RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 HAUS3Q68CZ6 603 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 NAIF1Q69YI7 327 aaPredicted RBP17.85■□□□□ 0.45
CNOT3-204ENST00000447684 PARP9Q8IXQ6 854 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 MAGEC2Q9UBF1 373 aaPredicted RBP17.85■□□□□ 0.45
CNOT3-204ENST00000447684 FAM153AQ9UHL3 310 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 CAPN11Q9UMQ6 739 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 PPP1R12BO60237 982 aaPredicted RBP17.85■□□□□ 0.45
CNOT3-204ENST00000447684 DEXIO95424 95 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 GBP2P32456 591 aaPredicted RBP17.85■□□□□ 0.45
CNOT3-204ENST00000447684 CARSP49589 748 aaKnown RBP17.85■□□□□ 0.45
CNOT3-204ENST00000447684 CCDC57Q2TAC2 916 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 KDM7AQ6ZMT4 941 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 FNBP4Q8N3X1 1017 aaPredicted RBP17.85■□□□□ 0.45
CNOT3-204ENST00000447684 ANKRD13CQ8N6S4 541 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 TRIM47Q96LD4 638 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 CCDC42Q96M95 316 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 CWC25Q9NXE8 425 aaPredicted RBP17.85■□□□□ 0.45
CNOT3-204ENST00000447684 TBC1D2BQ9UPU7 963 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 MYO5AQ9Y4I1 1855 aaKnown RBP17.85■□□□□ 0.45
CNOT3-204ENST00000447684 SKAP2O75563 359 aaPredicted RBP17.85■□□□□ 0.45
CNOT3-204ENST00000447684 CYB5D1Q6P9G0 228 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 SGMS1Q86VZ5 419 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 TEX11Q8IYF3 940 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 OSBPL9Q96SU4 736 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 UBAC1Q9BSL1 405 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 ZBTB3Q9H5J0 574 aa17.85■□□□□ 0.45
CNOT3-204ENST00000447684 LGALS16A8MUM7 142 aa17.84■□□□□ 0.45
CNOT3-204ENST00000447684 PATL2C9JE40 543 aaKnown RBP17.84■□□□□ 0.45
CNOT3-204ENST00000447684 PLEKP08567 350 aaPredicted RBP17.84■□□□□ 0.45
CNOT3-204ENST00000447684 GUCY2DQ02846 1103 aa17.84■□□□□ 0.45
CNOT3-204ENST00000447684 CYB5RLQ6IPT4 315 aa17.84■□□□□ 0.45
CNOT3-204ENST00000447684 RBM33Q96EV2 1170 aaKnown RBP17.84■□□□□ 0.45
CNOT3-204ENST00000447684 RBM12Q9NTZ6 932 aaKnown RBP17.84■□□□□ 0.45
CNOT3-204ENST00000447684 PARP4Q9UKK3 1724 aaKnown RBP17.84■□□□□ 0.45
CNOT3-204ENST00000447684 MDH1P40925 334 aaKnown RBP17.84■□□□□ 0.45
CNOT3-204ENST00000447684 YTHDF3Q7Z739 585 aaKnown RBP17.84■□□□□ 0.45
CNOT3-204ENST00000447684 TRIM58Q8NG06 486 aa17.84■□□□□ 0.45
CNOT3-204ENST00000447684 NOC3LQ8WTT2 800 aaKnown RBP17.84■□□□□ 0.45
CNOT3-204ENST00000447684 MS4A14Q96JA4 679 aa17.84■□□□□ 0.45
CNOT3-204ENST00000447684 EPB41L5Q9HCM4 733 aa17.84■□□□□ 0.45
CNOT3-204ENST00000447684 NUTM2BA6NNL0 878 aaPredicted RBP17.83■□□□□ 0.45
CNOT3-204ENST00000447684 NUTM2EB1AL46 878 aaPredicted RBP17.83■□□□□ 0.45
CNOT3-204ENST00000447684 USO1O60763 962 aaKnown RBP17.83■□□□□ 0.45
CNOT3-204ENST00000447684 CEBPAP49715 358 aaPredicted RBP17.83■□□□□ 0.45
CNOT3-204ENST00000447684 WTAPQ15007 396 aa17.83■□□□□ 0.45
CNOT3-204ENST00000447684 IRF2BP1Q8IU81 584 aa17.83■□□□□ 0.45
CNOT3-204ENST00000447684 CRACR2BQ8N4Y2 399 aaPredicted RBP17.83■□□□□ 0.45
CNOT3-204ENST00000447684 RASSF8Q8NHQ8 419 aa17.83■□□□□ 0.45
CNOT3-204ENST00000447684 FAXDC2Q96IV6 333 aa17.83■□□□□ 0.45
CNOT3-204ENST00000447684 IFIH1Q9BYX4 1025 aaKnown RBP17.83■□□□□ 0.45
CNOT3-204ENST00000447684 NAPBQ9H115 298 aa17.83■□□□□ 0.45
CNOT3-204ENST00000447684 BCCIPQ9P287 314 aaKnown RBP eCLIP17.83■□□□□ 0.45
CNOT3-204ENST00000447684 ABCC12Q96J65 1359 aa17.83■□□□□ 0.44
CNOT3-204ENST00000447684 PPP1R12AO14974 1030 aaPredicted RBP17.83■□□□□ 0.44
CNOT3-204ENST00000447684 RNASE9P60153 205 aaKnown RBP17.83■□□□□ 0.44
CNOT3-204ENST00000447684 SF3A3Q12874 501 aaKnown RBP eCLIP17.83■□□□□ 0.443e-6■■■■□ 25.6
CNOT3-204ENST00000447684 TYW1BQ6NUM6 668 aa17.83■□□□□ 0.44
CNOT3-204ENST00000447684 TBC1D31Q96DN5 1066 aa17.83■□□□□ 0.44
CNOT3-204ENST00000447684 CYFIP2Q96F07 1278 aa17.83■□□□□ 0.44
CNOT3-204ENST00000447684 TRIM6Q9C030 488 aaPredicted RBP17.83■□□□□ 0.44
CNOT3-204ENST00000447684 AXIN2Q9Y2T1 843 aa17.83■□□□□ 0.44
CNOT3-204ENST00000447684 A0A1B0GUA9 196 aa17.82■□□□□ 0.44
CNOT3-204ENST00000447684 FAM107AO95990 144 aa17.82■□□□□ 0.44
CNOT3-204ENST00000447684 PHKG2P15735 406 aa17.82■□□□□ 0.44
CNOT3-204ENST00000447684 PMS1P54277 932 aaKnown RBP17.82■□□□□ 0.44
CNOT3-204ENST00000447684 TBC1D8BQ0IIM8 1120 aa17.82■□□□□ 0.44
CNOT3-204ENST00000447684 PTGDRQ13258 359 aa17.82■□□□□ 0.44
CNOT3-204ENST00000447684 SPRED3Q2MJR0 410 aa17.82■□□□□ 0.44
CNOT3-204ENST00000447684 ZNF532Q9HCE3 1301 aa17.82■□□□□ 0.44
CNOT3-204ENST00000447684 ERICH2A1L162 156 aa17.82■□□□□ 0.44
CNOT3-204ENST00000447684 OPLAHO14841 1288 aa17.82■□□□□ 0.44
CNOT3-204ENST00000447684 HEXIM1O94992 359 aaKnown RBP17.82■□□□□ 0.44
CNOT3-204ENST00000447684 RPN1P04843 607 aaKnown RBP17.82■□□□□ 0.44
CNOT3-204ENST00000447684 GLI1P08151 1106 aa17.82■□□□□ 0.44
CNOT3-204ENST00000447684 LIFRP42702 1097 aa17.82■□□□□ 0.44
CNOT3-204ENST00000447684 WLSQ5T9L3 541 aa17.82■□□□□ 0.44
CNOT3-204ENST00000447684 ZNF658Q5TYW1 1059 aaPredicted RBP17.82■□□□□ 0.44
CNOT3-204ENST00000447684 TTLL7Q6ZT98 887 aa17.82■□□□□ 0.44
CNOT3-204ENST00000447684 CAVIN3Q969G5 261 aa17.82■□□□□ 0.44
CNOT3-204ENST00000447684 TPX2Q9ULW0 747 aaKnown RBP17.82■□□□□ 0.44
CNOT3-204ENST00000447684 H7C1D1 291 aa17.81■□□□□ 0.44
CNOT3-204ENST00000447684 ADD2P35612 726 aa17.81■□□□□ 0.44
CNOT3-204ENST00000447684 MCAMP43121 646 aa17.81■□□□□ 0.44
CNOT3-204ENST00000447684 IFT20Q8IY31 132 aa17.81■□□□□ 0.44
CNOT3-204ENST00000447684 FUKQ8N0W3 1084 aa17.81■□□□□ 0.44
CNOT3-204ENST00000447684 MTRQ99707 1265 aa17.81■□□□□ 0.44
CNOT3-204ENST00000447684 ZNF330Q9Y3S2 320 aaPredicted RBP17.81■□□□□ 0.44
CNOT3-204ENST00000447684 HYOU1Q9Y4L1 999 aa17.81■□□□□ 0.44
CNOT3-204ENST00000447684 GOLGA6L10A6NI86 522 aa17.81■□□□□ 0.44
CNOT3-204ENST00000447684 ODF2Q5BJF6 829 aa17.81■□□□□ 0.44
CNOT3-204ENST00000447684 FERMT2Q96AC1 680 aa17.81■□□□□ 0.44
CNOT3-204ENST00000447684 NUP188Q5SRE5 1749 aa17.81■□□□□ 0.44
CNOT3-204ENST00000447684 ZNF263O14978 683 aa17.8■□□□□ 0.44
CNOT3-204ENST00000447684 KRT2P35908 639 aa17.8■□□□□ 0.44
CNOT3-204ENST00000447684 TCIRG1Q13488 830 aa17.8■□□□□ 0.44
CNOT3-204ENST00000447684 ATP6V1G3Q96LB4 118 aa17.8■□□□□ 0.44
CNOT3-204ENST00000447684 ALS2CR12Q96Q35 445 aa17.8■□□□□ 0.44
CNOT3-204ENST00000447684 TSGA10Q9BZW7 698 aa17.8■□□□□ 0.44
CNOT3-204ENST00000447684 ANKRD18BA2A2Z9 1011 aa17.8■□□□□ 0.44
CNOT3-204ENST00000447684 DNM1LO00429 736 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms