RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 LLPHQ9BRT6 129 aaKnown RBP8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 MCOLN1Q9GZU1 580 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 TLR2O60603 784 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 HSPD1P10809 573 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 FLT3LGP49771 235 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 GNAQP50148 359 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 LARP1BQ659C4 914 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 CTR9Q6PD62 1173 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 PLEKHH3Q7Z736 793 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 PRPF38AQ8NAV1 312 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 RGS22Q8NE09 1264 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 MAP7D2Q96T17 732 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 SLF1Q9BQI6 1058 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 AP5M1Q9H0R1 490 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 PRDM10Q9NQV6 1147 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 CFBP00751 764 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 MAPK4P31152 587 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 FOSBP53539 338 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 SP4Q02446 784 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 ADGRA1Q86SQ6 560 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 LUZP1Q86V48 1076 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 TMTC2Q8N394 836 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 TSC1Q92574 1164 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 MMP19Q99542 508 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 DSCC1Q9BVC3 393 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 ZMYND15Q9H091 742 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 NBPF3Q9H094 633 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 HSD3B7Q9H2F3 369 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 RAVER2Q9HCJ3 691 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 HMX1Q9NP08 348 aaPredicted RBP8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 PRDM5Q9NQX1 630 aaPredicted RBP8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 DACT1Q9NYF0 836 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 NRBP1Q9UHY1 535 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 CCDC196A0A1B0GTZ2 297 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 HSPA8P11142 646 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 MYCLP12524 364 aaPredicted RBP8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 ZNF75DP51815 510 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 STK3Q13188 491 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 ANKRD23Q86SG2 305 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 PROCA1Q8NCQ7 364 aaPredicted RBP8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 ABHD8Q96I13 439 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 LBHD1Q9BQE6 289 aaPredicted RBP8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 LRRC2Q9BYS8 371 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 VCPKMTQ9H867 229 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 EHMT1Q9H9B1 1298 aa8.44□□□□□ -1.06
CDC42BPA-208ENST00000442054 GOLGA8HP0CJ92 632 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 SLC16A2P36021 539 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 FBXO46Q6PJ61 603 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 RASSF8Q8NHQ8 419 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 SH3TC2Q8TF17 1288 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 SCAND2PQ9GZW5 306 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 UBA5Q9GZZ9 404 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 FBXO40Q9UH90 709 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 HPS5Q9UPZ3 1129 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 KIF3AQ9Y496 699 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 GOLGA8AA7E2F4 631 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 GOLGA8BA8MQT2 603 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 IGF2BP3O00425 579 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 WDR46O15213 610 aaKnown RBP8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 ATP2B1P20020 1258 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 KRT85P78386 507 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 ANO1Q5XXA6 986 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 FAM160B2Q86V87 743 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 PNMA1Q8ND90 353 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 CEP95Q96GE4 821 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 GSG1L2A8MUP6 293 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 ZSCAN20P17040 1043 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 HOXD11P31277 338 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 SAFBQ15424 915 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 Q6ZUG5 572 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 C11orf57Q6ZUT1 292 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 NYAP1Q6ZVC0 841 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 ATG4CQ96DT6 458 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 NEK1Q96PY6 1258 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 BRMS1Q9HCU9 246 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 ADD3Q9UEY8 706 aaKnown RBP8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 RABGAP1Q9Y3P9 1069 aa8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 COL5A3P25940 1745 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-208ENST00000442054 SCN7AQ01118 1682 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 PRC1O43663 620 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 CCDC192P0DO97 292 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 PDE4DQ08499 809 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 MAP3K11Q16584 847 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 ANO6Q4KMQ2 910 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 BRF1Q92994 677 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 HTATIP2Q9BUP3 242 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 DDX19AQ9NUU7 478 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 PNMA2Q9UL42 364 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 KBTBD13C9JR72 458 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 TBC1D12O60347 775 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 ATXN8OSP0DMR3 200 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 ELNP15502 786 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 VCAM1P19320 739 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 PDCP20941 246 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 SYCP1Q15431 976 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 FERMT3Q86UX7 667 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 MB21D1Q8N884 522 aa8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 RRP36Q96EU6 259 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-208ENST00000442054 DEFB118Q96PH6 123 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms