RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 RTN1Q16799 776 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 CCDC181Q5TID7 509 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 C8orf74Q6P047 294 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 CCDC121Q6ZUS5 278 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 MS4A14Q96JA4 679 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 OSBPL9Q96SU4 736 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 LGALS16A8MUM7 142 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 GLI1P08151 1106 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 TRIM21P19474 475 aaKnown RBP12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 TRADDQ15628 312 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 FUKQ8N0W3 1084 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 IQCKQ8N0W5 287 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 CAVIN3Q969G5 261 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 CYFIP2Q96F07 1278 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 PAGR1Q9BTK6 254 aa12.35□□□□□ -0.43
SEMA4D-209ENST00000429836 IDH1O75874 414 aaKnown RBP12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 NAA25Q14CX7 972 aa12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 KCTD19Q17RG1 926 aaPredicted RBP12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 TICAM2Q86XR7 235 aa12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 FNBP4Q8N3X1 1017 aaPredicted RBP12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 ANKRD13CQ8N6S4 541 aa12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 PIK3R5Q8WYR1 880 aa12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 PCMTD1Q96MG8 357 aaPredicted RBP12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 PURBQ96QR8 312 aaKnown RBP12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 OSBPL7Q9BZF2 842 aa12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 PLEKHG1Q9ULL1 1385 aa12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 GOLGA6L7A0A1B0GV03 622 aa12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 RASSF10A6NK89 507 aa12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 A6NNZ2 444 aa12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 FAM107AO95990 144 aa12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 TCIRG1Q13488 830 aa12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 MEA1Q16626 185 aa12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 QPCTQ16769 361 aa12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 TUBB8Q3ZCM7 444 aa12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 C6orf89Q6UWU4 347 aa12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 CRACR2BQ8N4Y2 399 aaPredicted RBP12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 ZNHIT6Q9NWK9 470 aaKnown RBP12.34□□□□□ -0.43
SEMA4D-209ENST00000429836 DEXIO95424 95 aa12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 VAV2P52735 878 aa12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 MRPL12P52815 198 aaKnown RBP12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 GUCY2DQ02846 1103 aa12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 ZNF507Q8TCN5 953 aa12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 SLC52A2Q9HAB3 445 aa12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 EPB41L5Q9HCM4 733 aa12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 TBC1D2BQ9UPU7 963 aa12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 ADD2P35612 726 aa12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 MCAMP43121 646 aa12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 PLCB4Q15147 1175 aa12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 TTLL7Q6ZT98 887 aa12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 MAATS1Q7Z4T9 603 aa12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 PLBD2Q8NHP8 589 aa12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 SGSM3Q96HU1 749 aa12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 TRIM6Q9C030 488 aaPredicted RBP12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 ZNF142P52746 1687 aaPredicted RBP12.33□□□□□ -0.44
SEMA4D-209ENST00000429836 TACC1O75410 805 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 EZRP15311 586 aaKnown RBP12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 PDE6BP35913 854 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 CCNHP51946 323 aaPredicted RBP12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 CRYMQ14894 314 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 ACCSLQ4AC99 568 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 ZNF658Q5TYW1 1059 aaPredicted RBP12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 ZNF662Q6ZS27 426 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 TBC1D31Q96DN5 1066 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 ATP6V1G3Q96LB4 118 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 PIH1D3Q9NQM4 214 aaKnown RBP12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 SIPA1L3O60292 1781 aaPredicted RBP12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 ZNF532Q9HCE3 1301 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 HEXIM1O94992 359 aaKnown RBP12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 RPN1P04843 607 aaKnown RBP12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 LIFRP42702 1097 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 SF3A3Q12874 501 aaKnown RBP eCLIP12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 PTGDRQ13258 359 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 ESCO1Q5FWF5 840 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 PDXDC2PQ6P474 469 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 EGFL6Q8IUX8 553 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 TRIM58Q8NG06 486 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 OR2W6PQ8NHA6 318 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 TRIM47Q96LD4 638 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 ZBTB3Q9H5J0 574 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 CWC25Q9NXE8 425 aaPredicted RBP12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 SPEF2Q9C093 1822 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 NUTM2BA6NNL0 878 aaPredicted RBP12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 NUTM2EB1AL46 878 aaPredicted RBP12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 NKRFO15226 690 aaKnown RBP eCLIP12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 RTN2O75298 545 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 SNRPA1P09661 255 aaKnown RBP12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 TMOD1P28289 359 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 GBP2P32456 591 aaPredicted RBP12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 ITGB3BPQ13352 177 aaPredicted RBP12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 SPA17Q15506 151 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 TYW1BQ6NUM6 668 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 TLDC1Q6P9B6 456 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 CCDC42Q96M95 316 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 UBAC1Q9BSL1 405 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 IFIH1Q9BYX4 1025 aaKnown RBP12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 HYOU1Q9Y4L1 999 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 ARFGEF2Q9Y6D5 1785 aa12.32□□□□□ -0.44
SEMA4D-209ENST00000429836 PDS5AQ29RF7 1337 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-209ENST00000429836 A0A1W2PQC6 194 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms