RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 SPZ1Q9BXG8 430 aa21.71■■□□□ 1.07
SBDSP1-205ENST00000456312 UPF2Q9HAU5 1272 aaKnown RBP21.71■■□□□ 1.07
SBDSP1-205ENST00000456312 RAVER2Q9HCJ3 691 aaKnown RBP21.71■■□□□ 1.07
SBDSP1-205ENST00000456312 ISY1Q9ULR0 285 aaKnown RBP21.71■■□□□ 1.07
SBDSP1-205ENST00000456312 ZBED4O75132 1171 aa21.7■■□□□ 1.06
SBDSP1-205ENST00000456312 ICAM1P05362 532 aa21.7■■□□□ 1.06
SBDSP1-205ENST00000456312 KIF5BP33176 963 aa21.7■■□□□ 1.06
SBDSP1-205ENST00000456312 STAT3P40763 770 aa21.7■■□□□ 1.06
SBDSP1-205ENST00000456312 PSMC4P43686 418 aa21.7■■□□□ 1.06
SBDSP1-205ENST00000456312 CCDC144CPQ8IYA2 1237 aa21.7■■□□□ 1.06
SBDSP1-205ENST00000456312 ZNF274Q96GC6 653 aaPredicted RBP21.7■■□□□ 1.06
SBDSP1-205ENST00000456312 GOLGA8BA8MQT2 603 aa21.69■■□□□ 1.06
SBDSP1-205ENST00000456312 ERCC3P19447 782 aa21.69■■□□□ 1.06
SBDSP1-205ENST00000456312 MAPK4P31152 587 aa21.69■■□□□ 1.06
SBDSP1-205ENST00000456312 NEK4P51957 841 aa21.69■■□□□ 1.06
SBDSP1-205ENST00000456312 CCNA1P78396 465 aa21.69■■□□□ 1.06
SBDSP1-205ENST00000456312 FGD1P98174 961 aa21.69■■□□□ 1.06
SBDSP1-205ENST00000456312 CDC37Q16543 378 aaPredicted RBP21.69■■□□□ 1.06
SBDSP1-205ENST00000456312 SNRNP48Q6IEG0 339 aaKnown RBP21.69■■□□□ 1.06
SBDSP1-205ENST00000456312 OTOP1Q7RTM1 612 aa21.69■■□□□ 1.06
SBDSP1-205ENST00000456312 GPR142Q7Z601 462 aa21.69■■□□□ 1.06
SBDSP1-205ENST00000456312 AGBL1Q96MI9 1066 aa21.69■■□□□ 1.06
SBDSP1-205ENST00000456312 LARP6Q9BRS8 491 aaKnown RBP21.69■■□□□ 1.06
SBDSP1-205ENST00000456312 GJD2Q9UKL4 321 aa21.69■■□□□ 1.06
SBDSP1-205ENST00000456312 TPCN1Q9ULQ1 816 aa21.69■■□□□ 1.06
SBDSP1-205ENST00000456312 CNTNAP5Q8WYK1 1306 aa21.69■■□□□ 1.06
SBDSP1-205ENST00000456312 CENPFP49454 3210 aa21.69■■□□□ 1.06
SBDSP1-205ENST00000456312 GOLGA8AA7E2F4 631 aa21.68■■□□□ 1.06
SBDSP1-205ENST00000456312 PPP1R11O60927 126 aaPredicted RBP21.68■■□□□ 1.06
SBDSP1-205ENST00000456312 SLC25A27O95847 323 aa21.68■■□□□ 1.06
SBDSP1-205ENST00000456312 TAL1P17542 331 aaPredicted RBP21.68■■□□□ 1.06
SBDSP1-205ENST00000456312 FCGRTP55899 365 aa21.68■■□□□ 1.06
SBDSP1-205ENST00000456312 PPP2R5BQ15173 497 aa21.68■■□□□ 1.06
SBDSP1-205ENST00000456312 NTRK3Q16288 839 aa21.68■■□□□ 1.06
SBDSP1-205ENST00000456312 RTN1Q16799 776 aa21.68■■□□□ 1.06
SBDSP1-205ENST00000456312 QRICH1Q2TAL8 776 aa21.68■■□□□ 1.06
SBDSP1-205ENST00000456312 CPXCR1Q8N123 301 aa21.68■■□□□ 1.06
SBDSP1-205ENST00000456312 USP6NLQ92738 828 aa21.68■■□□□ 1.06
SBDSP1-205ENST00000456312 LZTS2Q9BRK4 669 aa21.68■■□□□ 1.06
SBDSP1-205ENST00000456312 RBM28Q9NW13 759 aaKnown RBP21.68■■□□□ 1.06
SBDSP1-205ENST00000456312 LRRC37A2A6NM11 1700 aa21.68■■□□□ 1.06
SBDSP1-205ENST00000456312 GNRH1P01148 92 aa21.67■■□□□ 1.06
SBDSP1-205ENST00000456312 GNAQP50148 359 aa21.67■■□□□ 1.06
SBDSP1-205ENST00000456312 METAP2P50579 478 aaKnown RBP eCLIP21.67■■□□□ 1.06
SBDSP1-205ENST00000456312 PLS1Q14651 629 aa21.67■■□□□ 1.06
SBDSP1-205ENST00000456312 RABEP1Q15276 862 aa21.67■■□□□ 1.06
SBDSP1-205ENST00000456312 MORN1Q5T089 497 aa21.67■■□□□ 1.06
SBDSP1-205ENST00000456312 SYNE3Q6ZMZ3 975 aa21.67■■□□□ 1.06
SBDSP1-205ENST00000456312 CMTR1Q8N1G2 835 aaKnown RBP21.67■■□□□ 1.06
SBDSP1-205ENST00000456312 MROH8Q9H579 483 aa21.67■■□□□ 1.06
SBDSP1-205ENST00000456312 LARGE1O95461 756 aa21.66■■□□□ 1.06
SBDSP1-205ENST00000456312 COPB2P35606 906 aa21.66■■□□□ 1.06
SBDSP1-205ENST00000456312 ADD1P35611 737 aaKnown RBP21.66■■□□□ 1.06
SBDSP1-205ENST00000456312 GRB14Q14449 540 aa21.66■■□□□ 1.06
SBDSP1-205ENST00000456312 ANKRD1Q15327 319 aa21.66■■□□□ 1.06
SBDSP1-205ENST00000456312 CCDC174Q6PII3 467 aa21.66■■□□□ 1.06
SBDSP1-205ENST00000456312 PIGSQ96S52 555 aa21.66■■□□□ 1.06
SBDSP1-205ENST00000456312 TNPO2O14787 897 aaKnown RBP21.65■■□□□ 1.06
SBDSP1-205ENST00000456312 ZBTB5O15062 677 aa21.65■■□□□ 1.06
SBDSP1-205ENST00000456312 PTPREP23469 700 aa21.65■■□□□ 1.06
SBDSP1-205ENST00000456312 KIF22Q14807 665 aa21.65■■□□□ 1.06
SBDSP1-205ENST00000456312 TKFCQ3LXA3 575 aa21.65■■□□□ 1.06
SBDSP1-205ENST00000456312 PLEKHH3Q7Z736 793 aa21.65■■□□□ 1.06
SBDSP1-205ENST00000456312 CTU1Q7Z7A3 348 aaKnown RBP21.65■■□□□ 1.06
SBDSP1-205ENST00000456312 SRRDQ9UH36 339 aa21.65■■□□□ 1.06
SBDSP1-205ENST00000456312 GABRQQ9UN88 632 aa21.65■■□□□ 1.06
SBDSP1-205ENST00000456312 PFKFB2O60825 505 aa21.64■■□□□ 1.05
SBDSP1-205ENST00000456312 ECM2O94769 699 aaPredicted RBP21.64■■□□□ 1.05
SBDSP1-205ENST00000456312 FMNL1O95466 1100 aaPredicted RBP21.64■■□□□ 1.05
SBDSP1-205ENST00000456312 PRKCZQ05513 592 aa21.64■■□□□ 1.05
SBDSP1-205ENST00000456312 ST3GAL1Q11201 340 aa21.64■■□□□ 1.05
SBDSP1-205ENST00000456312 ME3Q16798 604 aa21.64■■□□□ 1.05
SBDSP1-205ENST00000456312 MUM1L1Q5H9M0 696 aa21.64■■□□□ 1.05
SBDSP1-205ENST00000456312 NCAPG2Q86XI2 1143 aa21.64■■□□□ 1.05
SBDSP1-205ENST00000456312 ABRAQ8N0Z2 381 aa21.64■■□□□ 1.05
SBDSP1-205ENST00000456312 CHST13Q8NET6 341 aa21.64■■□□□ 1.05
SBDSP1-205ENST00000456312 IL27Q8NEV9 243 aa21.64■■□□□ 1.05
SBDSP1-205ENST00000456312 CLEC4DQ8WXI8 215 aa21.64■■□□□ 1.05
SBDSP1-205ENST00000456312 NCOA5Q9HCD5 579 aaKnown RBP21.64■■□□□ 1.05
SBDSP1-205ENST00000456312 VAT1LQ9HCJ6 419 aa21.64■■□□□ 1.05
SBDSP1-205ENST00000456312 CCPG1Q9ULG6 757 aa21.64■■□□□ 1.05
SBDSP1-205ENST00000456312 TRIM17Q9Y577 477 aa21.64■■□□□ 1.05
SBDSP1-205ENST00000456312 CD2BP2O95400 341 aaKnown RBP21.63■■□□□ 1.05
SBDSP1-205ENST00000456312 IGHA2P01877 340 aa21.63■■□□□ 1.05
SBDSP1-205ENST00000456312 SCRN1Q12765 414 aa21.63■■□□□ 1.05
SBDSP1-205ENST00000456312 RNF146Q9NTX7 359 aa21.63■■□□□ 1.05
SBDSP1-205ENST00000456312 PNMA2Q9UL42 364 aa21.63■■□□□ 1.05
SBDSP1-205ENST00000456312 DNAJC25-GNG10A0A024R161 153 aa21.62■■□□□ 1.05
SBDSP1-205ENST00000456312 PNMA6FA0A0J9YX94 578 aa21.62■■□□□ 1.05
SBDSP1-205ENST00000456312 CCDC196A0A1B0GTZ2 297 aa21.62■■□□□ 1.05
SBDSP1-205ENST00000456312 SLC15A5A6NIM6 579 aa21.62■■□□□ 1.05
SBDSP1-205ENST00000456312 OPLAHO14841 1288 aa21.62■■□□□ 1.05
SBDSP1-205ENST00000456312 STRNO43815 780 aa21.62■■□□□ 1.05
SBDSP1-205ENST00000456312 HOXC6P09630 235 aa21.62■■□□□ 1.05
SBDSP1-205ENST00000456312 PRMT2P55345 433 aa21.62■■□□□ 1.05
SBDSP1-205ENST00000456312 CCT2P78371 535 aaKnown RBP21.62■■□□□ 1.05
SBDSP1-205ENST00000456312 IRF5Q13568 498 aa21.62■■□□□ 1.05
SBDSP1-205ENST00000456312 SOCS4Q8WXH5 440 aa21.62■■□□□ 1.05
SBDSP1-205ENST00000456312 COA7Q96BR5 231 aa21.62■■□□□ 1.05
SBDSP1-205ENST00000456312 TRERF1Q96PN7 1200 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms