RNA–Protein interactions for RNA: ENST00000448789.2

RAB5B-202, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5B, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-202ENST00000448789 PNMA8AQ86V59 439 aaPredicted RBP17.26■□□□□ 0.35
RAB5B-202ENST00000448789 ZNF280CQ8ND82 737 aa17.26■□□□□ 0.35
RAB5B-202ENST00000448789 CCDC12Q8WUD4 166 aaPredicted RBP17.26■□□□□ 0.35
RAB5B-202ENST00000448789 CNKSR2Q8WXI2 1034 aa17.26■□□□□ 0.35
RAB5B-202ENST00000448789 TMEM63CQ9P1W3 806 aa17.26■□□□□ 0.35
RAB5B-202ENST00000448789 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.26■□□□□ 0.35
RAB5B-202ENST00000448789 SPTLC2O15270 562 aa17.26■□□□□ 0.35
RAB5B-202ENST00000448789 LIG1P18858 919 aa17.26■□□□□ 0.35
RAB5B-202ENST00000448789 VCAM1P19320 739 aa17.26■□□□□ 0.35
RAB5B-202ENST00000448789 BACE1P56817 501 aa17.26■□□□□ 0.35
RAB5B-202ENST00000448789 MAP3K9P80192 1104 aa17.26■□□□□ 0.35
RAB5B-202ENST00000448789 MAP1SQ66K74 1059 aaPredicted RBP17.26■□□□□ 0.35
RAB5B-202ENST00000448789 PPP1R18Q6NYC8 613 aa17.26■□□□□ 0.35
RAB5B-202ENST00000448789 LPAR1Q92633 364 aa17.26■□□□□ 0.35
RAB5B-202ENST00000448789 KIFC2Q96AC6 838 aa17.26■□□□□ 0.35
RAB5B-202ENST00000448789 RRAGCQ9HB90 399 aa17.26■□□□□ 0.35
RAB5B-202ENST00000448789 C6orf50Q9HD87 102 aa17.26■□□□□ 0.35
RAB5B-202ENST00000448789 TMEM260Q9NX78 707 aa17.26■□□□□ 0.35
RAB5B-202ENST00000448789 PCDHA7Q9UN72 937 aa17.26■□□□□ 0.35
RAB5B-202ENST00000448789 TRAF5O00463 557 aa17.25■□□□□ 0.35
RAB5B-202ENST00000448789 WDR46O15213 610 aaKnown RBP17.25■□□□□ 0.35
RAB5B-202ENST00000448789 PPP1R12BO60237 982 aaPredicted RBP17.25■□□□□ 0.35
RAB5B-202ENST00000448789 PLA2G6O60733 806 aa17.25■□□□□ 0.35
RAB5B-202ENST00000448789 MARCKSP29966 332 aaPredicted RBP17.25■□□□□ 0.35
RAB5B-202ENST00000448789 ME1P48163 572 aa17.25■□□□□ 0.35
RAB5B-202ENST00000448789 SAMD1Q6SPF0 538 aaPredicted RBP17.25■□□□□ 0.35
RAB5B-202ENST00000448789 KCNG4Q8TDN1 519 aa17.25■□□□□ 0.35
RAB5B-202ENST00000448789 CLMNQ96JQ2 1002 aa17.25■□□□□ 0.35
RAB5B-202ENST00000448789 AS3MTQ9HBK9 375 aa17.25■□□□□ 0.35
RAB5B-202ENST00000448789 CLEC11AQ9Y240 323 aa17.25■□□□□ 0.35
RAB5B-202ENST00000448789 PCDHA1Q9Y5I3 950 aa17.25■□□□□ 0.35
RAB5B-202ENST00000448789 MRVI1Q9Y6F6 885 aa17.25■□□□□ 0.35
RAB5B-202ENST00000448789 GNA11P29992 359 aa17.24■□□□□ 0.35
RAB5B-202ENST00000448789 ADCY7P51828 1080 aa17.24■□□□□ 0.35
RAB5B-202ENST00000448789 HMGCS2P54868 508 aa17.24■□□□□ 0.35
RAB5B-202ENST00000448789 UBE2SQ16763 222 aa17.24■□□□□ 0.35
RAB5B-202ENST00000448789 USH1GQ495M9 461 aa17.24■□□□□ 0.35
RAB5B-202ENST00000448789 AXDND1Q5T1B0 1012 aaPredicted RBP17.24■□□□□ 0.35
RAB5B-202ENST00000448789 JAKMIP3Q5VZ66 844 aa17.24■□□□□ 0.35
RAB5B-202ENST00000448789 FAM160B2Q86V87 743 aa17.24■□□□□ 0.35
RAB5B-202ENST00000448789 FBXO11Q86XK2 927 aa17.24■□□□□ 0.35
RAB5B-202ENST00000448789 CHURC1Q8WUH1 139 aa17.24■□□□□ 0.35
RAB5B-202ENST00000448789 RANBP17Q9H2T7 1088 aaKnown RBP17.24■□□□□ 0.35
RAB5B-202ENST00000448789 GOLPH3LQ9H4A5 285 aa17.24■□□□□ 0.35
RAB5B-202ENST00000448789 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.24■□□□□ 0.35
RAB5B-202ENST00000448789 BIN2Q9UBW5 565 aaPredicted RBP17.24■□□□□ 0.35
RAB5B-202ENST00000448789 FEM1BQ9UK73 627 aa17.24■□□□□ 0.35
RAB5B-202ENST00000448789 AFG3L2Q9Y4W6 797 aa17.24■□□□□ 0.35
RAB5B-202ENST00000448789 TTC38Q5R3I4 469 aa17.23■□□□□ 0.35
RAB5B-202ENST00000448789 REXO1Q8N1G1 1221 aaKnown RBP17.23■□□□□ 0.35
RAB5B-202ENST00000448789 BICD2Q8TD16 824 aa17.23■□□□□ 0.35
RAB5B-202ENST00000448789 AMNQ9BXJ7 453 aa17.23■□□□□ 0.35
RAB5B-202ENST00000448789 RPAP3Q9H6T3 665 aaPredicted RBP17.23■□□□□ 0.35
RAB5B-202ENST00000448789 NMRK2Q9NPI5 230 aa17.23■□□□□ 0.35
RAB5B-202ENST00000448789 RIC8AQ9NPQ8 531 aa17.23■□□□□ 0.35
RAB5B-202ENST00000448789 NOL7Q9UMY1 257 aaKnown RBP17.23■□□□□ 0.35
RAB5B-202ENST00000448789 CCDC194A0A1B0GVG4 234 aa17.22■□□□□ 0.35
RAB5B-202ENST00000448789 GOLGA6L4A6NEF3 574 aa17.22■□□□□ 0.35
RAB5B-202ENST00000448789 OPLAHO14841 1288 aa17.22■□□□□ 0.35
RAB5B-202ENST00000448789 NF2P35240 595 aa17.22■□□□□ 0.35
RAB5B-202ENST00000448789 IREB2P48200 963 aaKnown RBP17.22■□□□□ 0.35
RAB5B-202ENST00000448789 USP14P54578 494 aa17.22■□□□□ 0.35
RAB5B-202ENST00000448789 ZNF174Q15697 407 aa17.22■□□□□ 0.35
RAB5B-202ENST00000448789 INF2Q27J81 1249 aa17.22■□□□□ 0.35
RAB5B-202ENST00000448789 CCDC174Q6PII3 467 aa17.22■□□□□ 0.35
RAB5B-202ENST00000448789 C12orf42Q96LP6 360 aa17.22■□□□□ 0.35
RAB5B-202ENST00000448789 TANGO6Q9C0B7 1094 aa17.22■□□□□ 0.35
RAB5B-202ENST00000448789 ELP3Q9H9T3 547 aa17.22■□□□□ 0.35
RAB5B-202ENST00000448789 CLK2P49760 499 aaKnown RBP17.21■□□□□ 0.35
RAB5B-202ENST00000448789 GRIN1Q05586 938 aa17.21■□□□□ 0.35
RAB5B-202ENST00000448789 TTLL12Q14166 644 aaPredicted RBP17.21■□□□□ 0.35
RAB5B-202ENST00000448789 KRT25Q7Z3Z0 450 aa17.21■□□□□ 0.35
RAB5B-202ENST00000448789 CCAR1Q8IX12 1150 aaKnown RBP17.21■□□□□ 0.35
RAB5B-202ENST00000448789 CLIC6Q96NY7 704 aa17.21■□□□□ 0.35
RAB5B-202ENST00000448789 SLF1Q9BQI6 1058 aa17.21■□□□□ 0.35
RAB5B-202ENST00000448789 CSADQ9Y600 493 aa17.21■□□□□ 0.35
RAB5B-202ENST00000448789 USP17L15C9J2P7 530 aa17.21■□□□□ 0.34
RAB5B-202ENST00000448789 USP17L13C9JLJ4 530 aa17.21■□□□□ 0.34
RAB5B-202ENST00000448789 USP17L11C9JVI0 530 aa17.21■□□□□ 0.34
RAB5B-202ENST00000448789 USP17L18D6R9N7 530 aa17.21■□□□□ 0.34
RAB5B-202ENST00000448789 USP17L22D6RA61 530 aa17.21■□□□□ 0.34
RAB5B-202ENST00000448789 USP17L17D6RBQ6 530 aa17.21■□□□□ 0.34
RAB5B-202ENST00000448789 USP17L19D6RCP7 530 aa17.21■□□□□ 0.34
RAB5B-202ENST00000448789 USP17L20D6RJB6 530 aa17.21■□□□□ 0.34
RAB5B-202ENST00000448789 PPP6R2O75170 966 aa17.21■□□□□ 0.34
RAB5B-202ENST00000448789 TRAPPC10P48553 1259 aa17.21■□□□□ 0.34
RAB5B-202ENST00000448789 USP17L24Q0WX57 530 aa17.21■□□□□ 0.34
RAB5B-202ENST00000448789 MAP3K11Q16584 847 aa17.21■□□□□ 0.34
RAB5B-202ENST00000448789 USP17L6PQ6QN14 398 aa17.21■□□□□ 0.34
RAB5B-202ENST00000448789 ZNF526Q8TF50 670 aaPredicted RBP17.21■□□□□ 0.34
RAB5B-202ENST00000448789 CUL5Q93034 780 aa17.21■□□□□ 0.34
RAB5B-202ENST00000448789 P2RX7Q99572 595 aaKnown RBP17.21■□□□□ 0.34
RAB5B-202ENST00000448789 PSTPIP2Q9H939 334 aa17.21■□□□□ 0.34
RAB5B-202ENST00000448789 FBXO2Q9UK22 296 aaPredicted RBP17.21■□□□□ 0.34
RAB5B-202ENST00000448789 ZNF536O15090 1300 aa17.2■□□□□ 0.34
RAB5B-202ENST00000448789 EDIL3O43854 480 aa17.2■□□□□ 0.34
RAB5B-202ENST00000448789 NR1I2O75469 434 aa17.2■□□□□ 0.34
RAB5B-202ENST00000448789 FLOT1O75955 427 aa17.2■□□□□ 0.34
RAB5B-202ENST00000448789 MCM7P33993 719 aa17.2■□□□□ 0.34
RAB5B-202ENST00000448789 NONOQ15233 471 aaKnown RBP eCLIP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms