RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 CPLX1O14810 134 aa16.59■□□□□ 0.25
HMGXB4-204ENST00000455359 ZBTB5O15062 677 aa16.59■□□□□ 0.25
HMGXB4-204ENST00000455359 CYTH3O43739 400 aa16.59■□□□□ 0.25
HMGXB4-204ENST00000455359 CDKL5O76039 1030 aa16.59■□□□□ 0.25
HMGXB4-204ENST00000455359 HSPA8P11142 646 aaKnown RBP16.59■□□□□ 0.25
HMGXB4-204ENST00000455359 LACTBP83111 547 aaPredicted RBP16.59■□□□□ 0.25
HMGXB4-204ENST00000455359 CDC37Q16543 378 aaPredicted RBP16.59■□□□□ 0.25
HMGXB4-204ENST00000455359 CCAR1Q8IX12 1150 aaKnown RBP16.59■□□□□ 0.25
HMGXB4-204ENST00000455359 CHST13Q8NET6 341 aa16.59■□□□□ 0.25
HMGXB4-204ENST00000455359 ZNF296Q8WUU4 475 aaPredicted RBP16.59■□□□□ 0.25
HMGXB4-204ENST00000455359 RRP36Q96EU6 259 aaKnown RBP16.59■□□□□ 0.25
HMGXB4-204ENST00000455359 MOV10L1Q9BXT6 1211 aaKnown RBP16.59■□□□□ 0.25
HMGXB4-204ENST00000455359 FBXO40Q9UH90 709 aa16.59■□□□□ 0.25
HMGXB4-204ENST00000455359 ZNF536O15090 1300 aa16.58■□□□□ 0.25
HMGXB4-204ENST00000455359 FOXN1O15353 648 aa16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 PLEKHA8P1O95397 391 aa16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 IFNAR1P17181 557 aa16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 CDC27P30260 824 aa16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 ADD1P35611 737 aaKnown RBP16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 FCGRTP55899 365 aa16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 FUT2Q10981 343 aa16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 PLS1Q14651 629 aa16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 Q3C1V9 767 aa16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 SNRNP48Q6IEG0 339 aaKnown RBP16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 NBPF11Q86T75 865 aa16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 RAB11FIP4Q86YS3 637 aa16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 ABRAQ8N0Z2 381 aa16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 AMNQ9BXJ7 453 aa16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 RAVER2Q9HCJ3 691 aaKnown RBP16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 VAT1LQ9HCJ6 419 aa16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 SEC63Q9UGP8 760 aaKnown RBP16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 PCNTO95613 3336 aa16.58■□□□□ 0.24
HMGXB4-204ENST00000455359 STRNO43815 780 aa16.57■□□□□ 0.24
HMGXB4-204ENST00000455359 CCT2P78371 535 aaKnown RBP16.57■□□□□ 0.24
HMGXB4-204ENST00000455359 ME3Q16798 604 aa16.57■□□□□ 0.24
HMGXB4-204ENST00000455359 SLC35G1Q2M3R5 365 aa16.57■□□□□ 0.24
HMGXB4-204ENST00000455359 QRICH1Q2TAL8 776 aa16.57■□□□□ 0.24
HMGXB4-204ENST00000455359 TEX2Q8IWB9 1127 aa16.57■□□□□ 0.24
HMGXB4-204ENST00000455359 CPXCR1Q8N123 301 aa16.57■□□□□ 0.24
HMGXB4-204ENST00000455359 GTF3C6Q969F1 213 aa16.57■□□□□ 0.24
HMGXB4-204ENST00000455359 CPVLQ9H3G5 476 aa16.57■□□□□ 0.24
HMGXB4-204ENST00000455359 CCPG1Q9ULG6 757 aa16.57■□□□□ 0.24
HMGXB4-204ENST00000455359 hCG_1984214I3L0E3 225 aa16.56■□□□□ 0.24
HMGXB4-204ENST00000455359 ERCC3P19447 782 aa16.56■□□□□ 0.24
HMGXB4-204ENST00000455359 HOXD10P28358 340 aa16.56■□□□□ 0.24
HMGXB4-204ENST00000455359 PRMT2P55345 433 aa16.56■□□□□ 0.24
HMGXB4-204ENST00000455359 SCRN1Q12765 414 aa16.56■□□□□ 0.24
HMGXB4-204ENST00000455359 NTRK3Q16288 839 aa16.56■□□□□ 0.24
HMGXB4-204ENST00000455359 CCDC174Q6PII3 467 aa16.56■□□□□ 0.24
HMGXB4-204ENST00000455359 FBXO11Q86XK2 927 aa16.56■□□□□ 0.24
HMGXB4-204ENST00000455359 TRIM22Q8IYM9 498 aa16.56■□□□□ 0.24
HMGXB4-204ENST00000455359 ZNF713Q8N859 430 aaPredicted RBP16.56■□□□□ 0.24
HMGXB4-204ENST00000455359 PIGSQ96S52 555 aa16.56■□□□□ 0.24
HMGXB4-204ENST00000455359 LARP6Q9BRS8 491 aaKnown RBP16.56■□□□□ 0.24
HMGXB4-204ENST00000455359 RNF26Q9BY78 433 aaPredicted RBP16.56■□□□□ 0.24
HMGXB4-204ENST00000455359 PRDM10Q9NQV6 1147 aa16.56■□□□□ 0.24
HMGXB4-204ENST00000455359 ABCB11O95342 1321 aa16.56■□□□□ 0.24
HMGXB4-204ENST00000455359 CNTNAP5Q8WYK1 1306 aa16.56■□□□□ 0.24
HMGXB4-204ENST00000455359 PRPF3O43395 683 aaKnown RBP16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 PSMC4P43686 418 aa16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 AKAP17AQ02040 695 aaKnown RBP16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 PLEKHH3Q7Z736 793 aa16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 NCAPG2Q86XI2 1143 aa16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 FAM177A1Q8N128 213 aaPredicted RBP16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 RGS22Q8NE09 1264 aa16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 SNX21Q969T3 373 aa16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 COA7Q96BR5 231 aa16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 AGBL1Q96MI9 1066 aa16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 LLPHQ9BRT6 129 aaKnown RBP16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 ACAD9Q9H845 621 aa16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 NCOA5Q9HCD5 579 aaKnown RBP16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 TSKSQ9UJT2 592 aa16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 MRPL11Q9Y3B7 192 aaKnown RBP16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 IVNS1ABPQ9Y6Y0 642 aa16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 V9GY48 417 aaPredicted RBP16.55■□□□□ 0.24
HMGXB4-204ENST00000455359 SLC15A5A6NIM6 579 aa16.54■□□□□ 0.24
HMGXB4-204ENST00000455359 TNPO2O14787 897 aaKnown RBP16.54■□□□□ 0.24
HMGXB4-204ENST00000455359 FMNL1O95466 1100 aaPredicted RBP16.54■□□□□ 0.24
HMGXB4-204ENST00000455359 SNAP25P60880 206 aa16.54■□□□□ 0.24
HMGXB4-204ENST00000455359 STK3Q13188 491 aa16.54■□□□□ 0.24
HMGXB4-204ENST00000455359 HOMER1Q86YM7 354 aa16.54■□□□□ 0.24
HMGXB4-204ENST00000455359 CMTR1Q8N1G2 835 aaKnown RBP16.54■□□□□ 0.24
HMGXB4-204ENST00000455359 SAMD3Q8N6K7 520 aa16.54■□□□□ 0.24
HMGXB4-204ENST00000455359 SOCS4Q8WXH5 440 aa16.54■□□□□ 0.24
HMGXB4-204ENST00000455359 TRERF1Q96PN7 1200 aa16.54■□□□□ 0.24
HMGXB4-204ENST00000455359 PORCNQ9H237 461 aa16.54■□□□□ 0.24
HMGXB4-204ENST00000455359 EFCC1Q9HA90 598 aa16.54■□□□□ 0.24
HMGXB4-204ENST00000455359 CWC22Q9HCG8 908 aaKnown RBP16.54■□□□□ 0.24
HMGXB4-204ENST00000455359 RNF146Q9NTX7 359 aa16.54■□□□□ 0.24
HMGXB4-204ENST00000455359 PCDHA1Q9Y5I3 950 aa16.54■□□□□ 0.24
HMGXB4-204ENST00000455359 RLFQ13129 1914 aa16.53■□□□□ 0.24
HMGXB4-204ENST00000455359 PEX10O60683 326 aa16.53■□□□□ 0.24
HMGXB4-204ENST00000455359 FCER1AP12319 257 aa16.53■□□□□ 0.24
HMGXB4-204ENST00000455359 ALAS1P13196 640 aa16.53■□□□□ 0.24
HMGXB4-204ENST00000455359 LBX1P52954 281 aa16.53■□□□□ 0.24
HMGXB4-204ENST00000455359 SSRP1Q08945 709 aaKnown RBP16.53■□□□□ 0.24
HMGXB4-204ENST00000455359 KCTD2Q14681 263 aa16.53■□□□□ 0.24
HMGXB4-204ENST00000455359 NOL8Q76FK4 1167 aaKnown RBP16.53■□□□□ 0.24
HMGXB4-204ENST00000455359 GPR142Q7Z601 462 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms