□□□ 0.22
SMPD4-215ENST00000457039 PTPN22Q9Y2R2 807 aa16.44■□□□□ 0.22
SMPD4-215ENST00000457039 DOCK3Q8IZD9 2030 aa16.43■□□□□ 0.22
SMPD4-215ENST00000457039 ZNF236Q9UL36 1845 aa16.43■□□□□ 0.22
SMPD4-215ENST00000457039 GOLGA8AA7E2F4 631 aa16.43■□□□□ 0.22
SMPD4-215ENST00000457039 GOLGA8BA8MQT2 603 aa16.43■□□□□ 0.22
SMPD4-215ENST00000457039 TAL1P17542 331 aaPredicted RBP16.43■□□□□ 0.22
SMPD4-215ENST00000457039 RTN1Q16799 776 aa16.43■□□□□ 0.22
SMPD4-215ENST00000457039 QRICH1Q2TAL8 776 aa16.43■□□□□ 0.22
SMPD4-215ENST00000457039 TKFCQ3LXA3 575 aa16.43■□□□□ 0.22
SMPD4-215ENST00000457039 CCAR1Q8IX12 1150 aaKnown RBP16.43■□□□□ 0.22
SMPD4-215ENST00000457039 CHST13Q8NET6 341 aa16.43■□□□□ 0.22
SMPD4-215ENST00000457039 RBM28Q9NW13 759 aaKnown RBP16.43■□□□□ 0.22
SMPD4-215ENST00000457039 CCPG1Q9ULG6 757 aa16.43■□□□□ 0.22
SMPD4-215ENST00000457039 SLC15A5A6NIM6 579 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 ZBTB5O15062 677 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 STRNO43815 780 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 PDIA3P30101 505 aaKnown RBP16.42■□□□□ 0.22
SMPD4-215ENST00000457039 CDC27P30260 824 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 FLT3LGP49771 235 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 METAP2P50579 478 aaKnown RBP eCLIP16.42■□□□□ 0.22
SMPD4-215ENST00000457039 NEK4P51957 841 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 AK2P54819 239 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 FUT2Q10981 343 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 IRF5Q13568 498 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 PPP2R5BQ15173 497 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 WDR78Q5VTH9 848 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 FBXO46Q6PJ61 603 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-215ENST00000457039 ABRAQ8N0Z2 381 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 SOCS4Q8WXH5 440 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 ZNF274Q96GC6 653 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-215ENST00000457039 PIGSQ96S52 555 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 MCOLN1Q9GZU1 580 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 VAT1LQ9HCJ6 419 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 PNMA2Q9UL42 364 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 PTCH2Q9Y6C5 1203 aa16.42■□□□□ 0.22
SMPD4-215ENST00000457039 DHX16O60231 1041 aaKnown RBP16.41■□□□□ 0.22
SMPD4-215ENST00000457039 PPP1R11O60927 126 aaPredicted RBP16.41■□□□□ 0.22
SMPD4-215ENST00000457039 ALAS1P13196 640 aa16.41■□□□□ 0.22
SMPD4-215ENST00000457039 CMTR1Q8N1G2 835 aaKnown RBP16.41■□□□□ 0.22
SMPD4-215ENST00000457039 TRERF1Q96PN7 1200 aa16.41■□□□□ 0.22
SMPD4-215ENST00000457039 NUDT12Q9BQG2 462 aa16.41■□□□□ 0.22
SMPD4-215ENST00000457039 LARP6Q9BRS8 491 aaKnown RBP16.41■□□□□ 0.22
SMPD4-215ENST00000457039 RNF146Q9NTX7 359 aa16.41■□□□□ 0.22
SMPD4-215ENST00000457039 FBXO40Q9UH90 709 aa16.41■□□□□ 0.22
SMPD4-215ENST00000457039 IVNS1ABPQ9Y6Y0 642 aa16.41■□□□□ 0.22
SMPD4-215ENST00000457039 SMCHD1A6NHR9 2005 aa16.4■□□□□ 0.22
SMPD4-215ENST00000457039 HOXC6P09630 235 aa16.4■□□□□ 0.22
SMPD4-215ENST00000457039 FCER1AP12319 257 aa16.4■□□□□ 0.22
SMPD4-215ENST00000457039 ADORA2AP29274 412 aa16.4■□□□□ 0.22
SMPD4-215ENST00000457039 ADD1P35611 737 aaKnown RBP16.4■□□□□ 0.22
SMPD4-215ENST00000457039 SLC4A3P48751 1232 aa16.4■□□□□ 0.22
SMPD4-215ENST00000457039 MAP2K5Q13163 448 aa16.4■□□□□ 0.22
SMPD4-215ENST00000457039 ANKRD1Q15327 319 aa16.4■□□□□ 0.22
SMPD4-215ENST00000457039 MUM1L1Q5H9M0 696 aa16.4■□□□□ 0.22
SMPD4-215ENST00000457039 CLEC4DQ8WXI8 215 aa16.4■□□□□ 0.22
SMPD4-215ENST00000457039 ACAD9Q9H845 621 aa16.4■□□□□ 0.22
SMPD4-215ENST00000457039 CWC22Q9HCG8 908 aaKnown RBP16.4■□□□□ 0.22
SMPD4-215ENST00000457039 HOMER2Q9NSB8 354 aa16.4■□□□□ 0.22
SMPD4-215ENST00000457039 TPCN1Q9ULQ1 816 aa16.4■□□□□ 0.22
SMPD4-215ENST00000457039 NAP1L2Q9ULW6 460 aaPredicted RBP16.4■□□□□ 0.22
SMPD4-215ENST00000457039 CNTNAP5Q8WYK1 1306 aa16.4■□□□□ 0.22
SMPD4-215ENST00000457039 BAZ2BQ9UIF8 2168 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms