RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 PREX2Q70Z35 1606 aa8.44□□□□□ -1.06
HDAC9-213ENST00000433709 LOC100996750A0A140TA64 210 aa8.44□□□□□ -1.06
HDAC9-213ENST00000433709 PRAMEF1O95521 474 aa8.44□□□□□ -1.06
HDAC9-213ENST00000433709 SLC7A5Q01650 507 aa8.44□□□□□ -1.06
HDAC9-213ENST00000433709 BBS9Q3SYG4 887 aa8.44□□□□□ -1.06
HDAC9-213ENST00000433709 KLHL6Q8WZ60 621 aa8.44□□□□□ -1.06
HDAC9-213ENST00000433709 KRTAP4-6Q9BYQ5 205 aa8.44□□□□□ -1.06
HDAC9-213ENST00000433709 MBNL3Q9NUK0 354 aaKnown RBP8.44□□□□□ -1.06
HDAC9-213ENST00000433709 GFOD1Q9NXC2 390 aa8.44□□□□□ -1.06
HDAC9-213ENST00000433709 LMCD1Q9NZU5 365 aa8.44□□□□□ -1.06
HDAC9-213ENST00000433709 DUSP13Q9UII6 198 aa8.44□□□□□ -1.06
HDAC9-213ENST00000433709 CEP162Q5TB80 1403 aa8.44□□□□□ -1.06
HDAC9-213ENST00000433709 YEATS2Q9ULM3 1422 aa8.44□□□□□ -1.06
HDAC9-213ENST00000433709 HECW2Q9P2P5 1572 aa8.44□□□□□ -1.06
HDAC9-213ENST00000433709 REREQ9P2R6 1566 aa8.44□□□□□ -1.06
HDAC9-213ENST00000433709 SIGLEC6O43699 453 aa8.43□□□□□ -1.06
HDAC9-213ENST00000433709 VHLLQ6RSH7 139 aa8.43□□□□□ -1.06
HDAC9-213ENST00000433709 ENOX1Q8TC92 643 aaKnown RBP8.43□□□□□ -1.06
HDAC9-213ENST00000433709 PI4K2BQ8TCG2 481 aa8.43□□□□□ -1.06
HDAC9-213ENST00000433709 SYTL5Q8TDW5 730 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-213ENST00000433709 SMARCC1Q92922 1105 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-213ENST00000433709 HDAC8Q9BY41 377 aa8.43□□□□□ -1.06
HDAC9-213ENST00000433709 ACTR10Q9NZ32 417 aa8.43□□□□□ -1.06
HDAC9-213ENST00000433709 ZNF451Q9Y4E5 1061 aa8.43□□□□□ -1.06
HDAC9-213ENST00000433709 PCDHA11Q9Y5I1 949 aa8.43□□□□□ -1.06
HDAC9-213ENST00000433709 SPAG9O60271 1321 aaKnown RBP8.43□□□□□ -1.06
HDAC9-213ENST00000433709 MEIS1O00470 390 aa8.42□□□□□ -1.06
HDAC9-213ENST00000433709 CBFA2T2O43439 604 aa8.42□□□□□ -1.06
HDAC9-213ENST00000433709 ZNF792Q3KQV3 632 aa8.42□□□□□ -1.06
HDAC9-213ENST00000433709 ANKRD39Q53RE8 183 aa8.42□□□□□ -1.06
HDAC9-213ENST00000433709 TNNI3KQ59H18 835 aa8.42□□□□□ -1.06
HDAC9-213ENST00000433709 XP32Q5T750 250 aa8.42□□□□□ -1.06
HDAC9-213ENST00000433709 LARP1BQ659C4 914 aaKnown RBP8.42□□□□□ -1.06
HDAC9-213ENST00000433709 DAGLBQ8NCG7 672 aa8.42□□□□□ -1.06
HDAC9-213ENST00000433709 TCTN2Q96GX1 697 aa8.42□□□□□ -1.06
HDAC9-213ENST00000433709 CHST7Q9NS84 486 aa8.42□□□□□ -1.06
HDAC9-213ENST00000433709 CNTLNQ9NXG0 1405 aa8.42□□□□□ -1.06
HDAC9-213ENST00000433709 AGLP35573 1532 aa8.42□□□□□ -1.06
HDAC9-213ENST00000433709 EHBP1L1Q8N3D4 1523 aa8.42□□□□□ -1.06
HDAC9-213ENST00000433709 GPATCH8Q9UKJ3 1502 aaKnown RBP8.42□□□□□ -1.06
HDAC9-213ENST00000433709 MADDQ8WXG6 1647 aa8.41□□□□□ -1.06
HDAC9-213ENST00000433709 ABCC1P33527 1531 aa8.41□□□□□ -1.06
HDAC9-213ENST00000433709 RNASE1P07998 156 aaKnown RBP8.41□□□□□ -1.06
HDAC9-213ENST00000433709 CD247P20963 164 aa8.41□□□□□ -1.06
HDAC9-213ENST00000433709 LTKP29376 864 aa8.41□□□□□ -1.06
HDAC9-213ENST00000433709 EGR3Q06889 387 aa8.41□□□□□ -1.06
HDAC9-213ENST00000433709 KIAA1211LQ6NV74 962 aa8.41□□□□□ -1.06
HDAC9-213ENST00000433709 SLC23A3Q6PIS1 610 aa8.41□□□□□ -1.06
HDAC9-213ENST00000433709 ANKS3Q6ZW76 656 aa8.41□□□□□ -1.06
HDAC9-213ENST00000433709 USHBP1Q8N6Y0 703 aa8.41□□□□□ -1.06
HDAC9-213ENST00000433709 MICAL1Q8TDZ2 1067 aa8.41□□□□□ -1.06
HDAC9-213ENST00000433709 HNRNPLLQ8WVV9 542 aaKnown RBP8.41□□□□□ -1.06
HDAC9-213ENST00000433709 BRF1Q92994 677 aa8.41□□□□□ -1.06
HDAC9-213ENST00000433709 HAUS7Q99871 368 aa8.41□□□□□ -1.06
HDAC9-213ENST00000433709 GP6Q9HCN6 339 aa8.41□□□□□ -1.06
HDAC9-213ENST00000433709 CDC42BPBQ9Y5S2 1711 aa8.4□□□□□ -1.06
HDAC9-213ENST00000433709 ATP2B1P20020 1258 aa8.4□□□□□ -1.06
HDAC9-213ENST00000433709 ZNF445P59923 1031 aa8.4□□□□□ -1.06
HDAC9-213ENST00000433709 C6orf15Q6UXA7 325 aaPredicted RBP8.4□□□□□ -1.06
HDAC9-213ENST00000433709 ZNF655Q8N720 491 aaPredicted RBP8.4□□□□□ -1.06
HDAC9-213ENST00000433709 ADGRE2Q9UHX3 823 aa8.4□□□□□ -1.06
HDAC9-213ENST00000433709 LRRIQ1Q96JM4 1722 aa8.4□□□□□ -1.07
HDAC9-213ENST00000433709 ARHGEF12Q9NZN5 1544 aa8.39□□□□□ -1.07
HDAC9-213ENST00000433709 B2RBV5 119 aa8.39□□□□□ -1.07
HDAC9-213ENST00000433709 STK10O94804 968 aaKnown RBP8.39□□□□□ -1.07
HDAC9-213ENST00000433709 EPHX1P07099 455 aa8.39□□□□□ -1.07
HDAC9-213ENST00000433709 TSPY4P0CV99 314 aa8.39□□□□□ -1.07
HDAC9-213ENST00000433709 TSPY10P0CW01 314 aa8.39□□□□□ -1.07
HDAC9-213ENST00000433709 NOL9Q5SY16 702 aaKnown RBP8.39□□□□□ -1.07
HDAC9-213ENST00000433709 HEATR6Q6AI08 1181 aaKnown RBP8.39□□□□□ -1.07
HDAC9-213ENST00000433709 FGD4Q96M96 766 aa8.39□□□□□ -1.07
HDAC9-213ENST00000433709 SLAMF8Q9P0V8 285 aa8.39□□□□□ -1.07
HDAC9-213ENST00000433709 SUSD2Q9UGT4 822 aa8.39□□□□□ -1.07
HDAC9-213ENST00000433709 RIMS1Q86UR5 1692 aaKnown RBP8.39□□□□□ -1.07
HDAC9-213ENST00000433709 ITSN2Q9NZM3 1697 aa8.39□□□□□ -1.07
HDAC9-213ENST00000433709 RTEL1-TNFRSF6BF6WH68 1400 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 VPS8Q8N3P4 1428 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 TRAPPC8Q9Y2L5 1435 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 CDC42BPAQ5VT25 1732 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 DNAJC25-GNG10A0A024R161 153 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 KLF4O43474 513 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 GTF2F1P35269 517 aaKnown RBP eCLIP8.38□□□□□ -1.07
HDAC9-213ENST00000433709 CTSKP43235 329 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 HNRNPMP52272 730 aaKnown RBP eCLIP8.38□□□□□ -1.07
HDAC9-213ENST00000433709 TCEAL1Q15170 157 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 RALGPS1Q5JS13 557 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 CBLL1Q75N03 491 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 LRRN4CLQ8ND94 238 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 DHX38Q92620 1227 aaKnown RBP8.38□□□□□ -1.07
HDAC9-213ENST00000433709 DSCC1Q9BVC3 393 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 FOXP3Q9BZS1 431 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 KLHL25Q9H0H3 589 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 RC3H2Q9HBD1 1191 aaKnown RBP8.38□□□□□ -1.07
HDAC9-213ENST00000433709 ST7Q9NRC1 585 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 PRR13Q9NZ81 148 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 R3HCC1Q9Y3T6 440 aaKnown RBP8.38□□□□□ -1.07
HDAC9-213ENST00000433709 MAP3K1Q13233 1512 aa8.38□□□□□ -1.07
HDAC9-213ENST00000433709 DIP2CQ9Y2E4 1556 aa8.37□□□□□ -1.07
HDAC9-213ENST00000433709 SYPP08247 313 aa8.37□□□□□ -1.07
HDAC9-213ENST00000433709 TEKQ02763 1124 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms