RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 PIP4K2BP78356 416 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 SPAG1Q07617 926 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 SLC10A5Q5PT55 438 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 DGKHQ86XP1 1220 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 PCMTD1Q96MG8 357 aaPredicted RBP15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 ANKRD2Q9GZV1 360 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 UBA5Q9GZZ9 404 aa15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 LUC7L2Q9Y383 392 aaKnown RBP15.23■□□□□ 0.03
HERPUD1-204ENST00000439977 PLCG1P19174 1290 aa15.22■□□□□ 0.03
HERPUD1-204ENST00000439977 NAPAP54920 295 aa15.22■□□□□ 0.03
HERPUD1-204ENST00000439977 JAKMIP3Q5VZ66 844 aa15.22■□□□□ 0.03
HERPUD1-204ENST00000439977 ABCB6Q9NP58 842 aa15.22■□□□□ 0.03
HERPUD1-204ENST00000439977 THRAP3Q9Y2W1 955 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-204ENST00000439977 H7C1D1 291 aa15.22■□□□□ 0.03
HERPUD1-204ENST00000439977 STXBP3O00186 592 aa15.22■□□□□ 0.03
HERPUD1-204ENST00000439977 KLRC4O43908 158 aa15.22■□□□□ 0.03
HERPUD1-204ENST00000439977 VSNL1P62760 191 aa15.22■□□□□ 0.03
HERPUD1-204ENST00000439977 STK4Q13043 487 aa15.22■□□□□ 0.03
HERPUD1-204ENST00000439977 CSGALNACT2Q8N6G5 542 aa15.22■□□□□ 0.03
HERPUD1-204ENST00000439977 CCDC51Q96ER9 411 aa15.22■□□□□ 0.03
HERPUD1-204ENST00000439977 CAPZA3Q96KX2 299 aa15.22■□□□□ 0.03
HERPUD1-204ENST00000439977 MKRN1Q9UHC7 482 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-204ENST00000439977 ZBTB22O15209 634 aa15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 N4BP1O75113 896 aaKnown RBP15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 CYP2C19P33261 490 aa15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 CEP112Q8N8E3 955 aa15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 OR8K1Q8NGG5 319 aa15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 PDE11AQ9HCR9 933 aa15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 BIN2Q9UBW5 565 aaPredicted RBP15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 NARFQ9UHQ1 456 aa15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 DUSP10Q9Y6W6 482 aa15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 COL14A1Q05707 1796 aaKnown RBP15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 M0R2N6 131 aa15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 PHACTR2O75167 634 aa15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 TRIM21P19474 475 aaKnown RBP15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 CYP27A1Q02318 531 aa15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 PDE4DQ08499 809 aa15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 GRM4Q14833 912 aa15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 NYXQ9GZU5 481 aa15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 BARHL2Q9NY43 387 aa15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.21■□□□□ 0.03
HERPUD1-204ENST00000439977 CCDC151A5D8V7 595 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 PSMA7O14818 248 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 EIF6P56537 245 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 ASIC1P78348 528 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 WDR59Q6PJI9 974 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 CABP7Q86V35 215 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 ARHGEF1Q92888 912 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 GDAP1L1Q96MZ0 367 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 MAGEC2Q9UBF1 373 aaPredicted RBP15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 PHLPP1O60346 1717 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 CTAGE15A4D2H0 777 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 SMCO2A6NFE2 343 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 CTAGE8P0CG41 777 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 RASA1P20936 1047 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 CTAGE6Q86UF2 777 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 CTAGE4Q8IX94 777 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 TUBGCP2Q9BSJ2 902 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 TMEM260Q9NX78 707 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 MYO6Q9UM54 1294 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 LGALS16A8MUM7 142 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 ZMYND10O75800 440 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 TXKP42681 527 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 TSR1Q2NL82 804 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 BEND6Q5SZJ8 279 aaPredicted RBP15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 CCDC122Q5T0U0 273 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 SPTY2D1Q68D10 685 aaPredicted RBP15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 ANKRD40Q6AI12 368 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 PYM1Q9BRP8 204 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 SLC39A2Q9NP94 309 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 TCP11L1Q9NUJ3 509 aa15.2■□□□□ 0.02
HERPUD1-204ENST00000439977 RCCD1A6NED2 376 aa15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 ATP1A1P05023 1023 aaKnown RBP15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 HNRNPH2P55795 449 aaKnown RBP15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 TBC1D8BQ0IIM8 1120 aa15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 TTI2Q6NXR4 508 aa15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 CLEC10AQ8IUN9 316 aa15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 AMOTL1Q8IY63 956 aa15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 DUSP9Q99956 384 aaKnown RBP15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 KBTBD4Q9NVX7 518 aa15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 COL16A1Q07092 1604 aaPredicted RBP15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 FRMPD2Q68DX3 1309 aaPredicted RBP15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 HERVK_113P62684 666 aa15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 STIM1Q13586 685 aa15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 GIMAP8Q8ND71 665 aaPredicted RBP15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 ZNF507Q8TCN5 953 aa15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 PIGSQ96S52 555 aa15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 EYA3Q99504 573 aa15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 UBXN6Q9BZV1 441 aa15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 LACRTQ9GZZ8 138 aa15.19■□□□□ 0.02
HERPUD1-204ENST00000439977 MACROD2A1Z1Q3 448 aa15.18■□□□□ 0.02
HERPUD1-204ENST00000439977 BAG3O95817 575 aa15.18■□□□□ 0.02
HERPUD1-204ENST00000439977 FECHP22830 423 aa15.18■□□□□ 0.02
HERPUD1-204ENST00000439977 DYMQ7RTS9 669 aa15.18■□□□□ 0.02
HERPUD1-204ENST00000439977 KIAA1328Q86T90 577 aa15.18■□□□□ 0.02
HERPUD1-204ENST00000439977 GJA10Q969M2 543 aa15.18■□□□□ 0.02
HERPUD1-204ENST00000439977 C8orf37Q96NL8 207 aa15.18■□□□□ 0.02
HERPUD1-204ENST00000439977 PALM3A6NDB9 673 aaPredicted RBP15.18■□□□□ 0.02
HERPUD1-204ENST00000439977 BTDP43251 543 aa15.18■□□□□ 0.02
HERPUD1-204ENST00000439977 MTIF2P46199 727 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms