RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 OSBPP22059 807 aa19.17■□□□□ 0.66
CCDC90B-202ENST00000455220 NOGQ13253 232 aa19.17■□□□□ 0.66
CCDC90B-202ENST00000455220 PAXIP1Q6ZW49 1069 aaPredicted RBP19.17■□□□□ 0.66
CCDC90B-202ENST00000455220 ZNF713Q8N859 430 aaPredicted RBP19.17■□□□□ 0.66
CCDC90B-202ENST00000455220 RGS22Q8NE09 1264 aa19.17■□□□□ 0.66
CCDC90B-202ENST00000455220 REPS2Q8NFH8 660 aa19.17■□□□□ 0.66
CCDC90B-202ENST00000455220 CAPNS2Q96L46 248 aa19.17■□□□□ 0.66
CCDC90B-202ENST00000455220 AIFM3Q96NN9 605 aa19.17■□□□□ 0.66
CCDC90B-202ENST00000455220 ALG1Q9BT22 464 aa19.17■□□□□ 0.66
CCDC90B-202ENST00000455220 SREBF2Q12772 1141 aa19.16■□□□□ 0.66
CCDC90B-202ENST00000455220 WWC2Q6AWC2 1192 aa19.16■□□□□ 0.66
CCDC90B-202ENST00000455220 FAM177A1Q8N128 213 aaPredicted RBP19.16■□□□□ 0.66
CCDC90B-202ENST00000455220 P2RX7Q99572 595 aaKnown RBP19.16■□□□□ 0.66
CCDC90B-202ENST00000455220 COL11A1P12107 1806 aaPredicted RBP19.16■□□□□ 0.66
CCDC90B-202ENST00000455220 ZNF536O15090 1300 aa19.16■□□□□ 0.66
CCDC90B-202ENST00000455220 IGF2BP3O00425 579 aaKnown RBP eCLIP19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 ZBED4O75132 1171 aa19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 PDCP20941 246 aa19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 TM4SF4P48230 202 aa19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 SNAP25P60880 206 aa19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 HERVK_113P62684 666 aa19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 POTEEQ6S8J3 1075 aa19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 SAMD1Q6SPF0 538 aaPredicted RBP19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 MB21D1Q8N884 522 aa19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 SHISA4Q96DD7 197 aa19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 ZIC5Q96T25 663 aa19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 BARHL2Q9NY43 387 aa19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 ATP2A1O14983 1001 aa19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 OAZ1P54368 228 aa19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 KIF23Q02241 960 aaPredicted RBP19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 IFNL1Q8IU54 200 aa19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 GTF3C2Q8WUA4 911 aaPredicted RBP19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 GPKOWQ92917 476 aaPredicted RBP eCLIP19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 AMNQ9BXJ7 453 aa19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 SH3GLB2Q9NR46 395 aa19.15■□□□□ 0.66
CCDC90B-202ENST00000455220 STXBP3O00186 592 aa19.14■□□□□ 0.65
CCDC90B-202ENST00000455220 ICAM1P05362 532 aa19.14■□□□□ 0.65
CCDC90B-202ENST00000455220 SYT1P21579 422 aa19.14■□□□□ 0.65
CCDC90B-202ENST00000455220 LARP1BQ659C4 914 aaKnown RBP19.14■□□□□ 0.65
CCDC90B-202ENST00000455220 TYW1BQ6NUM6 668 aa19.14■□□□□ 0.65
CCDC90B-202ENST00000455220 PPP1R18Q6NYC8 613 aa19.14■□□□□ 0.65
CCDC90B-202ENST00000455220 CCDC174Q6PII3 467 aa19.14■□□□□ 0.65
CCDC90B-202ENST00000455220 HEATR3Q7Z4Q2 680 aa19.14■□□□□ 0.65
CCDC90B-202ENST00000455220 FBXO11Q86XK2 927 aa19.14■□□□□ 0.65
CCDC90B-202ENST00000455220 REM2Q8IYK8 340 aaPredicted RBP19.14■□□□□ 0.65
CCDC90B-202ENST00000455220 C8orf76Q96K31 380 aa19.14■□□□□ 0.65
CCDC90B-202ENST00000455220 PNMA2Q9UL42 364 aa19.14■□□□□ 0.65
CCDC90B-202ENST00000455220 ZNF214Q9UL59 606 aaPredicted RBP19.14■□□□□ 0.65
CCDC90B-202ENST00000455220 THSD7BQ9C0I4 1608 aa19.13■□□□□ 0.65
CCDC90B-202ENST00000455220 SMCHD1A6NHR9 2005 aa19.13■□□□□ 0.65
CCDC90B-202ENST00000455220 PDIA4P13667 645 aaKnown RBP19.13■□□□□ 0.65
CCDC90B-202ENST00000455220 XBP1P17861 261 aa19.13■□□□□ 0.65
CCDC90B-202ENST00000455220 TRAF1Q13077 416 aa19.13■□□□□ 0.65
CCDC90B-202ENST00000455220 GRM1Q13255 1194 aa19.13■□□□□ 0.65
CCDC90B-202ENST00000455220 TMEM132BQ14DG7 1078 aa19.13■□□□□ 0.65
CCDC90B-202ENST00000455220 FBXO18Q8NFZ0 1043 aa19.13■□□□□ 0.65
CCDC90B-202ENST00000455220 PARK7Q99497 189 aaKnown RBP19.13■□□□□ 0.65
CCDC90B-202ENST00000455220 VPS54Q9P1Q0 977 aa19.13■□□□□ 0.65
CCDC90B-202ENST00000455220 WDR33Q9C0J8 1336 aaKnown RBP19.12■□□□□ 0.65
CCDC90B-202ENST00000455220 CYP2C8P10632 490 aa19.12■□□□□ 0.65
CCDC90B-202ENST00000455220 HTRA3P83110 453 aa19.12■□□□□ 0.65
CCDC90B-202ENST00000455220 OTUD7BQ6GQQ9 843 aa19.12■□□□□ 0.65
CCDC90B-202ENST00000455220 COA7Q96BR5 231 aa19.12■□□□□ 0.65
CCDC90B-202ENST00000455220 GJB4Q9NTQ9 266 aa19.12■□□□□ 0.65
CCDC90B-202ENST00000455220 PCDHA1Q9Y5I3 950 aa19.12■□□□□ 0.65
CCDC90B-202ENST00000455220 ESYT2A0FGR8 921 aa19.11■□□□□ 0.65
CCDC90B-202ENST00000455220 AOC2O75106 756 aa19.11■□□□□ 0.65
CCDC90B-202ENST00000455220 CNMDO75829 334 aa19.11■□□□□ 0.65
CCDC90B-202ENST00000455220 HSPA6P17066 643 aa19.11■□□□□ 0.65
CCDC90B-202ENST00000455220 KRT40Q6A162 431 aa19.11■□□□□ 0.65
CCDC90B-202ENST00000455220 CCDC148Q8NFR7 591 aa19.11■□□□□ 0.65
CCDC90B-202ENST00000455220 CCDC12Q8WUD4 166 aaPredicted RBP19.11■□□□□ 0.65
CCDC90B-202ENST00000455220 AGBL1Q96MI9 1066 aa19.11■□□□□ 0.65
CCDC90B-202ENST00000455220 PHF20Q9BVI0 1012 aa19.11■□□□□ 0.65
CCDC90B-202ENST00000455220 RAVER2Q9HCJ3 691 aaKnown RBP19.11■□□□□ 0.65
CCDC90B-202ENST00000455220 BTBD7Q9P203 1132 aa19.11■□□□□ 0.65
CCDC90B-202ENST00000455220 RABGAP1Q9Y3P9 1069 aa19.11■□□□□ 0.65
CCDC90B-202ENST00000455220 CTDP1Q9Y5B0 961 aaPredicted RBP19.11■□□□□ 0.65
CCDC90B-202ENST00000455220 ABCB11O95342 1321 aa19.11■□□□□ 0.65
CCDC90B-202ENST00000455220 STX6O43752 255 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 MAP2K2P36507 400 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 GCLCP48506 637 aaPredicted RBP19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 VEGFBP49765 207 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 NAPAP54920 295 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 TRIM29Q14134 588 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 CPXCR1Q8N123 301 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 SMCR8Q8TEV9 937 aaPredicted RBP19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 TEX13BQ9BXU2 312 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 ZMYND12Q9H0C1 365 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 RBPJLQ9UBG7 517 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 CCPG1Q9ULG6 757 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 CIZ1Q9ULV3 898 aaPredicted RBP19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 ADGRA2Q96PE1 1338 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 FOSBP53539 338 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 NPY5RQ15761 445 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 USH1GQ495M9 461 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 TXNRD2Q9NNW7 524 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 KCNJ14Q9UNX9 436 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 MTMR6Q9Y217 621 aa19.1■□□□□ 0.65
CCDC90B-202ENST00000455220 H3BQV1 296 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms