RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 CRTAC1Q9NQ79 661 aa5.37□□□□□ -1.55
LINC01239-201ENST00000433645 FAM86C1Q9NVL1 165 aa5.37□□□□□ -1.55
LINC01239-201ENST00000433645 ERVK13-1Q9NX77 482 aa5.37□□□□□ -1.55
LINC01239-201ENST00000433645 EBF1Q9UH73 591 aa5.37□□□□□ -1.55
LINC01239-201ENST00000433645 TRBV23OR9-2A0A075B6M9 112 aa5.36□□□□□ -1.55
LINC01239-201ENST00000433645 WTIPA6NIX2 430 aaPredicted RBP5.36□□□□□ -1.55
LINC01239-201ENST00000433645 MEIS1O00470 390 aa5.36□□□□□ -1.55
LINC01239-201ENST00000433645 NOP56O00567 594 aaKnown RBP5.36□□□□□ -1.55
LINC01239-201ENST00000433645 AURKAO14965 403 aa5.36□□□□□ -1.55
LINC01239-201ENST00000433645 FGF10O15520 208 aaPredicted RBP5.36□□□□□ -1.55
LINC01239-201ENST00000433645 SUSD5O60279 629 aa5.36□□□□□ -1.55
LINC01239-201ENST00000433645 DDAH1O94760 285 aa5.36□□□□□ -1.55
LINC01239-201ENST00000433645 FYB2Q5VWT5 728 aa5.36□□□□□ -1.55
LINC01239-201ENST00000433645 HLA-DQA1Q5Y7H0 255 aa5.36□□□□□ -1.55
LINC01239-201ENST00000433645 HNRNPLLQ8WVV9 542 aaKnown RBP5.36□□□□□ -1.55
LINC01239-201ENST00000433645 HHIPL1Q96JK4 782 aa5.36□□□□□ -1.55
LINC01239-201ENST00000433645 FGD4Q96M96 766 aa5.36□□□□□ -1.55
LINC01239-201ENST00000433645 FCRL3Q96P31 734 aaPredicted RBP5.36□□□□□ -1.55
LINC01239-201ENST00000433645 CDADC1Q9BWV3 514 aa5.36□□□□□ -1.55
LINC01239-201ENST00000433645 AKT3Q9Y243 479 aa5.36□□□□□ -1.55
LINC01239-201ENST00000433645 SUGT1Q9Y2Z0 365 aa5.36□□□□□ -1.55
LINC01239-201ENST00000433645 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.36□□□□□ -1.55
LINC01239-201ENST00000433645 NOTOA8MTQ0 251 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 FKTNO75072 461 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 GJB6O95452 261 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 GSTM1P09488 218 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 TXKP42681 527 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 AMPD2Q01433 879 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 GALNT18Q6P9A2 607 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 LRP10Q7Z4F1 713 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 TRIM59Q8IWR1 403 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 ST13P5Q8NFI4 369 aaPredicted RBP5.35□□□□□ -1.55
LINC01239-201ENST00000433645 NLGN2Q8NFZ4 835 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 SREK1Q8WXA9 508 aaKnown RBP5.35□□□□□ -1.55
LINC01239-201ENST00000433645 MRGPRX3Q96LB0 322 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 CCDC140Q96MF4 163 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 ZDHHC15Q96MV8 337 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 AP5S1Q9NUS5 200 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 SIRPGQ9P1W8 387 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 APEX2Q9UBZ4 518 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 MSRB2Q9Y3D2 182 aa5.35□□□□□ -1.55
LINC01239-201ENST00000433645 ZNF503-AS2A6NEH8 195 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 AGRPO00253 132 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 TBC1D8O95759 1140 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 CEBPAP49715 358 aaPredicted RBP5.34□□□□□ -1.55
LINC01239-201ENST00000433645 CORO7P57737 925 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 RTP1P59025 263 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 ERVFC1P60507 584 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 PPP2R5DQ14738 602 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 SLC14A2Q15849 920 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 MRM1Q6IN84 353 aaKnown RBP5.34□□□□□ -1.55
LINC01239-201ENST00000433645 CEP128Q6ZU80 1094 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 SLCO6A1Q86UG4 719 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 NLRX1Q86UT6 975 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 IRF2BP1Q8IU81 584 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 CELF2-AS1Q8N7Q2 184 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 TMEM52Q8NDY8 209 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 ADCY4Q8NFM4 1077 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 MICAL1Q8TDZ2 1067 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 COPS5Q92905 334 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 SHISA4Q96DD7 197 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 SGSM3Q96HU1 749 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 PTCHD1Q96NR3 888 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 TRIM55Q9BYV6 548 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 CCDC113Q9H0I3 377 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 SLC6A17Q9H1V8 727 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 CYP26B1Q9NR63 512 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 ACSL6Q9UKU0 697 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 YBX2Q9Y2T7 364 aaKnown RBP5.34□□□□□ -1.55
LINC01239-201ENST00000433645 RNF114Q9Y508 228 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 BACE2Q9Y5Z0 518 aa5.34□□□□□ -1.55
LINC01239-201ENST00000433645 IQCA1LA6NCM1 817 aa5.33□□□□□ -1.56
LINC01239-201ENST00000433645 B2RBV5 119 aa5.33□□□□□ -1.56
LINC01239-201ENST00000433645 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.33□□□□□ -1.56
LINC01239-201ENST00000433645 HRKO00198 91 aa5.33□□□□□ -1.56
LINC01239-201ENST00000433645 U2SURPO15042 1029 aaKnown RBP5.33□□□□□ -1.56
LINC01239-201ENST00000433645 CAPNS1P04632 268 aa5.33□□□□□ -1.56
LINC01239-201ENST00000433645 SCG5P05408 212 aa5.33□□□□□ -1.56
LINC01239-201ENST00000433645 CD3EP07766 207 aa5.33□□□□□ -1.56
LINC01239-201ENST00000433645 PNLIPP16233 465 aa5.33□□□□□ -1.56
LINC01239-201ENST00000433645 LAPTM5Q13571 262 aa5.33□□□□□ -1.56
LINC01239-201ENST00000433645 HSF5Q4G112 596 aaPredicted RBP5.33□□□□□ -1.56
LINC01239-201ENST00000433645 ZPBP2Q6X784 338 aa5.33□□□□□ -1.56
LINC01239-201ENST00000433645 POU5F2Q8N7G0 328 aa5.33□□□□□ -1.56
LINC01239-201ENST00000433645 NAT16Q8N8M0 369 aa5.33□□□□□ -1.56
LINC01239-201ENST00000433645 BHLHE22Q8NFJ8 381 aaPredicted RBP5.33□□□□□ -1.56
LINC01239-201ENST00000433645 MKL1Q969V6 931 aa5.33□□□□□ -1.56
LINC01239-201ENST00000433645 C2orf71A6NGG8 1288 aa5.32□□□□□ -1.56
LINC01239-201ENST00000433645 USP2O75604 605 aaPredicted RBP5.32□□□□□ -1.56
LINC01239-201ENST00000433645 IFNGR1P15260 489 aa5.32□□□□□ -1.56
LINC01239-201ENST00000433645 HOXC12P31275 282 aa5.32□□□□□ -1.56
LINC01239-201ENST00000433645 GTF2F1P35269 517 aaKnown RBP eCLIP5.32□□□□□ -1.56
LINC01239-201ENST00000433645 SEPHS1P49903 392 aa5.32□□□□□ -1.56
LINC01239-201ENST00000433645 TESK1Q15569 626 aa5.32□□□□□ -1.56
LINC01239-201ENST00000433645 SLC10A6Q3KNW5 377 aa5.32□□□□□ -1.56
LINC01239-201ENST00000433645 SV2CQ496J9 727 aa5.32□□□□□ -1.56
LINC01239-201ENST00000433645 TIGD5Q53EQ6 642 aa5.32□□□□□ -1.56
LINC01239-201ENST00000433645 GTF2IRD2BQ6EKJ0 949 aa5.32□□□□□ -1.56
LINC01239-201ENST00000433645 GTF2IRD2Q86UP8 949 aa5.32□□□□□ -1.56
LINC01239-201ENST00000433645 KSR1Q8IVT5 923 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms