RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 QRICH1Q2TAL8 776 aa26.82■■□□□ 1.88
SMARCAL1-208ENST00000434435 PTPN18Q99952 460 aa26.82■■□□□ 1.88
SMARCAL1-208ENST00000434435 ALG1Q9BT22 464 aa26.82■■□□□ 1.88
SMARCAL1-208ENST00000434435 CWC22Q9HCG8 908 aaKnown RBP26.82■■□□□ 1.88
SMARCAL1-208ENST00000434435 SNAP25P60880 206 aa26.81■■□□□ 1.88
SMARCAL1-208ENST00000434435 FAM43AQ8N2R8 423 aa26.81■■□□□ 1.88
SMARCAL1-208ENST00000434435 SLC38A10Q9HBR0 1119 aa26.81■■□□□ 1.88
SMARCAL1-208ENST00000434435 hCG_1984214I3L0E3 225 aa26.8■■□□□ 1.88
SMARCAL1-208ENST00000434435 VWA5AO00534 786 aa26.8■■□□□ 1.88
SMARCAL1-208ENST00000434435 C1QTNF8P60827 252 aa26.8■■□□□ 1.88
SMARCAL1-208ENST00000434435 HERVK_113P62684 666 aa26.8■■□□□ 1.88
SMARCAL1-208ENST00000434435 KIF23Q02241 960 aaPredicted RBP26.8■■□□□ 1.88
SMARCAL1-208ENST00000434435 OTUD7BQ6GQQ9 843 aa26.8■■□□□ 1.88
SMARCAL1-208ENST00000434435 LBX2Q6XYB7 198 aa26.8■■□□□ 1.88
SMARCAL1-208ENST00000434435 ZNF713Q8N859 430 aaPredicted RBP26.8■■□□□ 1.88
SMARCAL1-208ENST00000434435 GTF3C2Q8WUA4 911 aaPredicted RBP26.8■■□□□ 1.88
SMARCAL1-208ENST00000434435 PARK7Q99497 189 aaKnown RBP26.8■■□□□ 1.88
SMARCAL1-208ENST00000434435 P2RX7Q99572 595 aaKnown RBP26.8■■□□□ 1.88
SMARCAL1-208ENST00000434435 ADAMTS5Q9UNA0 930 aa26.8■■□□□ 1.88
SMARCAL1-208ENST00000434435 IGF2BP3O00425 579 aaKnown RBP eCLIP26.79■■□□□ 1.88
SMARCAL1-208ENST00000434435 PDCP20941 246 aa26.79■■□□□ 1.88
SMARCAL1-208ENST00000434435 HTRA3P83110 453 aa26.79■■□□□ 1.88
SMARCAL1-208ENST00000434435 TRAF1Q13077 416 aa26.79■■□□□ 1.88
SMARCAL1-208ENST00000434435 CCDC174Q6PII3 467 aa26.79■■□□□ 1.88
SMARCAL1-208ENST00000434435 HEATR3Q7Z4Q2 680 aa26.79■■□□□ 1.88
SMARCAL1-208ENST00000434435 FBXO11Q86XK2 927 aa26.79■■□□□ 1.88
SMARCAL1-208ENST00000434435 REM2Q8IYK8 340 aaPredicted RBP26.79■■□□□ 1.88
SMARCAL1-208ENST00000434435 MB21D1Q8N884 522 aa26.79■■□□□ 1.88
SMARCAL1-208ENST00000434435 AIFM3Q96NN9 605 aa26.79■■□□□ 1.88
SMARCAL1-208ENST00000434435 AMNQ9BXJ7 453 aa26.79■■□□□ 1.88
SMARCAL1-208ENST00000434435 AOC2O75106 756 aa26.78■■□□□ 1.88
SMARCAL1-208ENST00000434435 HSPA6P17066 643 aa26.78■■□□□ 1.88
SMARCAL1-208ENST00000434435 XBP1P17861 261 aa26.78■■□□□ 1.88
SMARCAL1-208ENST00000434435 TM4SF4P48230 202 aa26.78■■□□□ 1.88
SMARCAL1-208ENST00000434435 WWC2Q6AWC2 1192 aa26.78■■□□□ 1.88
SMARCAL1-208ENST00000434435 IFNL1Q8IU54 200 aa26.78■■□□□ 1.88
SMARCAL1-208ENST00000434435 GPKOWQ92917 476 aaPredicted RBP eCLIP26.78■■□□□ 1.88
SMARCAL1-208ENST00000434435 PNMA2Q9UL42 364 aa26.78■■□□□ 1.88
SMARCAL1-208ENST00000434435 WDR33Q9C0J8 1336 aaKnown RBP26.78■■□□□ 1.88
SMARCAL1-208ENST00000434435 PPP1R11O60927 126 aaPredicted RBP26.77■■□□□ 1.88
SMARCAL1-208ENST00000434435 ICAM1P05362 532 aa26.77■■□□□ 1.88
SMARCAL1-208ENST00000434435 FOSBP53539 338 aa26.77■■□□□ 1.88
SMARCAL1-208ENST00000434435 OAZ1P54368 228 aa26.77■■□□□ 1.88
SMARCAL1-208ENST00000434435 TRIM29Q14134 588 aa26.77■■□□□ 1.88
SMARCAL1-208ENST00000434435 REPS2Q8NFH8 660 aa26.77■■□□□ 1.88
SMARCAL1-208ENST00000434435 SMCR8Q8TEV9 937 aaPredicted RBP26.77■■□□□ 1.88
SMARCAL1-208ENST00000434435 C8orf76Q96K31 380 aa26.77■■□□□ 1.88
SMARCAL1-208ENST00000434435 ZIC5Q96T25 663 aa26.77■■□□□ 1.88
SMARCAL1-208ENST00000434435 BARHL2Q9NY43 387 aa26.77■■□□□ 1.88
SMARCAL1-208ENST00000434435 CYP2C8P10632 490 aa26.76■■□□□ 1.87
SMARCAL1-208ENST00000434435 LARP1BQ659C4 914 aaKnown RBP26.76■■□□□ 1.87
SMARCAL1-208ENST00000434435 CCDC148Q8NFR7 591 aa26.76■■□□□ 1.87
SMARCAL1-208ENST00000434435 SH3GLB2Q9NR46 395 aa26.76■■□□□ 1.87
SMARCAL1-208ENST00000434435 VPS54Q9P1Q0 977 aa26.76■■□□□ 1.87
SMARCAL1-208ENST00000434435 ZNF536O15090 1300 aa26.75■■□□□ 1.87
SMARCAL1-208ENST00000434435 STXBP3O00186 592 aa26.75■■□□□ 1.87
SMARCAL1-208ENST00000434435 VEGFBP49765 207 aa26.75■■□□□ 1.87
SMARCAL1-208ENST00000434435 NAPAP54920 295 aa26.75■■□□□ 1.87
SMARCAL1-208ENST00000434435 TAF1CQ15572 869 aaPredicted RBP26.75■■□□□ 1.87
SMARCAL1-208ENST00000434435 USH1GQ495M9 461 aa26.75■■□□□ 1.87
SMARCAL1-208ENST00000434435 PPP1R18Q6NYC8 613 aa26.75■■□□□ 1.87
SMARCAL1-208ENST00000434435 CPXCR1Q8N123 301 aa26.75■■□□□ 1.87
SMARCAL1-208ENST00000434435 FAM177A1Q8N128 213 aaPredicted RBP26.75■■□□□ 1.87
SMARCAL1-208ENST00000434435 CCDC12Q8WUD4 166 aaPredicted RBP26.75■■□□□ 1.87
SMARCAL1-208ENST00000434435 COA7Q96BR5 231 aa26.75■■□□□ 1.87
SMARCAL1-208ENST00000434435 RAVER2Q9HCJ3 691 aaKnown RBP26.75■■□□□ 1.87
SMARCAL1-208ENST00000434435 CCPG1Q9ULG6 757 aa26.75■■□□□ 1.87
SMARCAL1-208ENST00000434435 GCLCP48506 637 aaPredicted RBP26.74■■□□□ 1.87
SMARCAL1-208ENST00000434435 TMEM132BQ14DG7 1078 aa26.74■■□□□ 1.87
SMARCAL1-208ENST00000434435 PAGR1Q9BTK6 254 aa26.74■■□□□ 1.87
SMARCAL1-208ENST00000434435 ZNF214Q9UL59 606 aaPredicted RBP26.74■■□□□ 1.87
SMARCAL1-208ENST00000434435 PCDHA1Q9Y5I3 950 aa26.74■■□□□ 1.87
SMARCAL1-208ENST00000434435 ABCB11O95342 1321 aa26.73■■□□□ 1.87
SMARCAL1-208ENST00000434435 ATP2A1O14983 1001 aa26.73■■□□□ 1.87
SMARCAL1-208ENST00000434435 MAP2K2P36507 400 aa26.73■■□□□ 1.87
SMARCAL1-208ENST00000434435 PLS1Q14651 629 aa26.73■■□□□ 1.87
SMARCAL1-208ENST00000434435 TEX13BQ9BXU2 312 aa26.73■■□□□ 1.87
SMARCAL1-208ENST00000434435 RABGAP1Q9Y3P9 1069 aa26.73■■□□□ 1.87
SMARCAL1-208ENST00000434435 H3BQV1 296 aa26.72■■□□□ 1.87
SMARCAL1-208ENST00000434435 ALDH1A1P00352 501 aa26.72■■□□□ 1.87
SMARCAL1-208ENST00000434435 PDIA4P13667 645 aaKnown RBP26.72■■□□□ 1.87
SMARCAL1-208ENST00000434435 SYT1P21579 422 aa26.72■■□□□ 1.87
SMARCAL1-208ENST00000434435 IFFO2Q5TF58 517 aa26.72■■□□□ 1.87
SMARCAL1-208ENST00000434435 SNRNP48Q6IEG0 339 aaKnown RBP26.72■■□□□ 1.87
SMARCAL1-208ENST00000434435 RGS22Q8NE09 1264 aa26.72■■□□□ 1.87
SMARCAL1-208ENST00000434435 AGBL1Q96MI9 1066 aa26.72■■□□□ 1.87
SMARCAL1-208ENST00000434435 BTBD7Q9P203 1132 aa26.72■■□□□ 1.87
SMARCAL1-208ENST00000434435 MYH15Q9Y2K3 1946 aa26.72■■□□□ 1.87
SMARCAL1-208ENST00000434435 NLRP5P59047 1200 aa26.71■■□□□ 1.87
SMARCAL1-208ENST00000434435 GUCY1B3Q02153 619 aa26.71■■□□□ 1.87
SMARCAL1-208ENST00000434435 KRT40Q6A162 431 aa26.71■■□□□ 1.87
SMARCAL1-208ENST00000434435 TYW1BQ6NUM6 668 aa26.71■■□□□ 1.87
SMARCAL1-208ENST00000434435 FBXO18Q8NFZ0 1043 aa26.71■■□□□ 1.87
SMARCAL1-208ENST00000434435 GJB4Q9NTQ9 266 aa26.71■■□□□ 1.87
SMARCAL1-208ENST00000434435 MRPL11Q9Y3B7 192 aaKnown RBP26.71■■□□□ 1.87
SMARCAL1-208ENST00000434435 PLXNB2O15031 1838 aa26.7■■□□□ 1.87
SMARCAL1-208ENST00000434435 ESYT2A0FGR8 921 aa26.7■■□□□ 1.86
SMARCAL1-208ENST00000434435 CNMDO75829 334 aa26.7■■□□□ 1.86
SMARCAL1-208ENST00000434435 ALAS1P13196 640 aa26.7■■□□□ 1.86
SMARCAL1-208ENST00000434435 TAL1P17542 331 aaPredicted RBP26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms