RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 GRIA4P48058 902 aa12.74□□□□□ -0.37
LINC01090-202ENST00000434418 GMPSP49915 693 aaPredicted RBP12.74□□□□□ -0.37
LINC01090-202ENST00000434418 KIAA2012Q0VF49 1180 aa12.74□□□□□ -0.37
LINC01090-202ENST00000434418 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.74□□□□□ -0.37
LINC01090-202ENST00000434418 CCNJLQ8IV13 435 aa12.74□□□□□ -0.37
LINC01090-202ENST00000434418 ADAM19Q9H013 955 aa12.74□□□□□ -0.37
LINC01090-202ENST00000434418 GPRC5DQ9NZD1 345 aa12.74□□□□□ -0.37
LINC01090-202ENST00000434418 SOX13Q9UN79 622 aa12.74□□□□□ -0.37
LINC01090-202ENST00000434418 LINC01387J3KSC0 135 aa12.73□□□□□ -0.37
LINC01090-202ENST00000434418 TRAF5O00463 557 aa12.73□□□□□ -0.37
LINC01090-202ENST00000434418 DEAF1O75398 565 aaPredicted RBP12.73□□□□□ -0.37
LINC01090-202ENST00000434418 LDHBP07195 334 aaKnown RBP12.73□□□□□ -0.37
LINC01090-202ENST00000434418 MFAP1P55081 439 aaKnown RBP12.73□□□□□ -0.37
LINC01090-202ENST00000434418 GRM2Q14416 872 aa12.73□□□□□ -0.37
LINC01090-202ENST00000434418 SF3B3Q15393 1217 aaKnown RBP12.73□□□□□ -0.37
LINC01090-202ENST00000434418 SPRED3Q2MJR0 410 aa12.73□□□□□ -0.37
LINC01090-202ENST00000434418 FMR1NBQ8N0W7 255 aaPredicted RBP12.73□□□□□ -0.37
LINC01090-202ENST00000434418 GPR101Q96P66 508 aaPredicted RBP12.73□□□□□ -0.37
LINC01090-202ENST00000434418 MUC3BQ9H195 1237 aa12.73□□□□□ -0.37
LINC01090-202ENST00000434418 VPS33BQ9H267 617 aa12.73□□□□□ -0.37
LINC01090-202ENST00000434418 RNF19AQ9NV58 838 aa12.73□□□□□ -0.37
LINC01090-202ENST00000434418 ABT1Q9ULW3 272 aaKnown RBP12.73□□□□□ -0.37
LINC01090-202ENST00000434418 PPME1Q9Y570 386 aa12.73□□□□□ -0.37
LINC01090-202ENST00000434418 SHTN1A0MZ66 631 aa12.72□□□□□ -0.37
LINC01090-202ENST00000434418 SPDYE3A6NKU9 549 aa12.72□□□□□ -0.37
LINC01090-202ENST00000434418 YDJCA8MPS7 323 aa12.72□□□□□ -0.37
LINC01090-202ENST00000434418 GPSM2P81274 684 aa12.72□□□□□ -0.37
LINC01090-202ENST00000434418 TRIM28Q13263 835 aaKnown RBP12.72□□□□□ -0.37
LINC01090-202ENST00000434418 CIAPIN1Q6FI81 312 aa12.72□□□□□ -0.37
LINC01090-202ENST00000434418 TMC4Q7Z404 712 aa12.72□□□□□ -0.37
LINC01090-202ENST00000434418 ZBTB38Q8NAP3 1195 aaPredicted RBP12.72□□□□□ -0.37
LINC01090-202ENST00000434418 SEC31BQ9NQW1 1179 aa12.72□□□□□ -0.37
LINC01090-202ENST00000434418 GRIK4Q16099 956 aa12.71□□□□□ -0.37
LINC01090-202ENST00000434418 PRRT3Q5FWE3 981 aa12.71□□□□□ -0.37
LINC01090-202ENST00000434418 CCDC30Q5VVM6 783 aa12.71□□□□□ -0.37
LINC01090-202ENST00000434418 USP50Q70EL3 339 aaPredicted RBP12.71□□□□□ -0.37
LINC01090-202ENST00000434418 BCL2L13Q9BXK5 485 aa12.71□□□□□ -0.37
LINC01090-202ENST00000434418 DBNDD1Q9H9R9 158 aa12.71□□□□□ -0.37
LINC01090-202ENST00000434418 ADARB2Q9NS39 739 aaKnown RBP12.71□□□□□ -0.37
LINC01090-202ENST00000434418 TRPM7Q96QT4 1865 aa12.7□□□□□ -0.38
LINC01090-202ENST00000434418 KRBA1A5PL33 1030 aa12.7□□□□□ -0.38
LINC01090-202ENST00000434418 FOXN1O15353 648 aa12.7□□□□□ -0.38
LINC01090-202ENST00000434418 RAC1P63000 192 aa12.7□□□□□ -0.38
LINC01090-202ENST00000434418 ATP2B2Q01814 1243 aa12.7□□□□□ -0.38
LINC01090-202ENST00000434418 TAGLNQ01995 201 aaKnown RBP12.7□□□□□ -0.38
LINC01090-202ENST00000434418 TNIP1Q15025 636 aa12.7□□□□□ -0.38
LINC01090-202ENST00000434418 SETDB1Q15047 1291 aa12.7□□□□□ -0.38
LINC01090-202ENST00000434418 VN1R5Q7Z5H4 357 aa12.7□□□□□ -0.38
LINC01090-202ENST00000434418 GLIS3Q8NEA6 775 aa12.7□□□□□ -0.38
LINC01090-202ENST00000434418 BSNDQ8WZ55 320 aa12.7□□□□□ -0.38
LINC01090-202ENST00000434418 MRS2Q9HD23 443 aa12.7□□□□□ -0.38
LINC01090-202ENST00000434418 ABCB6Q9NP58 842 aa12.7□□□□□ -0.38
LINC01090-202ENST00000434418 CWC25Q9NXE8 425 aaPredicted RBP12.7□□□□□ -0.38
LINC01090-202ENST00000434418 POLLQ9UGP5 575 aa12.7□□□□□ -0.38
LINC01090-202ENST00000434418 MAP3K2Q9Y2U5 619 aa12.7□□□□□ -0.38
LINC01090-202ENST00000434418 SPEF2Q9C093 1822 aa12.69□□□□□ -0.38
LINC01090-202ENST00000434418 DDX58O95786 925 aaKnown RBP12.69□□□□□ -0.38
LINC01090-202ENST00000434418 PCCAP05165 728 aaPredicted RBP12.69□□□□□ -0.38
LINC01090-202ENST00000434418 SPATA31C1P0DKV0 1188 aa12.69□□□□□ -0.38
LINC01090-202ENST00000434418 RPS8P62241 208 aaKnown RBP12.69□□□□□ -0.38
LINC01090-202ENST00000434418 GRM1Q13255 1194 aa12.69□□□□□ -0.38
LINC01090-202ENST00000434418 DEFB115Q30KQ5 88 aa12.69□□□□□ -0.38
LINC01090-202ENST00000434418 HGSNATQ68CP4 663 aa12.69□□□□□ -0.38
LINC01090-202ENST00000434418 CACTIN-AS1Q8N1I8 211 aa12.69□□□□□ -0.38
LINC01090-202ENST00000434418 CCDC191Q8NCU4 936 aa12.69□□□□□ -0.38
LINC01090-202ENST00000434418 METTL22Q9BUU2 404 aaPredicted RBP12.69□□□□□ -0.38
LINC01090-202ENST00000434418 A0A096LPE4 126 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 A0A1W2PPZ6 126 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 PI4KAP2A4QPH2 592 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 RASSF10A6NK89 507 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 PSMD14O00487 310 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 ECE2O60344 883 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 TWISTNBQ3B726 338 aaPredicted RBP12.68□□□□□ -0.38
LINC01090-202ENST00000434418 CST9Q5W186 159 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 NXPE4Q6UWF7 544 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 SHISA2Q6UWI4 295 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 G2E3Q7L622 706 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 FBXO33Q7Z6M2 555 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 PI4KAP1Q8N8J0 262 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 GALNT11Q8NCW6 608 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 TBC1D16Q8TBP0 767 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 FBF1Q8TES7 1133 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 STK31Q9BXU1 1019 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 BCO2Q9BYV7 579 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 GLIS2Q9BZE0 524 aaPredicted RBP12.68□□□□□ -0.38
LINC01090-202ENST00000434418 KCNQ5Q9NR82 932 aa12.68□□□□□ -0.38
LINC01090-202ENST00000434418 CNOT7Q9UIV1 285 aaKnown RBP12.68□□□□□ -0.38
LINC01090-202ENST00000434418 CDHR2Q9BYE9 1310 aa12.67□□□□□ -0.38
LINC01090-202ENST00000434418 SCN9AQ15858 1988 aa12.67□□□□□ -0.38
LINC01090-202ENST00000434418 H3BRJ5 948 aa12.67□□□□□ -0.38
LINC01090-202ENST00000434418 PDE8AO60658 829 aa12.67□□□□□ -0.38
LINC01090-202ENST00000434418 UFL1O94874 794 aa12.67□□□□□ -0.38
LINC01090-202ENST00000434418 GDF11O95390 407 aa12.67□□□□□ -0.38
LINC01090-202ENST00000434418 IGKV5-2P06315 115 aa12.67□□□□□ -0.38
LINC01090-202ENST00000434418 COL19A1Q14993 1142 aa12.67□□□□□ -0.38
LINC01090-202ENST00000434418 CWF19L2Q2TBE0 894 aaKnown RBP12.67□□□□□ -0.38
LINC01090-202ENST00000434418 CCDC152Q4G0S7 254 aa12.67□□□□□ -0.38
LINC01090-202ENST00000434418 ALG1LQ6GMV1 187 aa12.67□□□□□ -0.38
LINC01090-202ENST00000434418 KSR2Q6VAB6 950 aa12.67□□□□□ -0.38
LINC01090-202ENST00000434418 DTWD1Q8N5C7 304 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms