RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 ADAMTS5Q9UNA0 930 aa12.74□□□□□ -0.37
CHD4-202ENST00000430771 RABGAP1Q9Y3P9 1069 aa12.74□□□□□ -0.37
CHD4-202ENST00000430771 KIF3AQ9Y496 699 aa12.74□□□□□ -0.37
CHD4-202ENST00000430771 PTPDC1A2A3K4 754 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 ATP2A1O14983 1001 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 PRPF3O43395 683 aaKnown RBP12.73□□□□□ -0.37
CHD4-202ENST00000430771 TLR2O60603 784 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 DEXIO95424 95 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 FMNL1O95466 1100 aaPredicted RBP12.73□□□□□ -0.37
CHD4-202ENST00000430771 ICAM1P05362 532 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 HSP90AA1P07900 732 aaKnown RBP12.73□□□□□ -0.37
CHD4-202ENST00000430771 CCNA1P78396 465 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 FUT2Q10981 343 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 ST3GAL1Q11201 340 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 CRHR2Q13324 411 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 QRICH1Q2TAL8 776 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 CCDC174Q6PII3 467 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 NBPF11Q86T75 865 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 CMTR1Q8N1G2 835 aaKnown RBP12.73□□□□□ -0.37
CHD4-202ENST00000430771 CCDC82Q8N4S0 544 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 NSUN7Q8NE18 718 aaKnown RBP12.73□□□□□ -0.37
CHD4-202ENST00000430771 REPS2Q8NFH8 660 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 WASF1Q92558 559 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 PHKBQ93100 1093 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 PIGSQ96S52 555 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 AMNQ9BXJ7 453 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 VAT1LQ9HCJ6 419 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 CCPG1Q9ULG6 757 aa12.73□□□□□ -0.37
CHD4-202ENST00000430771 PNMA6FA0A0J9YX94 578 aa12.72□□□□□ -0.37
CHD4-202ENST00000430771 ERVK-9P63128 1117 aa12.72□□□□□ -0.37
CHD4-202ENST00000430771 ERVK-24P63145 666 aa12.72□□□□□ -0.37
CHD4-202ENST00000430771 CUL4AQ13619 759 aa12.72□□□□□ -0.37
CHD4-202ENST00000430771 PLS1Q14651 629 aa12.72□□□□□ -0.37
CHD4-202ENST00000430771 SLC35G1Q2M3R5 365 aa12.72□□□□□ -0.37
CHD4-202ENST00000430771 SNRNP48Q6IEG0 339 aaKnown RBP12.72□□□□□ -0.37
CHD4-202ENST00000430771 PPP1R18Q6NYC8 613 aa12.72□□□□□ -0.37
CHD4-202ENST00000430771 DNAJC5GQ8N7S2 189 aa12.72□□□□□ -0.37
CHD4-202ENST00000430771 CCDC148Q8NFR7 591 aa12.72□□□□□ -0.37
CHD4-202ENST00000430771 CCDC12Q8WUD4 166 aaPredicted RBP12.72□□□□□ -0.37
CHD4-202ENST00000430771 TSHZ2Q9NRE2 1034 aa12.72□□□□□ -0.37
CHD4-202ENST00000430771 MORF4L1Q9UBU8 362 aa12.72□□□□□ -0.37
CHD4-202ENST00000430771 ZNF214Q9UL59 606 aaPredicted RBP12.72□□□□□ -0.37
CHD4-202ENST00000430771 BAZ2BQ9UIF8 2168 aaKnown RBP12.71□□□□□ -0.37
CHD4-202ENST00000430771 ABCB11O95342 1321 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 SLC25A27O95847 323 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 BCRP11274 1271 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 SCG2P13521 617 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 XBP1P17861 261 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 TMEM132BQ14DG7 1078 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 PFKFB3Q16875 520 aaPredicted RBP12.71□□□□□ -0.37
CHD4-202ENST00000430771 TKFCQ3LXA3 575 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 FBXO11Q86XK2 927 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 RIOX2Q8IUF8 465 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 CPXCR1Q8N123 301 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 ANKRD13CQ8N6S4 541 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 FAM184AQ8NB25 1140 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 GPRC5AQ8NFJ5 357 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 SMARCC2Q8TAQ2 1214 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 PIBF1Q8WXW3 757 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 INTS4Q96HW7 963 aaKnown RBP12.71□□□□□ -0.37
CHD4-202ENST00000430771 SPATC1LQ9H0A9 340 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 CWC22Q9HCG8 908 aaKnown RBP12.71□□□□□ -0.37
CHD4-202ENST00000430771 RAVER2Q9HCJ3 691 aaKnown RBP12.71□□□□□ -0.37
CHD4-202ENST00000430771 RNF186Q9NXI6 227 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 ORC3Q9UBD5 711 aaPredicted RBP12.71□□□□□ -0.37
CHD4-202ENST00000430771 SMC3Q9UQE7 1217 aa12.71□□□□□ -0.37
CHD4-202ENST00000430771 PLXNB2O15031 1838 aa12.71□□□□□ -0.38
CHD4-202ENST00000430771 ZNF236Q9UL36 1845 aa12.71□□□□□ -0.38
CHD4-202ENST00000430771 MGAMO43451 1857 aa12.7□□□□□ -0.38
CHD4-202ENST00000430771 ZNF536O15090 1300 aa12.7□□□□□ -0.38
CHD4-202ENST00000430771 CNMDO75829 334 aa12.7□□□□□ -0.38
CHD4-202ENST00000430771 CTDNEP1O95476 244 aa12.7□□□□□ -0.38
CHD4-202ENST00000430771 STAT3P40763 770 aa12.7□□□□□ -0.38
CHD4-202ENST00000430771 SNAP25P60880 206 aa12.7□□□□□ -0.38
CHD4-202ENST00000430771 USH1GQ495M9 461 aa12.7□□□□□ -0.38
CHD4-202ENST00000430771 HEATR3Q7Z4Q2 680 aa12.7□□□□□ -0.38
CHD4-202ENST00000430771 CCAR1Q8IX12 1150 aaKnown RBP12.7□□□□□ -0.38
CHD4-202ENST00000430771 FAM177A1Q8N128 213 aaPredicted RBP12.7□□□□□ -0.38
CHD4-202ENST00000430771 SHCBP1Q8NEM2 672 aa12.7□□□□□ -0.38
CHD4-202ENST00000430771 TXNRD2Q9NNW7 524 aa12.7□□□□□ -0.38
CHD4-202ENST00000430771 BTBD7Q9P203 1132 aa12.7□□□□□ -0.38
CHD4-202ENST00000430771 FBXO40Q9UH90 709 aa12.7□□□□□ -0.38
CHD4-202ENST00000430771 CPA4Q9UI42 421 aa12.7□□□□□ -0.38
CHD4-202ENST00000430771 V9GY48 417 aaPredicted RBP12.7□□□□□ -0.38
CHD4-202ENST00000430771 JAK2O60674 1132 aa12.69□□□□□ -0.38
CHD4-202ENST00000430771 TRPA1O75762 1119 aa12.69□□□□□ -0.38
CHD4-202ENST00000430771 ALAS1P13196 640 aa12.69□□□□□ -0.38
CHD4-202ENST00000430771 NAPAP54920 295 aa12.69□□□□□ -0.38
CHD4-202ENST00000430771 WWC2Q6AWC2 1192 aa12.69□□□□□ -0.38
CHD4-202ENST00000430771 C17orf99Q6UX52 265 aa12.69□□□□□ -0.38
CHD4-202ENST00000430771 NCAPG2Q86XI2 1143 aa12.69□□□□□ -0.38
CHD4-202ENST00000430771 CHST13Q8NET6 341 aa12.69□□□□□ -0.38
CHD4-202ENST00000430771 GPKOWQ92917 476 aaPredicted RBP eCLIP12.69□□□□□ -0.38
CHD4-202ENST00000430771 DDX11Q96FC9 970 aa12.69□□□□□ -0.38
CHD4-202ENST00000430771 MOV10L1Q9BXT6 1211 aaKnown RBP12.69□□□□□ -0.38
CHD4-202ENST00000430771 MROH8Q9H579 483 aa12.69□□□□□ -0.38
CHD4-202ENST00000430771 ACAD9Q9H845 621 aa12.69□□□□□ -0.38
CHD4-202ENST00000430771 RNF146Q9NTX7 359 aa12.69□□□□□ -0.38
CHD4-202ENST00000430771 RBPJLQ9UBG7 517 aa12.69□□□□□ -0.38
CHD4-202ENST00000430771 DAXXQ9UER7 740 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms