RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 NYAP2Q9P242 653 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 ZNF236Q9UL36 1845 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 ROBO3Q96MS0 1386 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 GSG1L2A8MUP6 293 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 F5H6K3 240 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 SMIM22K7EJ46 135 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 NDUFB10O96000 172 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 TSPY3P0CV98 308 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 TSPY8P0CW00 308 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 KLRC3Q07444 240 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 Q7L0L9 218 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 CPXCR1Q8N123 301 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 PRPF38AQ8NAV1 312 aaKnown RBP9.23□□□□□ -0.93
VPS50-203ENST00000436177 KIFC2Q96AC6 838 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 NAPBQ9H115 298 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 DCTPP1Q9H773 170 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 SPC25Q9HBM1 224 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 CLIP2Q9UDT6 1046 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 FBXO40Q9UH90 709 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 ZHX1Q9UKY1 873 aaPredicted RBP9.23□□□□□ -0.93
VPS50-203ENST00000436177 ZNF214Q9UL59 606 aaPredicted RBP9.23□□□□□ -0.93
VPS50-203ENST00000436177 VPS9D1Q9Y2B5 631 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 STXBP5LQ9Y2K9 1186 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 DIS3Q9Y2L1 958 aaKnown RBP9.23□□□□□ -0.93
VPS50-203ENST00000436177 A0A0C4DFX4 3053 aa9.23□□□□□ -0.93
VPS50-203ENST00000436177 PRDM1O75626 825 aa9.22□□□□□ -0.93
VPS50-203ENST00000436177 TTLL1O95922 423 aa9.22□□□□□ -0.93
VPS50-203ENST00000436177 PGK1P00558 417 aa9.22□□□□□ -0.93
VPS50-203ENST00000436177 ZNF697Q5TEC3 545 aa9.22□□□□□ -0.93
VPS50-203ENST00000436177 SLC39A5Q6ZMH5 540 aa9.22□□□□□ -0.93
VPS50-203ENST00000436177 LRRC47Q8N1G4 583 aaKnown RBP9.22□□□□□ -0.93
VPS50-203ENST00000436177 ANKRD35Q8N283 1001 aa9.22□□□□□ -0.93
VPS50-203ENST00000436177 MSL3Q8N5Y2 521 aaKnown RBP9.22□□□□□ -0.93
VPS50-203ENST00000436177 NUP133Q8WUM0 1156 aa9.22□□□□□ -0.93
VPS50-203ENST00000436177 OSBP2Q969R2 916 aa9.22□□□□□ -0.93
VPS50-203ENST00000436177 FEM1BQ9UK73 627 aa9.22□□□□□ -0.93
VPS50-203ENST00000436177 FAM184BQ9ULE4 1060 aa9.22□□□□□ -0.93
VPS50-203ENST00000436177 SYNPO2Q9UMS6 1093 aa9.22□□□□□ -0.93
VPS50-203ENST00000436177 ADAMTS5Q9UNA0 930 aa9.22□□□□□ -0.93
VPS50-203ENST00000436177 TTC41PQ6P2S7 1318 aa9.22□□□□□ -0.93
VPS50-203ENST00000436177 A0A0G2JMZ2 1700 aa9.22□□□□□ -0.93
VPS50-203ENST00000436177 ALPK3Q96L96 1907 aa9.21□□□□□ -0.93
VPS50-203ENST00000436177 DCDC2CA8MYV0 355 aa9.21□□□□□ -0.94
VPS50-203ENST00000436177 M0R2C6 588 aa9.21□□□□□ -0.94
VPS50-203ENST00000436177 PQBP1O60828 265 aaKnown RBP9.21□□□□□ -0.94
VPS50-203ENST00000436177 IGHA2P01877 340 aa9.21□□□□□ -0.94
VPS50-203ENST00000436177 RAG1P15918 1043 aa9.21□□□□□ -0.94
VPS50-203ENST00000436177 TLE2Q04725 743 aa9.21□□□□□ -0.94
VPS50-203ENST00000436177 ZNF792Q3KQV3 632 aa9.21□□□□□ -0.94
VPS50-203ENST00000436177 VTI1AQ96AJ9 217 aa9.21□□□□□ -0.94
VPS50-203ENST00000436177 CEP95Q96GE4 821 aa9.21□□□□□ -0.94
VPS50-203ENST00000436177 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.21□□□□□ -0.94
VPS50-203ENST00000436177 EPB41L4AQ9HCS5 686 aaPredicted RBP9.21□□□□□ -0.94
VPS50-203ENST00000436177 PDLIM7Q9NR12 457 aa9.21□□□□□ -0.94
VPS50-203ENST00000436177 HOMER2Q9NSB8 354 aa9.21□□□□□ -0.94
VPS50-203ENST00000436177 MTMR10Q9NXD2 777 aa9.21□□□□□ -0.94
VPS50-203ENST00000436177 MTMR4Q9NYA4 1195 aa9.21□□□□□ -0.94
VPS50-203ENST00000436177 PHF24Q9UPV7 400 aa9.21□□□□□ -0.94
VPS50-203ENST00000436177 TACC3Q9Y6A5 838 aa9.21□□□□□ -0.94
VPS50-203ENST00000436177 SYNGAP1Q96PV0 1343 aa9.21□□□□□ -0.94
VPS50-203ENST00000436177 A0A1W2PQ45 241 aaPredicted RBP9.2□□□□□ -0.94
VPS50-203ENST00000436177 A0A1W2PQY0 241 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 PATL2C9JE40 543 aaKnown RBP9.2□□□□□ -0.94
VPS50-203ENST00000436177 DLL1O00548 723 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 CLTBP09497 229 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 FDX1P10109 184 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 TAL1P17542 331 aaPredicted RBP9.2□□□□□ -0.94
VPS50-203ENST00000436177 MX1P20591 662 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 SLC1A4P43007 532 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 STAT2P52630 851 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 OAZ1P54368 228 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 PPARAQ07869 468 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 SLFN13Q68D06 897 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 FAM109BQ6ICB4 259 aaPredicted RBP9.2□□□□□ -0.94
VPS50-203ENST00000436177 CCDC174Q6PII3 467 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 NOL8Q76FK4 1167 aaKnown RBP9.2□□□□□ -0.94
VPS50-203ENST00000436177 FAM160B2Q86V87 743 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 IFNL3Q8IZI9 196 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 GMCL1P1Q8NEA9 526 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 CHST13Q8NET6 341 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 CHURC1Q8WUH1 139 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 BADQ92934 168 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 LENG1Q96BZ8 264 aaPredicted RBP9.2□□□□□ -0.94
VPS50-203ENST00000436177 RNPC3Q96LT9 517 aaKnown RBP9.2□□□□□ -0.94
VPS50-203ENST00000436177 FAM161BQ96MY7 647 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 RAVER2Q9HCJ3 691 aaKnown RBP9.2□□□□□ -0.94
VPS50-203ENST00000436177 STARD7Q9NQZ5 370 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 TOMM22Q9NS69 142 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 RYDENQ9NUL5 291 aaKnown RBP9.2□□□□□ -0.94
VPS50-203ENST00000436177 TMEM39AQ9NV64 488 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 STX8Q9UNK0 236 aa9.2□□□□□ -0.94
VPS50-203ENST00000436177 MYH8P13535 1937 aa9.19□□□□□ -0.94
VPS50-203ENST00000436177 BAZ2AQ9UIF9 1905 aaKnown RBP9.19□□□□□ -0.94
VPS50-203ENST00000436177 MOXD2PA6NHM9 499 aa9.19□□□□□ -0.94
VPS50-203ENST00000436177 TSPY2A6NKD2 308 aa9.19□□□□□ -0.94
VPS50-203ENST00000436177 TMEM232C9JQI7 657 aa9.19□□□□□ -0.94
VPS50-203ENST00000436177 ATP2A1O14983 1001 aa9.19□□□□□ -0.94
VPS50-203ENST00000436177 C6orf222P0C671 652 aaPredicted RBP9.19□□□□□ -0.94
VPS50-203ENST00000436177 BMP3P12645 472 aa9.19□□□□□ -0.94
VPS50-203ENST00000436177 ACLYP53396 1101 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms