RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.03□□□□□ -0.48
SYN3-204ENST00000441821 FGD4Q96M96 766 aa12.03□□□□□ -0.48
SYN3-204ENST00000441821 EPHX3Q9H6B9 360 aa12.03□□□□□ -0.48
SYN3-204ENST00000441821 ARMT1Q9H993 441 aa12.03□□□□□ -0.48
SYN3-204ENST00000441821 UMODL1Q5DID0 1318 aa12.03□□□□□ -0.48
SYN3-204ENST00000441821 CYP2D7A0A087X1C5 515 aa12.02□□□□□ -0.49
SYN3-204ENST00000441821 USP17L12C9JPN9 530 aa12.02□□□□□ -0.49
SYN3-204ENST00000441821 USP17L21D6R901 530 aa12.02□□□□□ -0.49
SYN3-204ENST00000441821 GOLIM4O00461 696 aa12.02□□□□□ -0.49
SYN3-204ENST00000441821 PRKAB2O43741 272 aa12.02□□□□□ -0.49
SYN3-204ENST00000441821 ZBED4O75132 1171 aa12.02□□□□□ -0.49
SYN3-204ENST00000441821 MYOGP15173 224 aa12.02□□□□□ -0.49
SYN3-204ENST00000441821 ITGA7Q13683 1181 aa12.02□□□□□ -0.49
SYN3-204ENST00000441821 SKIV2LQ15477 1246 aaKnown RBP12.02□□□□□ -0.49
SYN3-204ENST00000441821 TMEM31Q5JXX7 168 aa12.02□□□□□ -0.49
SYN3-204ENST00000441821 ARMCX2Q7L311 632 aa12.02□□□□□ -0.49
SYN3-204ENST00000441821 ANKRD35Q8N283 1001 aa12.02□□□□□ -0.49
SYN3-204ENST00000441821 NOC4LQ9BVI4 516 aaKnown RBP12.02□□□□□ -0.49
SYN3-204ENST00000441821 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.02□□□□□ -0.49
SYN3-204ENST00000441821 KATNBL1Q9H079 304 aa12.02□□□□□ -0.49
SYN3-204ENST00000441821 FBXO40Q9UH90 709 aa12.02□□□□□ -0.49
SYN3-204ENST00000441821 COG5Q9UP83 839 aa12.02□□□□□ -0.49
SYN3-204ENST00000441821 MTCH2Q9Y6C9 303 aa12.02□□□□□ -0.49
SYN3-204ENST00000441821 MYO9BQ13459 2157 aa12.02□□□□□ -0.49
SYN3-204ENST00000441821 F5H6K3 240 aa12.01□□□□□ -0.49
SYN3-204ENST00000441821 GTPBP6O43824 516 aaPredicted RBP12.01□□□□□ -0.49
SYN3-204ENST00000441821 MBD4O95243 580 aa12.01□□□□□ -0.49
SYN3-204ENST00000441821 CCL23P55773 120 aa12.01□□□□□ -0.49
SYN3-204ENST00000441821 BEX3Q00994 111 aa12.01□□□□□ -0.49
SYN3-204ENST00000441821 KLRC3Q07444 240 aa12.01□□□□□ -0.49
SYN3-204ENST00000441821 CXCL17Q6UXB2 119 aa12.01□□□□□ -0.49
SYN3-204ENST00000441821 CCDC144CPQ8IYA2 1237 aa12.01□□□□□ -0.49
SYN3-204ENST00000441821 CPXCR1Q8N123 301 aa12.01□□□□□ -0.49
SYN3-204ENST00000441821 CHST13Q8NET6 341 aa12.01□□□□□ -0.49
SYN3-204ENST00000441821 NUP88Q99567 741 aaPredicted RBP12.01□□□□□ -0.49
SYN3-204ENST00000441821 WNT8AQ9H1J5 351 aa12.01□□□□□ -0.49
SYN3-204ENST00000441821 EXOC6BQ9Y2D4 811 aa12.01□□□□□ -0.49
SYN3-204ENST00000441821 BAZ2AQ9UIF9 1905 aaKnown RBP12□□□□□ -0.49
SYN3-204ENST00000441821 TLL1O43897 1013 aa12□□□□□ -0.49
SYN3-204ENST00000441821 NDUFB10O96000 172 aa12□□□□□ -0.49
SYN3-204ENST00000441821 ATP2A2P16615 1042 aaKnown RBP12□□□□□ -0.49
SYN3-204ENST00000441821 ADD2P35612 726 aa12□□□□□ -0.49
SYN3-204ENST00000441821 SLC4A3P48751 1232 aa12□□□□□ -0.49
SYN3-204ENST00000441821 TNFAIP2Q03169 654 aa12□□□□□ -0.49
SYN3-204ENST00000441821 FSCN1Q16658 493 aaKnown RBP12□□□□□ -0.49
SYN3-204ENST00000441821 TMEM67Q5HYA8 995 aa12□□□□□ -0.49
SYN3-204ENST00000441821 VWCEQ96DN2 955 aa12□□□□□ -0.49
SYN3-204ENST00000441821 DDRGK1Q96HY6 314 aa12□□□□□ -0.49
SYN3-204ENST00000441821 DNAJC2Q99543 621 aaKnown RBP12□□□□□ -0.49
SYN3-204ENST00000441821 TRPV6Q9H1D0 765 aa12□□□□□ -0.49
SYN3-204ENST00000441821 SLC38A10Q9HBR0 1119 aa12□□□□□ -0.49
SYN3-204ENST00000441821 NYAP2Q9P242 653 aa12□□□□□ -0.49
SYN3-204ENST00000441821 GNEQ9Y223 722 aaKnown RBP12□□□□□ -0.49
SYN3-204ENST00000441821 CTDP1Q9Y5B0 961 aaPredicted RBP12□□□□□ -0.49
SYN3-204ENST00000441821 ASTN1O14525 1302 aa12□□□□□ -0.49
SYN3-204ENST00000441821 GRIN2DO15399 1336 aa12□□□□□ -0.49
SYN3-204ENST00000441821 ZBED9Q6R2W3 1325 aa12□□□□□ -0.49
SYN3-204ENST00000441821 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.99□□□□□ -0.49
SYN3-204ENST00000441821 ZBBXA8MT70 800 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 CCER2I3L3R5 266 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 RFXAPO00287 272 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 ZEB2O60315 1214 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 B4GALT4O60513 344 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 GPR37L1O60883 481 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 PFKMP08237 780 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 OAZ1P54368 228 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 SLFNL1Q499Z3 407 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 HSP90AB4PQ58FF6 505 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 CEP85Q6P2H3 762 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 CTR9Q6PD62 1173 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 NOL8Q76FK4 1167 aaKnown RBP11.99□□□□□ -0.49
SYN3-204ENST00000441821 TLK2Q86UE8 772 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 RHPN1Q8TCX5 695 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 AGBL1Q96MI9 1066 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 RAVER2Q9HCJ3 691 aaKnown RBP11.99□□□□□ -0.49
SYN3-204ENST00000441821 IL1RAPL2Q9NP60 686 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 WDFY4Q6ZS81 3184 aa11.99□□□□□ -0.49
SYN3-204ENST00000441821 MCM3APO60318 1980 aa11.98□□□□□ -0.49
SYN3-204ENST00000441821 GREB1LQ9C091 1923 aaPredicted RBP11.98□□□□□ -0.49
SYN3-204ENST00000441821 CA3P07451 260 aa11.98□□□□□ -0.49
SYN3-204ENST00000441821 CNTN2Q02246 1040 aa11.98□□□□□ -0.49
SYN3-204ENST00000441821 ITPRIPQ8IWB1 547 aa11.98□□□□□ -0.49
SYN3-204ENST00000441821 CLASRPQ8N2M8 674 aaKnown RBP11.98□□□□□ -0.49
SYN3-204ENST00000441821 FAM133AQ8N9E0 248 aa11.98□□□□□ -0.49
SYN3-204ENST00000441821 HLA-CQ95604 372 aa11.98□□□□□ -0.49
SYN3-204ENST00000441821 KIFC2Q96AC6 838 aa11.98□□□□□ -0.49
SYN3-204ENST00000441821 SCLYQ96I15 445 aa11.98□□□□□ -0.49
SYN3-204ENST00000441821 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.98□□□□□ -0.49
SYN3-204ENST00000441821 AP5M1Q9H0R1 490 aa11.98□□□□□ -0.49
SYN3-204ENST00000441821 PAG1Q9NWQ8 432 aa11.98□□□□□ -0.49
SYN3-204ENST00000441821 FEM1BQ9UK73 627 aa11.98□□□□□ -0.49
SYN3-204ENST00000441821 Q9Y3F1 56 aa11.98□□□□□ -0.49
SYN3-204ENST00000441821 SLC4A4Q9Y6R1 1079 aa11.98□□□□□ -0.49
SYN3-204ENST00000441821 LRRC37A2A6NM11 1700 aa11.97□□□□□ -0.49
SYN3-204ENST00000441821 ASB14A6NK59 587 aa11.97□□□□□ -0.49
SYN3-204ENST00000441821 DYNC1LI2O43237 492 aaPredicted RBP11.97□□□□□ -0.49
SYN3-204ENST00000441821 IFIT2P09913 472 aaKnown RBP11.97□□□□□ -0.49
SYN3-204ENST00000441821 FDX1P10109 184 aa11.97□□□□□ -0.49
SYN3-204ENST00000441821 TTLL4Q14679 1199 aa11.97□□□□□ -0.49
SYN3-204ENST00000441821 UBE3CQ15386 1083 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms