RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 FMNL1O95466 1100 aaPredicted RBP21.3■■□□□ 1
HDAC6-208ENST00000438518 ICAM1P05362 532 aa21.3■■□□□ 1
HDAC6-208ENST00000438518 ANP32AP39687 249 aaKnown RBP21.3■■□□□ 1
HDAC6-208ENST00000438518 SSRP1Q08945 709 aaKnown RBP21.3■■□□□ 1
HDAC6-208ENST00000438518 FAM177A1Q8N128 213 aaPredicted RBP21.3■■□□□ 1
HDAC6-208ENST00000438518 REPS2Q8NFH8 660 aa21.3■■□□□ 1
HDAC6-208ENST00000438518 INTS4Q96HW7 963 aaKnown RBP21.3■■□□□ 1
HDAC6-208ENST00000438518 BEGAINQ9BUH8 593 aa21.3■■□□□ 1
HDAC6-208ENST00000438518 TEX13BQ9BXU2 312 aa21.3■■□□□ 1
HDAC6-208ENST00000438518 DEXIO95424 95 aa21.29■■□□□ 1
HDAC6-208ENST00000438518 CCNA1P78396 465 aa21.29■■□□□ 1
HDAC6-208ENST00000438518 CRHR2Q13324 411 aa21.29■■□□□ 1
HDAC6-208ENST00000438518 WASF1Q92558 559 aa21.29■■□□□ 1
HDAC6-208ENST00000438518 AMNQ9BXJ7 453 aa21.29■■□□□ 1
HDAC6-208ENST00000438518 CPVLQ9H3G5 476 aa21.29■■□□□ 1
HDAC6-208ENST00000438518 VAT1LQ9HCJ6 419 aa21.29■■□□□ 1
HDAC6-208ENST00000438518 ZNF214Q9UL59 606 aaPredicted RBP21.29■■□□□ 1
HDAC6-208ENST00000438518 KIF3AQ9Y496 699 aa21.29■■□□□ 1
HDAC6-208ENST00000438518 SLC25A27O95847 323 aa21.28■■□□□ 1
HDAC6-208ENST00000438518 ST3GAL1Q11201 340 aa21.28■■□□□ 1
HDAC6-208ENST00000438518 SLC35G1Q2M3R5 365 aa21.28■■□□□ 1
HDAC6-208ENST00000438518 QRICH1Q2TAL8 776 aa21.28■■□□□ 1
HDAC6-208ENST00000438518 TKFCQ3LXA3 575 aa21.28■■□□□ 1
HDAC6-208ENST00000438518 NOM1Q5C9Z4 860 aaKnown RBP21.28■■□□□ 1
HDAC6-208ENST00000438518 SAMD1Q6SPF0 538 aaPredicted RBP21.28■■□□□ 1
HDAC6-208ENST00000438518 HOMER1Q86YM7 354 aa21.28■■□□□ 1
HDAC6-208ENST00000438518 CMTR1Q8N1G2 835 aaKnown RBP21.28■■□□□ 1
HDAC6-208ENST00000438518 CCDC82Q8N4S0 544 aa21.28■■□□□ 1
HDAC6-208ENST00000438518 NSUN7Q8NE18 718 aaKnown RBP21.28■■□□□ 1
HDAC6-208ENST00000438518 GPRC5AQ8NFJ5 357 aa21.28■■□□□ 1
HDAC6-208ENST00000438518 SMARCC2Q8TAQ2 1214 aa21.28■■□□□ 1
HDAC6-208ENST00000438518 PIGSQ96S52 555 aa21.28■■□□□ 1
HDAC6-208ENST00000438518 SLC26A6Q9BXS9 759 aa21.28■■□□□ 1
HDAC6-208ENST00000438518 MAF1Q9H063 256 aa21.28■■□□□ 1
HDAC6-208ENST00000438518 RNF186Q9NXI6 227 aa21.28■■□□□ 1
HDAC6-208ENST00000438518 RBBP6Q7Z6E9 1792 aaKnown RBP21.28■■□□□ 1
HDAC6-208ENST00000438518 PTPDC1A2A3K4 754 aa21.27■■□□□ 1
HDAC6-208ENST00000438518 CTDNEP1O95476 244 aa21.27■■□□□ 1
HDAC6-208ENST00000438518 BCRP11274 1271 aa21.27■■□□□ 1
HDAC6-208ENST00000438518 ERVK-9P63128 1117 aa21.27■■□□□ 1
HDAC6-208ENST00000438518 ERVK-24P63145 666 aa21.27■■□□□ 1
HDAC6-208ENST00000438518 TMEM132BQ14DG7 1078 aa21.27■■□□□ 1
HDAC6-208ENST00000438518 PFKFB3Q16875 520 aaPredicted RBP21.27■■□□□ 1
HDAC6-208ENST00000438518 C17orf99Q6UX52 265 aa21.27■■□□□ 1
HDAC6-208ENST00000438518 FBXO11Q86XK2 927 aa21.27■■□□□ 1
HDAC6-208ENST00000438518 TEX2Q8IWB9 1127 aa21.27■■□□□ 1
HDAC6-208ENST00000438518 SHCBP1Q8NEM2 672 aa21.27■■□□□ 1
HDAC6-208ENST00000438518 SPATC1LQ9H0A9 340 aa21.27■■□□□ 1
HDAC6-208ENST00000438518 RBPJLQ9UBG7 517 aa21.27■■□□□ 1
HDAC6-208ENST00000438518 V9GY48 417 aaPredicted RBP21.27■■□□□ 1
HDAC6-208ENST00000438518 ZNF536O15090 1300 aa21.27■□□□□ 0.99
HDAC6-208ENST00000438518 ABCB11O95342 1321 aa21.27■□□□□ 0.99
HDAC6-208ENST00000438518 SCG2P13521 617 aa21.26■□□□□ 0.99
HDAC6-208ENST00000438518 STAT3P40763 770 aa21.26■□□□□ 0.99
HDAC6-208ENST00000438518 PPP1R18Q6NYC8 613 aa21.26■□□□□ 0.99
HDAC6-208ENST00000438518 RIOX2Q8IUF8 465 aa21.26■□□□□ 0.99
HDAC6-208ENST00000438518 JMYQ8N9B5 988 aa21.26■□□□□ 0.99
HDAC6-208ENST00000438518 CCDC12Q8WUD4 166 aaPredicted RBP21.26■□□□□ 0.99
HDAC6-208ENST00000438518 PHKBQ93100 1093 aa21.26■□□□□ 0.99
HDAC6-208ENST00000438518 PAGR1Q9BTK6 254 aa21.26■□□□□ 0.99
HDAC6-208ENST00000438518 BTBD7Q9P203 1132 aa21.26■□□□□ 0.99
HDAC6-208ENST00000438518 CNMDO75829 334 aa21.25■□□□□ 0.99
HDAC6-208ENST00000438518 XBP1P17861 261 aa21.25■□□□□ 0.99
HDAC6-208ENST00000438518 SNRNP48Q6IEG0 339 aaKnown RBP21.25■□□□□ 0.99
HDAC6-208ENST00000438518 CCDC174Q6PII3 467 aa21.25■□□□□ 0.99
HDAC6-208ENST00000438518 ANKRD13CQ8N6S4 541 aa21.25■□□□□ 0.99
HDAC6-208ENST00000438518 TSHZ2Q9NRE2 1034 aa21.25■□□□□ 0.99
HDAC6-208ENST00000438518 ORC3Q9UBD5 711 aaPredicted RBP21.25■□□□□ 0.99
HDAC6-208ENST00000438518 FBXO40Q9UH90 709 aa21.25■□□□□ 0.99
HDAC6-208ENST00000438518 CCPG1Q9ULG6 757 aa21.25■□□□□ 0.99
HDAC6-208ENST00000438518 TRPA1O75762 1119 aa21.24■□□□□ 0.99
HDAC6-208ENST00000438518 POTEEQ6S8J3 1075 aa21.24■□□□□ 0.99
HDAC6-208ENST00000438518 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.24■□□□□ 0.99
HDAC6-208ENST00000438518 CPXCR1Q8N123 301 aa21.24■□□□□ 0.99
HDAC6-208ENST00000438518 SAMD3Q8N6K7 520 aa21.24■□□□□ 0.99
HDAC6-208ENST00000438518 CHST13Q8NET6 341 aa21.24■□□□□ 0.99
HDAC6-208ENST00000438518 MROH8Q9H579 483 aa21.24■□□□□ 0.99
HDAC6-208ENST00000438518 RAVER2Q9HCJ3 691 aaKnown RBP21.24■□□□□ 0.99
HDAC6-208ENST00000438518 TXNRD2Q9NNW7 524 aa21.24■□□□□ 0.99
HDAC6-208ENST00000438518 SH3GLB2Q9NR46 395 aa21.24■□□□□ 0.99
HDAC6-208ENST00000438518 WBP1LQ9NX94 342 aa21.24■□□□□ 0.99
HDAC6-208ENST00000438518 MRPL11Q9Y3B7 192 aaKnown RBP21.24■□□□□ 0.99
HDAC6-208ENST00000438518 BAZ2BQ9UIF8 2168 aaKnown RBP21.24■□□□□ 0.99
HDAC6-208ENST00000438518 HSP90AA1P07900 732 aaKnown RBP21.23■□□□□ 0.99
HDAC6-208ENST00000438518 PLS1Q14651 629 aa21.23■□□□□ 0.99
HDAC6-208ENST00000438518 FAM184AQ8NB25 1140 aa21.23■□□□□ 0.99
HDAC6-208ENST00000438518 RGS22Q8NE09 1264 aa21.23■□□□□ 0.99
HDAC6-208ENST00000438518 CCDC148Q8NFR7 591 aa21.23■□□□□ 0.99
HDAC6-208ENST00000438518 BARHL2Q9NY43 387 aa21.23■□□□□ 0.99
HDAC6-208ENST00000438518 CPA4Q9UI42 421 aa21.23■□□□□ 0.99
HDAC6-208ENST00000438518 SMC3Q9UQE7 1217 aa21.23■□□□□ 0.99
HDAC6-208ENST00000438518 PCDHA1Q9Y5I3 950 aa21.23■□□□□ 0.99
HDAC6-208ENST00000438518 MAPK4P31152 587 aa21.22■□□□□ 0.99
HDAC6-208ENST00000438518 PKN1Q16512 942 aa21.22■□□□□ 0.99
HDAC6-208ENST00000438518 CCAR1Q8IX12 1150 aaKnown RBP21.22■□□□□ 0.99
HDAC6-208ENST00000438518 AGBL1Q96MI9 1066 aa21.22■□□□□ 0.99
HDAC6-208ENST00000438518 MOV10L1Q9BXT6 1211 aaKnown RBP21.22■□□□□ 0.99
HDAC6-208ENST00000438518 GLT8D2Q9H1C3 349 aa21.22■□□□□ 0.99
HDAC6-208ENST00000438518 MGAMO43451 1857 aa21.22■□□□□ 0.99
HDAC6-208ENST00000438518 ZNF236Q9UL36 1845 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms