RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 PPP1R18Q6NYC8 613 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 MOB2Q70IA6 237 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 ZNF280CQ8ND82 737 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 CCDC148Q8NFR7 591 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 RASGRP4Q8TDF6 673 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 CHURC1Q8WUH1 139 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 LPAR1Q92633 364 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 C12orf42Q96LP6 360 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 RANBP17Q9H2T7 1088 aaKnown RBP6.89□□□□□ -1.31
SDC4P-201ENST00000453285 RRAGCQ9HB90 399 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 AS3MTQ9HBK9 375 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 FBXO28Q9NVF7 368 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 SEC63Q9UGP8 760 aaKnown RBP6.89□□□□□ -1.31
SDC4P-201ENST00000453285 FEM1BQ9UK73 627 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 AFG3L2Q9Y4W6 797 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 PCDHB6Q9Y5E3 794 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 DDX49Q9Y6V7 483 aaKnown RBP6.89□□□□□ -1.31
SDC4P-201ENST00000453285 A0A0G2JMZ2 1700 aa6.89□□□□□ -1.31
SDC4P-201ENST00000453285 C19orf81C9J6K1 198 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 OPLAHO14841 1288 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 SPTLC2O15270 562 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 PPP1R12BO60237 982 aaPredicted RBP6.88□□□□□ -1.31
SDC4P-201ENST00000453285 MBD3O95983 291 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 KCNA4P22459 653 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 GNA11P29992 359 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 CLK2P49760 499 aaKnown RBP6.88□□□□□ -1.31
SDC4P-201ENST00000453285 STAT2P52630 851 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 USP14P54578 494 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 FMR1Q06787 632 aaKnown RBP eCLIP6.88□□□□□ -1.31
SDC4P-201ENST00000453285 MTMR2Q13614 643 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 SH3D19Q5HYK7 790 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 AXDND1Q5T1B0 1012 aaPredicted RBP6.88□□□□□ -1.31
SDC4P-201ENST00000453285 LDLRAD1Q5T700 205 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 PPP4R3CPQ6ZMV5 832 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 PIK3AP1Q6ZUJ8 805 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 FAM160B2Q86V87 743 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 FBXO11Q86XK2 927 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 CCDC12Q8WUD4 166 aaPredicted RBP6.88□□□□□ -1.31
SDC4P-201ENST00000453285 FEZ1Q99689 392 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 BRMS1Q9HCU9 246 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 C6orf50Q9HD87 102 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 RIC8AQ9NPQ8 531 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.88□□□□□ -1.31
SDC4P-201ENST00000453285 PICK1Q9NRD5 415 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 TMEM63CQ9P1W3 806 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 ISY1Q9ULR0 285 aaKnown RBP6.88□□□□□ -1.31
SDC4P-201ENST00000453285 PCDHA7Q9UN72 937 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 ZHX2Q9Y6X8 837 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 MORC2Q9Y6X9 1032 aaPredicted RBP6.88□□□□□ -1.31
SDC4P-201ENST00000453285 DOCK3Q8IZD9 2030 aa6.88□□□□□ -1.31
SDC4P-201ENST00000453285 ZNF536O15090 1300 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 TRAF5O00463 557 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 MEIS2O14770 477 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 PPP6R2O75170 966 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 TAL1P17542 331 aaPredicted RBP6.87□□□□□ -1.31
SDC4P-201ENST00000453285 LIG1P18858 919 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 VCAM1P19320 739 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 IREB2P48200 963 aaKnown RBP6.87□□□□□ -1.31
SDC4P-201ENST00000453285 TRAPPC10P48553 1259 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 ADCY7P51828 1080 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 STK38Q15208 465 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 MAP1SQ66K74 1059 aaPredicted RBP6.87□□□□□ -1.31
SDC4P-201ENST00000453285 ADALQ6DHV7 355 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 ANKRD13AQ8IZ07 590 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 C4orf32Q8N8J7 132 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 PRPF38AQ8NAV1 312 aaKnown RBP6.87□□□□□ -1.31
SDC4P-201ENST00000453285 KCNG4Q8TDN1 519 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 CNKSR2Q8WXI2 1034 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 KIFC2Q96AC6 838 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 CLMNQ96JQ2 1002 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 P2RX7Q99572 595 aaKnown RBP6.87□□□□□ -1.31
SDC4P-201ENST00000453285 AMNQ9BXJ7 453 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 NMRK2Q9NPI5 230 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 TMEM260Q9NX78 707 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 BIN2Q9UBW5 565 aaPredicted RBP6.87□□□□□ -1.31
SDC4P-201ENST00000453285 CLEC11AQ9Y240 323 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 PCDHA1Q9Y5I3 950 aa6.87□□□□□ -1.31
SDC4P-201ENST00000453285 MCM3APO60318 1980 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 DOCK5Q9H7D0 1870 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 FAM237AA0A1B0GTK4 181 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 A0A1W2PQ27 194 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 A0A1W2PQ64 194 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 A0A1W2PQD8 194 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 SPDYE5A6NIY4 337 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 TRIM75PA6NK02 468 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 ATP2B1P20020 1258 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 PTPREP23469 700 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 MARCKSP29966 332 aaPredicted RBP6.86□□□□□ -1.31
SDC4P-201ENST00000453285 NF2P35240 595 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 MRPL12P52815 198 aaKnown RBP6.86□□□□□ -1.31
SDC4P-201ENST00000453285 HMGCS2P54868 508 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 GRIN1Q05586 938 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 PPATQ06203 517 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 IKQ13123 557 aaPredicted RBP6.86□□□□□ -1.31
SDC4P-201ENST00000453285 ZNF174Q15697 407 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 UBE2SQ16763 222 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 INF2Q27J81 1249 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 TTC38Q5R3I4 469 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 JAKMIP3Q5VZ66 844 aa6.86□□□□□ -1.31
SDC4P-201ENST00000453285 CAVIN1Q6NZI2 390 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms