RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 SLC16A2P36021 539 aa9.24□□□□□ -0.93
CCDC39-201ENST00000442201 NAPAP54920 295 aa9.24□□□□□ -0.93
CCDC39-201ENST00000442201 NPY5RQ15761 445 aa9.24□□□□□ -0.93
CCDC39-201ENST00000442201 PRAMEF18Q5VWM3 479 aa9.24□□□□□ -0.93
CCDC39-201ENST00000442201 LINC00301Q8NCQ3 95 aa9.24□□□□□ -0.93
CCDC39-201ENST00000442201 SYAP1Q96A49 352 aaPredicted RBP9.24□□□□□ -0.93
CCDC39-201ENST00000442201 PNMA6FA0A0J9YX94 578 aa9.24□□□□□ -0.93
CCDC39-201ENST00000442201 GLTPD2A6NH11 291 aa9.24□□□□□ -0.93
CCDC39-201ENST00000442201 ME1P48163 572 aa9.24□□□□□ -0.93
CCDC39-201ENST00000442201 IKQ13123 557 aaPredicted RBP9.24□□□□□ -0.93
CCDC39-201ENST00000442201 TYW1BQ6NUM6 668 aa9.24□□□□□ -0.93
CCDC39-201ENST00000442201 SULF1Q8IWU6 871 aa9.24□□□□□ -0.93
CCDC39-201ENST00000442201 BLIDQ8IZY5 108 aa9.24□□□□□ -0.93
CCDC39-201ENST00000442201 PDLIM2Q96JY6 352 aa9.24□□□□□ -0.93
CCDC39-201ENST00000442201 PCDHA4Q9UN74 947 aa9.24□□□□□ -0.93
CCDC39-201ENST00000442201 MAPK8IP2Q13387 824 aaPredicted RBP9.23□□□□□ -0.93
CCDC39-201ENST00000442201 SPICE1Q8N0Z3 855 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 BICD2Q8TD16 824 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 NUP88Q99567 741 aaPredicted RBP9.23□□□□□ -0.93
CCDC39-201ENST00000442201 FEZ1Q99689 392 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 VCPKMTQ9H867 229 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.23□□□□□ -0.93
CCDC39-201ENST00000442201 USP17L10C9JJH3 530 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 TMEM232C9JQI7 657 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 ZBTB5O15062 677 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 SPTLC2O15270 562 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 GNA11P29992 359 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 INPP5BP32019 993 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 SLC39A14Q15043 492 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 USP50Q70EL3 339 aaPredicted RBP9.23□□□□□ -0.93
CCDC39-201ENST00000442201 DAGLBQ8NCG7 672 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 TNFRSF25Q93038 417 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 PGBD1Q96JS3 809 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 WRNIP1Q96S55 665 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 ZMYND12Q9H0C1 365 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 C6orf50Q9HD87 102 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 UTRNP46939 3433 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 EPHX2P34913 555 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 CCDC84Q86UT8 332 aaPredicted RBP9.23□□□□□ -0.93
CCDC39-201ENST00000442201 JMYQ8N9B5 988 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 MTMR8Q96EF0 704 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 ZNF112Q9UJU3 913 aa9.23□□□□□ -0.93
CCDC39-201ENST00000442201 ESYT2A0FGR8 921 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 CCDC66A2RUB6 948 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 IQCA1LA6NCM1 817 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 SMCO2A6NFE2 343 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 TOB1P50616 345 aaPredicted RBP9.22□□□□□ -0.93
CCDC39-201ENST00000442201 ZYXQ15942 572 aaKnown RBP9.22□□□□□ -0.93
CCDC39-201ENST00000442201 SCYL3Q8IZE3 742 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 ZC3H15Q8WU90 426 aaKnown RBP9.22□□□□□ -0.93
CCDC39-201ENST00000442201 TMEM63CQ9P1W3 806 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 BAZ2BQ9UIF8 2168 aaKnown RBP9.22□□□□□ -0.93
CCDC39-201ENST00000442201 TRIM75PA6NK02 468 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 ATP2B1P20020 1258 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 SYDE2Q5VT97 1194 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 PPP1R18Q6NYC8 613 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 BTNL9Q6UXG8 535 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 PIK3AP1Q6ZUJ8 805 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 TIGD1Q96MW7 591 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 GLIS2Q9BZE0 524 aaPredicted RBP9.22□□□□□ -0.93
CCDC39-201ENST00000442201 PICK1Q9NRD5 415 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 CEP131Q9UPN4 1083 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 CCDC194A0A1B0GVG4 234 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 FAM205CA6NFA0 338 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 TRAPPC10P48553 1259 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 STAT2P52630 851 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 EARS2Q5JPH6 523 aaKnown RBP9.22□□□□□ -0.93
CCDC39-201ENST00000442201 ADALQ6DHV7 355 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 KRT26Q7Z3Y9 468 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 CHURC1Q8WUH1 139 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 COA7Q96BR5 231 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 KIAA1683Q9H0B3 1180 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 PCDHA7Q9UN72 937 aa9.22□□□□□ -0.93
CCDC39-201ENST00000442201 PPP6R2O75170 966 aa9.21□□□□□ -0.93
CCDC39-201ENST00000442201 PTPAQ15257 358 aa9.21□□□□□ -0.93
CCDC39-201ENST00000442201 CDC37Q16543 378 aaPredicted RBP9.21□□□□□ -0.93
CCDC39-201ENST00000442201 QRICH1Q2TAL8 776 aa9.21□□□□□ -0.93
CCDC39-201ENST00000442201 KIAA1755Q5JYT7 1200 aa9.21□□□□□ -0.93
CCDC39-201ENST00000442201 FAM83BQ5T0W9 1011 aa9.21□□□□□ -0.93
CCDC39-201ENST00000442201 KLRG1Q96E93 195 aa9.21□□□□□ -0.93
CCDC39-201ENST00000442201 PRIMPOLQ96LW4 560 aa9.21□□□□□ -0.93
CCDC39-201ENST00000442201 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.21□□□□□ -0.93
CCDC39-201ENST00000442201 ZKSCAN5Q9Y2L8 839 aa9.21□□□□□ -0.93
CCDC39-201ENST00000442201 BMP15O95972 392 aa9.21□□□□□ -0.94
CCDC39-201ENST00000442201 ZSCAN23Q3MJ62 389 aa9.21□□□□□ -0.94
CCDC39-201ENST00000442201 RASGRP4Q8TDF6 673 aa9.21□□□□□ -0.94
CCDC39-201ENST00000442201 LPAR1Q92633 364 aa9.21□□□□□ -0.94
CCDC39-201ENST00000442201 ZKSCAN4Q969J2 545 aaPredicted RBP9.21□□□□□ -0.94
CCDC39-201ENST00000442201 AS3MTQ9HBK9 375 aa9.21□□□□□ -0.94
CCDC39-201ENST00000442201 PCDHB6Q9Y5E3 794 aa9.21□□□□□ -0.94
CCDC39-201ENST00000442201 TCHHQ07283 1943 aa9.21□□□□□ -0.94
CCDC39-201ENST00000442201 A0A1W2PQ27 194 aa9.2□□□□□ -0.94
CCDC39-201ENST00000442201 A0A1W2PQ64 194 aa9.2□□□□□ -0.94
CCDC39-201ENST00000442201 A0A1W2PQD8 194 aa9.2□□□□□ -0.94
CCDC39-201ENST00000442201 ADM5C9JUS6 153 aa9.2□□□□□ -0.94
CCDC39-201ENST00000442201 M0R2N6 131 aa9.2□□□□□ -0.94
CCDC39-201ENST00000442201 PPP1R11O60927 126 aaPredicted RBP9.2□□□□□ -0.94
CCDC39-201ENST00000442201 LIG1P18858 919 aa9.2□□□□□ -0.94
CCDC39-201ENST00000442201 MARCKSP29966 332 aaPredicted RBP9.2□□□□□ -0.94
CCDC39-201ENST00000442201 ADCY7P51828 1080 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms