RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 PPP2R2AP63151 447 aa7.36□□□□□ -1.23
PFDN4-202ENST00000441080 PLCL1Q15111 1095 aa7.36□□□□□ -1.23
PFDN4-202ENST00000441080 GTF2IRD2BQ6EKJ0 949 aa7.36□□□□□ -1.23
PFDN4-202ENST00000441080 NOP9Q86U38 636 aaKnown RBP7.36□□□□□ -1.23
PFDN4-202ENST00000441080 GTF2IRD2Q86UP8 949 aa7.36□□□□□ -1.23
PFDN4-202ENST00000441080 SLC12A9Q9BXP2 914 aa7.36□□□□□ -1.23
PFDN4-202ENST00000441080 SLAMF8Q9P0V8 285 aa7.36□□□□□ -1.23
PFDN4-202ENST00000441080 GSTM1P09488 218 aa7.35□□□□□ -1.23
PFDN4-202ENST00000441080 IFNGR1P15260 489 aa7.35□□□□□ -1.23
PFDN4-202ENST00000441080 RPL10P27635 214 aaKnown RBP7.35□□□□□ -1.23
PFDN4-202ENST00000441080 HSP90AA2PQ14568 343 aaPredicted RBP7.35□□□□□ -1.23
PFDN4-202ENST00000441080 RTP2Q5QGT7 225 aa7.35□□□□□ -1.23
PFDN4-202ENST00000441080 WAPLQ7Z5K2 1190 aa7.35□□□□□ -1.23
PFDN4-202ENST00000441080 PI4K2BQ8TCG2 481 aa7.35□□□□□ -1.23
PFDN4-202ENST00000441080 FCRL3Q96P31 734 aaPredicted RBP7.35□□□□□ -1.23
PFDN4-202ENST00000441080 ALPK1Q96QP1 1244 aa7.35□□□□□ -1.23
PFDN4-202ENST00000441080 AARSD1Q9BTE6 412 aaKnown RBP7.35□□□□□ -1.23
PFDN4-202ENST00000441080 CDADC1Q9BWV3 514 aa7.35□□□□□ -1.23
PFDN4-202ENST00000441080 ZFP64Q9NPA5 681 aa7.35□□□□□ -1.23
PFDN4-202ENST00000441080 PRDM7Q9NQW5 492 aa7.35□□□□□ -1.23
PFDN4-202ENST00000441080 TMEM82A0PJX8 343 aa7.34□□□□□ -1.23
PFDN4-202ENST00000441080 SLC23A3Q6PIS1 610 aa7.34□□□□□ -1.23
PFDN4-202ENST00000441080 MCMBPQ9BTE3 642 aa7.34□□□□□ -1.23
PFDN4-202ENST00000441080 NKX2-4Q9H2Z4 354 aa7.34□□□□□ -1.23
PFDN4-202ENST00000441080 ARHGEF4Q9NR80 690 aa7.34□□□□□ -1.23
PFDN4-202ENST00000441080 AP5S1Q9NUS5 200 aa7.34□□□□□ -1.23
PFDN4-202ENST00000441080 BACE2Q9Y5Z0 518 aa7.34□□□□□ -1.23
PFDN4-202ENST00000441080 AURKAO14965 403 aa7.33□□□□□ -1.24
PFDN4-202ENST00000441080 ADCY3O60266 1144 aa7.33□□□□□ -1.24
PFDN4-202ENST00000441080 SNRPB2P08579 225 aaKnown RBP7.33□□□□□ -1.24
PFDN4-202ENST00000441080 ZPBP2Q6X784 338 aa7.33□□□□□ -1.24
PFDN4-202ENST00000441080 LILRB2Q8N423 598 aa7.33□□□□□ -1.24
PFDN4-202ENST00000441080 CYP26B1Q9NR63 512 aa7.33□□□□□ -1.24
PFDN4-202ENST00000441080 DNAJC25-GNG10A0A024R161 153 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 TRAV20A0A0B4J274 112 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 LOC100996750A0A140TA64 210 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 C2orf71A6NGG8 1288 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 HOXC12P31275 282 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 GRIA2P42262 883 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 KCNJ6P48051 423 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 SEPHS1P49903 392 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 SCRN1Q12765 414 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 C2orf27AQ580R0 203 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 RALGPS1Q5JS13 557 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 RCSD1Q6JBY9 416 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 KSR1Q8IVT5 923 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 NAT16Q8N8M0 369 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 ZBTB38Q8NAP3 1195 aaPredicted RBP7.32□□□□□ -1.24
PFDN4-202ENST00000441080 THAP3Q8WTV1 239 aaPredicted RBP7.32□□□□□ -1.24
PFDN4-202ENST00000441080 IER2Q9BTL4 223 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 KRTAP4-6Q9BYQ5 205 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 ADAMTS10Q9H324 1103 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 TMEM59LQ9UK28 342 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 ADAMTS6Q9UKP5 1117 aa7.32□□□□□ -1.24
PFDN4-202ENST00000441080 CAPNS1P04632 268 aa7.31□□□□□ -1.24
PFDN4-202ENST00000441080 FAM153BP0C7A2 387 aa7.31□□□□□ -1.24
PFDN4-202ENST00000441080 ECI1P42126 302 aa7.31□□□□□ -1.24
PFDN4-202ENST00000441080 GP2P55259 537 aaKnown RBP7.31□□□□□ -1.24
PFDN4-202ENST00000441080 DUSP4Q13115 394 aa7.31□□□□□ -1.24
PFDN4-202ENST00000441080 EEF1DP3Q658K8 133 aa7.31□□□□□ -1.24
PFDN4-202ENST00000441080 GIMAP6Q6P9H5 292 aa7.31□□□□□ -1.24
PFDN4-202ENST00000441080 SH3TC2Q8TF17 1288 aa7.31□□□□□ -1.24
PFDN4-202ENST00000441080 CCDC120Q96HB5 630 aa7.31□□□□□ -1.24
PFDN4-202ENST00000441080 FCRL2Q96LA5 508 aaPredicted RBP7.31□□□□□ -1.24
PFDN4-202ENST00000441080 CCDC140Q96MF4 163 aa7.31□□□□□ -1.24
PFDN4-202ENST00000441080 CDC6Q99741 560 aa7.31□□□□□ -1.24
PFDN4-202ENST00000441080 ZNF281Q9Y2X9 895 aa7.31□□□□□ -1.24
PFDN4-202ENST00000441080 FGF10O15520 208 aaPredicted RBP7.3□□□□□ -1.24
PFDN4-202ENST00000441080 PRODHO43272 600 aa7.3□□□□□ -1.24
PFDN4-202ENST00000441080 CPP00450 1065 aa7.3□□□□□ -1.24
PFDN4-202ENST00000441080 ZGLP1P0C6A0 271 aa7.3□□□□□ -1.24
PFDN4-202ENST00000441080 FGFR1P11362 822 aa7.3□□□□□ -1.24
PFDN4-202ENST00000441080 HK2P52789 917 aa7.3□□□□□ -1.24
PFDN4-202ENST00000441080 GFRA1P56159 465 aa7.3□□□□□ -1.24
PFDN4-202ENST00000441080 SF1Q15637 639 aaKnown RBP7.3□□□□□ -1.24
PFDN4-202ENST00000441080 LONRF2Q1L5Z9 754 aa7.3□□□□□ -1.24
PFDN4-202ENST00000441080 ZNF792Q3KQV3 632 aa7.3□□□□□ -1.24
PFDN4-202ENST00000441080 YOD1Q5VVQ6 348 aaPredicted RBP7.3□□□□□ -1.24
PFDN4-202ENST00000441080 JAZF1Q86VZ6 243 aa7.3□□□□□ -1.24
PFDN4-202ENST00000441080 ABI1Q8IZP0 508 aa7.3□□□□□ -1.24
PFDN4-202ENST00000441080 JMYQ8N9B5 988 aa7.3□□□□□ -1.24
PFDN4-202ENST00000441080 COPS5Q92905 334 aa7.3□□□□□ -1.24
PFDN4-202ENST00000441080 MAP6Q96JE9 813 aa7.3□□□□□ -1.24
PFDN4-202ENST00000441080 IPO9Q96P70 1041 aaKnown RBP7.3□□□□□ -1.24
PFDN4-202ENST00000441080 MBNL3Q9NUK0 354 aaKnown RBP7.3□□□□□ -1.24
PFDN4-202ENST00000441080 ERVK13-1Q9NX77 482 aa7.3□□□□□ -1.24
PFDN4-202ENST00000441080 TMA7Q9Y2S6 64 aaKnown RBP7.3□□□□□ -1.24
PFDN4-202ENST00000441080 PTCH2Q9Y6C5 1203 aa7.3□□□□□ -1.24
PFDN4-202ENST00000441080 MRPL42Q9Y6G3 142 aaKnown RBP7.3□□□□□ -1.24
PFDN4-202ENST00000441080 SCG5P05408 212 aa7.29□□□□□ -1.24
PFDN4-202ENST00000441080 THBDP07204 575 aa7.29□□□□□ -1.24
PFDN4-202ENST00000441080 RNASE1P07998 156 aaKnown RBP7.29□□□□□ -1.24
PFDN4-202ENST00000441080 PABPC1P11940 636 aaKnown RBP7.29□□□□□ -1.24
PFDN4-202ENST00000441080 PRSS53Q2L4Q9 553 aa7.29□□□□□ -1.24
PFDN4-202ENST00000441080 CYP2R1Q6VVX0 501 aa7.29□□□□□ -1.24
PFDN4-202ENST00000441080 NSMFQ6X4W1 530 aa7.29□□□□□ -1.24
PFDN4-202ENST00000441080 TMEM145Q8NBT3 493 aa7.29□□□□□ -1.24
PFDN4-202ENST00000441080 ZSWIM2Q8NEG5 633 aa7.29□□□□□ -1.24
PFDN4-202ENST00000441080 KCTD13Q8WZ19 329 aa7.29□□□□□ -1.24
PFDN4-202ENST00000441080 RNPC3Q96LT9 517 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms