RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 SSC5DA1L4H1 1573 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.86□□□□□ -0.51
LIN54-203ENST00000446851 SPDYE3A6NKU9 549 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 FKTNO75072 461 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 CD2BP2O95400 341 aaKnown RBP11.86□□□□□ -0.51
LIN54-203ENST00000446851 FCER1AP12319 257 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 EIF2AK2P19525 551 aaKnown RBP11.86□□□□□ -0.51
LIN54-203ENST00000446851 ERVK-9P63128 1117 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 ERVK-24P63145 666 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 RASGRP4Q8TDF6 673 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 SPATC1LQ9H0A9 340 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 RTEL1Q9NZ71 1219 aa11.86□□□□□ -0.51
LIN54-203ENST00000446851 VWA5AO00534 786 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 TLR2O60603 784 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 TOB2Q14106 344 aaPredicted RBP11.85□□□□□ -0.51
LIN54-203ENST00000446851 LARP1BQ659C4 914 aaKnown RBP11.85□□□□□ -0.51
LIN54-203ENST00000446851 USP17L6PQ6QN14 398 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 SRBD1Q8N5C6 995 aaKnown RBP11.85□□□□□ -0.51
LIN54-203ENST00000446851 BRMS1Q9HCU9 246 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 FOXN1O15353 648 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 SCRN1Q12765 414 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 TROAPQ12815 778 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 UBE2SQ16763 222 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 C8orf76Q96K31 380 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 MMP19Q99542 508 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 GINM1Q9NU53 330 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 RBM28Q9NW13 759 aaKnown RBP11.85□□□□□ -0.51
LIN54-203ENST00000446851 ZMYM6O95789 1325 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 DDAH1O94760 285 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 ELNP15502 786 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 DSG3P32926 999 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 FCGRTP55899 365 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 SEC23AQ15436 765 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 PURBQ96QR8 312 aaKnown RBP11.85□□□□□ -0.51
LIN54-203ENST00000446851 KCNH4Q9UQ05 1017 aa11.85□□□□□ -0.51
LIN54-203ENST00000446851 GCLCP48506 637 aaPredicted RBP11.84□□□□□ -0.51
LIN54-203ENST00000446851 EXOSC10Q01780 885 aaKnown RBP11.84□□□□□ -0.51
LIN54-203ENST00000446851 ZSCAN31Q96LW9 406 aaPredicted RBP11.84□□□□□ -0.51
LIN54-203ENST00000446851 MOV10L1Q9BXT6 1211 aaKnown RBP11.84□□□□□ -0.51
LIN54-203ENST00000446851 TM6SF1Q9BZW5 370 aa11.84□□□□□ -0.51
LIN54-203ENST00000446851 BTBD7Q9P203 1132 aa11.84□□□□□ -0.51
LIN54-203ENST00000446851 TESPA1A2RU30 521 aaPredicted RBP11.84□□□□□ -0.51
LIN54-203ENST00000446851 BAATQ14032 418 aaPredicted RBP11.84□□□□□ -0.51
LIN54-203ENST00000446851 TMEM132BQ14DG7 1078 aa11.84□□□□□ -0.51
LIN54-203ENST00000446851 ANKRD23Q86SG2 305 aa11.84□□□□□ -0.51
LIN54-203ENST00000446851 PSTPIP2Q9H939 334 aa11.84□□□□□ -0.51
LIN54-203ENST00000446851 SMCO2A6NFE2 343 aa11.84□□□□□ -0.51
LIN54-203ENST00000446851 FAM155AB1AL88 458 aaPredicted RBP11.84□□□□□ -0.51
LIN54-203ENST00000446851 HOXD10P28358 340 aa11.84□□□□□ -0.51
LIN54-203ENST00000446851 RASSF8Q8NHQ8 419 aa11.84□□□□□ -0.51
LIN54-203ENST00000446851 JMJD4Q9H9V9 463 aa11.84□□□□□ -0.51
LIN54-203ENST00000446851 RIPK3Q9Y572 518 aa11.84□□□□□ -0.51
LIN54-203ENST00000446851 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.84□□□□□ -0.51
LIN54-203ENST00000446851 CCDC194A0A1B0GVG4 234 aa11.83□□□□□ -0.52
LIN54-203ENST00000446851 FLT3LGP49771 235 aa11.83□□□□□ -0.52
LIN54-203ENST00000446851 ARHGEF16Q5VV41 709 aa11.83□□□□□ -0.52
LIN54-203ENST00000446851 RNF207Q6ZRF8 634 aa11.83□□□□□ -0.52
LIN54-203ENST00000446851 TBC1D5Q92609 795 aa11.83□□□□□ -0.52
LIN54-203ENST00000446851 NUDT12Q9BQG2 462 aa11.83□□□□□ -0.52
LIN54-203ENST00000446851 K7ELQ4 463 aaPredicted RBP11.83□□□□□ -0.52
LIN54-203ENST00000446851 NFIBO00712 420 aa11.83□□□□□ -0.52
LIN54-203ENST00000446851 CTCFP49711 727 aaPredicted RBP11.83□□□□□ -0.52
LIN54-203ENST00000446851 RABGAP1Q9Y3P9 1069 aa11.83□□□□□ -0.52
LIN54-203ENST00000446851 RBM19Q9Y4C8 960 aaKnown RBP11.83□□□□□ -0.52
LIN54-203ENST00000446851 WDR90Q96KV7 1748 aa11.83□□□□□ -0.52
LIN54-203ENST00000446851 ZBTB5O15062 677 aa11.83□□□□□ -0.52
LIN54-203ENST00000446851 GJB2P29033 226 aa11.83□□□□□ -0.52
LIN54-203ENST00000446851 GRM4Q14833 912 aa11.83□□□□□ -0.52
LIN54-203ENST00000446851 SEPT14Q6ZU15 432 aa11.83□□□□□ -0.52
LIN54-203ENST00000446851 RBPJLQ9UBG7 517 aa11.83□□□□□ -0.52
LIN54-203ENST00000446851 MAD2L2Q9UI95 211 aa11.83□□□□□ -0.52
LIN54-203ENST00000446851 MRPL11Q9Y3B7 192 aaKnown RBP11.83□□□□□ -0.52
LIN54-203ENST00000446851 CCDC85CA6NKD9 419 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 RBM25P49756 843 aaKnown RBP11.82□□□□□ -0.52
LIN54-203ENST00000446851 MAP3K10Q02779 954 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 SLC9C1Q4G0N8 1177 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 METTL16Q86W50 562 aaKnown RBP11.82□□□□□ -0.52
LIN54-203ENST00000446851 ACAD9Q9H845 621 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 TCP11L1Q9NUJ3 509 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 CENPFP49454 3210 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 IBSPP21815 317 aaPredicted RBP11.82□□□□□ -0.52
LIN54-203ENST00000446851 TMTC3Q6ZXV5 915 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 PLEKHH3Q7Z736 793 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 GMCL1P1Q8NEA9 526 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 SH3TC2Q8TF17 1288 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 SLC5A4Q9NY91 659 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 CNPY2Q9Y2B0 182 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 MYH1P12882 1939 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 DDX39AO00148 427 aaKnown RBP11.82□□□□□ -0.52
LIN54-203ENST00000446851 CYP2C19P33261 490 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 CNTN2Q02246 1040 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 GPAT2Q6NUI2 795 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 MKL1Q969V6 931 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 GMCL1Q96IK5 515 aa11.82□□□□□ -0.52
LIN54-203ENST00000446851 SH2B1Q9NRF2 756 aaPredicted RBP11.82□□□□□ -0.52
LIN54-203ENST00000446851 GCOM1H8Y6P7 765 aaPredicted RBP11.81□□□□□ -0.52
LIN54-203ENST00000446851 POLR2MP0CAP2 368 aa11.81□□□□□ -0.52
LIN54-203ENST00000446851 MCM2P49736 904 aa11.81□□□□□ -0.52
LIN54-203ENST00000446851 MRPL12P52815 198 aaKnown RBP11.81□□□□□ -0.52
LIN54-203ENST00000446851 C6orf50Q9HD87 102 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms