RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 KRT26Q7Z3Y9 468 aa12.84□□□□□ -0.35
SMPD4-205ENST00000431183 TICAM2Q86XR7 235 aa12.84□□□□□ -0.35
SMPD4-205ENST00000431183 TRMT44Q8IYL2 757 aaKnown RBP12.84□□□□□ -0.35
SMPD4-205ENST00000431183 FAM151AQ8WW52 585 aa12.84□□□□□ -0.35
SMPD4-205ENST00000431183 PCP11498 1178 aaKnown RBP12.83□□□□□ -0.35
SMPD4-205ENST00000431183 UBA7P41226 1012 aa12.83□□□□□ -0.35
SMPD4-205ENST00000431183 FAM160A1Q05DH4 1040 aa12.83□□□□□ -0.35
SMPD4-205ENST00000431183 SLC39A14Q15043 492 aa12.83□□□□□ -0.35
SMPD4-205ENST00000431183 DNTTIP2Q5QJE6 756 aaKnown RBP12.83□□□□□ -0.35
SMPD4-205ENST00000431183 SHC4Q6S5L8 630 aa12.83□□□□□ -0.35
SMPD4-205ENST00000431183 PAGR1Q9BTK6 254 aa12.83□□□□□ -0.35
SMPD4-205ENST00000431183 WDR19Q8NEZ3 1342 aa12.83□□□□□ -0.35
SMPD4-205ENST00000431183 LRP5O75197 1615 aa12.83□□□□□ -0.36
SMPD4-205ENST00000431183 ADCY7P51828 1080 aa12.83□□□□□ -0.36
SMPD4-205ENST00000431183 GABPAQ06546 454 aa12.83□□□□□ -0.36
SMPD4-205ENST00000431183 ZNF543Q08ER8 600 aa12.83□□□□□ -0.36
SMPD4-205ENST00000431183 KIAA1755Q5JYT7 1200 aa12.83□□□□□ -0.36
SMPD4-205ENST00000431183 MAP1SQ66K74 1059 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-205ENST00000431183 FILIP1Q7Z7B0 1213 aa12.83□□□□□ -0.36
SMPD4-205ENST00000431183 CERS3Q8IU89 383 aa12.83□□□□□ -0.36
SMPD4-205ENST00000431183 NOC3LQ8WTT2 800 aaKnown RBP12.83□□□□□ -0.36
SMPD4-205ENST00000431183 SYMPKQ92797 1274 aaKnown RBP12.83□□□□□ -0.36
SMPD4-205ENST00000431183 RBAK-RBAKDNI3L0D1 243 aa12.83□□□□□ -0.36
SMPD4-205ENST00000431183 IDEP14735 1019 aa12.83□□□□□ -0.36
SMPD4-205ENST00000431183 FUT2Q10981 343 aa12.83□□□□□ -0.36
SMPD4-205ENST00000431183 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
SMPD4-205ENST00000431183 DPY19L2Q6NUT2 758 aa12.83□□□□□ -0.36
SMPD4-205ENST00000431183 CCDC17Q96LX7 622 aa12.83□□□□□ -0.36
SMPD4-205ENST00000431183 TMEM60Q9H2L4 133 aa12.83□□□□□ -0.36
SMPD4-205ENST00000431183 RAVER2Q9HCJ3 691 aaKnown RBP12.83□□□□□ -0.36
SMPD4-205ENST00000431183 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
SMPD4-205ENST00000431183 POTEJP0CG39 1038 aa12.82□□□□□ -0.36
SMPD4-205ENST00000431183 CALML3P27482 149 aa12.82□□□□□ -0.36
SMPD4-205ENST00000431183 AOPEPQ8N6M6 819 aa12.82□□□□□ -0.36
SMPD4-205ENST00000431183 CCDC148Q8NFR7 591 aa12.82□□□□□ -0.36
SMPD4-205ENST00000431183 PURBQ96QR8 312 aaKnown RBP12.82□□□□□ -0.36
SMPD4-205ENST00000431183 SH2D3AQ9BRG2 576 aa12.82□□□□□ -0.36
SMPD4-205ENST00000431183 PALM3A6NDB9 673 aaPredicted RBP12.82□□□□□ -0.36
SMPD4-205ENST00000431183 DCPSQ96C86 337 aaKnown RBP12.82□□□□□ -0.36
SMPD4-205ENST00000431183 OTUD5Q96G74 571 aa12.82□□□□□ -0.36
SMPD4-205ENST00000431183 CDK5RAP3Q96JB5 506 aa12.82□□□□□ -0.36
SMPD4-205ENST00000431183 PCDHA4Q9UN74 947 aa12.82□□□□□ -0.36
SMPD4-205ENST00000431183 SCN9AQ15858 1988 aa12.82□□□□□ -0.36
SMPD4-205ENST00000431183 SMC2O95347 1197 aa12.82□□□□□ -0.36
SMPD4-205ENST00000431183 CACNB1Q02641 598 aaPredicted RBP12.82□□□□□ -0.36
SMPD4-205ENST00000431183 PRR16Q569H4 304 aa12.82□□□□□ -0.36
SMPD4-205ENST00000431183 ADALQ6DHV7 355 aa12.82□□□□□ -0.36
SMPD4-205ENST00000431183 C11orf57Q6ZUT1 292 aaPredicted RBP12.82□□□□□ -0.36
SMPD4-205ENST00000431183 PHF20Q9BVI0 1012 aa12.82□□□□□ -0.36
SMPD4-205ENST00000431183 DDX19AQ9NUU7 478 aaKnown RBP12.82□□□□□ -0.36
SMPD4-205ENST00000431183 ANKRD31Q8N7Z5 1873 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 C10orf71Q711Q0 1435 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 MYCLP12524 364 aaPredicted RBP12.81□□□□□ -0.36
SMPD4-205ENST00000431183 CYP4A11Q02928 519 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 TNFAIP1Q13829 316 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 CCDC178Q5BJE1 867 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 AGBL3Q8NEM8 1001 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 AGBL1Q96MI9 1066 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 MYH7P12883 1935 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 MYO3BQ8WXR4 1341 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 POTEMA6NI47 508 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 SPDYE3A6NKU9 549 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 STXBP3O00186 592 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 CDK11BP21127 795 aaKnown RBP12.81□□□□□ -0.36
SMPD4-205ENST00000431183 GNA11P29992 359 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 NONOQ15233 471 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMPD4-205ENST00000431183 GADL1Q6ZQY3 521 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 MAEAQ7L5Y9 396 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 IDI2Q9BXS1 227 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 FAM170AA1A519 330 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 DPCR1Q3MIW9 517 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 DYMQ7RTS9 669 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 FBXO11Q86XK2 927 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 POTEDQ86YR6 584 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 CEP57L1Q8IYX8 460 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 PCDHA6Q9UN73 950 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 PCDHA8Q9Y5H6 950 aa12.81□□□□□ -0.36
SMPD4-205ENST00000431183 STAT2P52630 851 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 HIRAP54198 1017 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-205ENST00000431183 TPD52L1Q16890 204 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-205ENST00000431183 DTHD1Q6ZMT9 781 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 EEPD1Q7L9B9 569 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 FOXP1Q9H334 677 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-205ENST00000431183 CLSTN2Q9H4D0 955 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 ELP3Q9H9T3 547 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 POLR3EQ9NVU0 708 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 BARHL2Q9NY43 387 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 TBC1D7Q9P0N9 293 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 CEP350Q5VT06 3117 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 RREB1Q92766 1687 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 PPP1R11O60927 126 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-205ENST00000431183 ADCY5O95622 1261 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 PRR29P0C7W0 189 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 SYDE2Q5VT97 1194 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 CLEC17AQ6ZS10 378 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 GMLQ99445 158 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 CEP131Q9UPN4 1083 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 ENTPD3O75355 529 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 FGRP09769 529 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 U2AF2P26368 475 aaKnown RBP eCLIP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms