RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 CDK8P49336 464 aa18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 ERVK-24P63145 666 aa18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 GPSM2P81274 684 aa18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 LRRC15Q8TF66 581 aa18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 FAM163AQ96GL9 167 aaPredicted RBP18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 IRX2Q9BZI1 471 aaPredicted RBP18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 VPS16Q9H269 839 aa18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 CUEDC2Q9H467 287 aa18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 MAGEF1Q9HAY2 307 aa18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 CD209Q9NNX6 404 aa18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 A0A0U1RQJ8 604 aa18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 PNMA6AP0CW24 399 aaPredicted RBP18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 BTDP43251 543 aa18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 KRT25Q7Z3Z0 450 aa18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 GIMAP8Q8ND71 665 aaPredicted RBP18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 CCDC12Q8WUD4 166 aaPredicted RBP18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 ATRIPQ8WXE1 791 aa18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 RABGGTAQ92696 567 aa18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 AK8Q96MA6 479 aa18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 SAP30BPQ9UHR5 308 aaKnown RBP18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 STX8Q9UNK0 236 aa18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 TTF2Q9UNY4 1162 aaKnown RBP18.11■□□□□ 0.49
HLA-DQB2-231ENST00000435145 TOM1O60784 492 aa18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 PARP1P09874 1014 aaKnown RBP18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 UBA7P41226 1012 aa18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 PRR5LQ6MZQ0 368 aa18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 GPR101Q96P66 508 aaPredicted RBP18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 EYA3Q99504 573 aa18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 THAP9Q9H5L6 903 aa18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 LGALS16A8MUM7 142 aa18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 ATP8B1O43520 1251 aa18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 KIF5CO60282 957 aa18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 PLCG2P16885 1265 aa18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 ATP2B4P23634 1241 aa18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 EEF1GP26641 437 aaKnown RBP18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 RHBDL3P58872 404 aa18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 PIP4K2BP78356 416 aa18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 TMCO3Q6UWJ1 677 aa18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 LZTFL1Q9NQ48 299 aa18.1■□□□□ 0.49
HLA-DQB2-231ENST00000435145 GAKO14976 1311 aa18.09■□□□□ 0.49
HLA-DQB2-231ENST00000435145 A0A1W2PQC6 194 aa18.09■□□□□ 0.49
HLA-DQB2-231ENST00000435145 ADRA2BP18089 450 aa18.09■□□□□ 0.49
HLA-DQB2-231ENST00000435145 PMS1P54277 932 aaKnown RBP18.09■□□□□ 0.49
HLA-DQB2-231ENST00000435145 TUBB2AQ13885 445 aa18.09■□□□□ 0.49
HLA-DQB2-231ENST00000435145 TTI2Q6NXR4 508 aa18.09■□□□□ 0.49
HLA-DQB2-231ENST00000435145 CYP26C1Q6V0L0 522 aa18.09■□□□□ 0.49
HLA-DQB2-231ENST00000435145 ZNF507Q8TCN5 953 aa18.09■□□□□ 0.49
HLA-DQB2-231ENST00000435145 TUBB2BQ9BVA1 445 aa18.09■□□□□ 0.49
HLA-DQB2-231ENST00000435145 OR52Z1P0C646 297 aa18.08■□□□□ 0.49
HLA-DQB2-231ENST00000435145 GOLGA8HP0CJ92 632 aa18.08■□□□□ 0.49
HLA-DQB2-231ENST00000435145 ARHGAP25P42331 645 aa18.08■□□□□ 0.49
HLA-DQB2-231ENST00000435145 ORC2Q13416 577 aaPredicted RBP18.08■□□□□ 0.49
HLA-DQB2-231ENST00000435145 FAM196AQ6ZSG2 479 aa18.08■□□□□ 0.49
HLA-DQB2-231ENST00000435145 NOC3LQ8WTT2 800 aaKnown RBP18.08■□□□□ 0.49
HLA-DQB2-231ENST00000435145 MAPK8IP1Q9UQF2 711 aa18.08■□□□□ 0.49
HLA-DQB2-231ENST00000435145 ESYT2A0FGR8 921 aa18.08■□□□□ 0.48
HLA-DQB2-231ENST00000435145 TRIM49BA6NDI0 452 aa18.08■□□□□ 0.48
HLA-DQB2-231ENST00000435145 UFL1O94874 794 aa18.08■□□□□ 0.48
HLA-DQB2-231ENST00000435145 KIF20AO95235 890 aa18.08■□□□□ 0.48
HLA-DQB2-231ENST00000435145 NAPAP54920 295 aa18.08■□□□□ 0.48
HLA-DQB2-231ENST00000435145 NONOQ15233 471 aaKnown RBP eCLIP18.08■□□□□ 0.48
HLA-DQB2-231ENST00000435145 TEX11Q8IYF3 940 aa18.08■□□□□ 0.48
HLA-DQB2-231ENST00000435145 MB21D1Q8N884 522 aa18.08■□□□□ 0.48
HLA-DQB2-231ENST00000435145 GOLGA1Q92805 767 aa18.08■□□□□ 0.48
HLA-DQB2-231ENST00000435145 DHTKD1Q96HY7 919 aaPredicted RBP18.08■□□□□ 0.48
HLA-DQB2-231ENST00000435145 CDC23Q9UJX2 597 aa18.08■□□□□ 0.48
HLA-DQB2-231ENST00000435145 PSMA7O14818 248 aa18.07■□□□□ 0.48
HLA-DQB2-231ENST00000435145 PLCG1P19174 1290 aa18.07■□□□□ 0.48
HLA-DQB2-231ENST00000435145 GNA11P29992 359 aa18.07■□□□□ 0.48
HLA-DQB2-231ENST00000435145 PLA2G4AP47712 749 aa18.07■□□□□ 0.48
HLA-DQB2-231ENST00000435145 UBXN1Q04323 297 aa18.07■□□□□ 0.48
HLA-DQB2-231ENST00000435145 TERF2Q15554 542 aa18.07■□□□□ 0.48
HLA-DQB2-231ENST00000435145 ACRBPQ8NEB7 543 aa18.07■□□□□ 0.48
HLA-DQB2-231ENST00000435145 RPGRQ92834 1020 aaKnown RBP18.07■□□□□ 0.48
HLA-DQB2-231ENST00000435145 NUP88Q99567 741 aaPredicted RBP18.07■□□□□ 0.48
HLA-DQB2-231ENST00000435145 C6orf50Q9HD87 102 aa18.07■□□□□ 0.48
HLA-DQB2-231ENST00000435145 PODXL2Q9NZ53 605 aa18.07■□□□□ 0.48
HLA-DQB2-231ENST00000435145 MYO1AQ9UBC5 1043 aa18.07■□□□□ 0.48
HLA-DQB2-231ENST00000435145 PLIN4Q96Q06 1357 aa18.07■□□□□ 0.48
HLA-DQB2-231ENST00000435145 KRT9P35527 623 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 FAM193AP78312 1265 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 STIM1Q13586 685 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 TXNRD1Q16881 649 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 FAM182BQ5T319 152 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 SRGAP1Q7Z6B7 1085 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 CABP7Q86V35 215 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 RRP36Q96EU6 259 aaKnown RBP18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 DNAJC7Q99615 494 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 C7orf25Q9BPX7 421 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 CPVLQ9H3G5 476 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 GGA1Q9UJY5 639 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 SMCO2A6NFE2 343 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 COBLL1Q53SF7 1204 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 ZNF569Q5MCW4 686 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 TEX35Q5T0J7 233 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 CC2D1AQ6P1N0 951 aaPredicted RBP18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 USP17L2Q6R6M4 530 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 NEK8Q86SG6 692 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 RASSF8Q8NHQ8 419 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 CEP95Q96GE4 821 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms