RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	BMP3	P12645	472 aa		21.01	■□□□□ 0.95
MRPL28-203	ENST00000429738	MYLIP	Q8WY64	445 aa		21.01	■□□□□ 0.95
MRPL28-203	ENST00000429738	GMCL1	Q96IK5	515 aa		21.01	■□□□□ 0.95
MRPL28-203	ENST00000429738	PRUNE2	Q8WUY3	3088 aa		21.01	■□□□□ 0.95
MRPL28-203	ENST00000429738	ITGB8	P26012	769 aa		21	■□□□□ 0.95
MRPL28-203	ENST00000429738	OAZ1	P54368	228 aa		21	■□□□□ 0.95
MRPL28-203	ENST00000429738	RNF180	Q86T96	592 aa		21	■□□□□ 0.95
MRPL28-203	ENST00000429738	RILPL2	Q969X0	211 aa		21	■□□□□ 0.95
MRPL28-203	ENST00000429738	KIFC2	Q96AC6	838 aa		21	■□□□□ 0.95
MRPL28-203	ENST00000429738	TINF2	Q9BSI4	451 aa		21	■□□□□ 0.95
MRPL28-203	ENST00000429738	SUPT16H	Q9Y5B9	1047 aa	Known RBP	21	■□□□□ 0.95
MRPL28-203	ENST00000429738	CCDC171	Q6TFL3	1326 aa		21	■□□□□ 0.95
MRPL28-203	ENST00000429738	DNAJC25-GNG10	A0A024R161	153 aa		20.99	■□□□□ 0.95
MRPL28-203	ENST00000429738	KIAA0355	O15063	1070 aa		20.99	■□□□□ 0.95
MRPL28-203	ENST00000429738	NMT2	O60551	498 aa		20.99	■□□□□ 0.95
MRPL28-203	ENST00000429738	ZBED4	O75132	1171 aa		20.99	■□□□□ 0.95
MRPL28-203	ENST00000429738	CLTB	P09497	229 aa		20.99	■□□□□ 0.95
MRPL28-203	ENST00000429738	FDX1	P10109	184 aa		20.99	■□□□□ 0.95
MRPL28-203	ENST00000429738	SDS	P20132	328 aa		20.99	■□□□□ 0.95
MRPL28-203	ENST00000429738	STX8	Q9UNK0	236 aa		20.99	■□□□□ 0.95
MRPL28-203	ENST00000429738	CDH23	Q9H251	3354 aa		20.98	■□□□□ 0.95
MRPL28-203	ENST00000429738	TMEM265	A0A087WTH1	108 aa		20.98	■□□□□ 0.95
MRPL28-203	ENST00000429738	PLA2G6	O60733	806 aa		20.98	■□□□□ 0.95
MRPL28-203	ENST00000429738	PGK1	P00558	417 aa		20.98	■□□□□ 0.95
MRPL28-203	ENST00000429738	STAT2	P52630	851 aa		20.98	■□□□□ 0.95
MRPL28-203	ENST00000429738	CPXCR1	Q8N123	301 aa		20.98	■□□□□ 0.95
MRPL28-203	ENST00000429738	RAVER2	Q9HCJ3	691 aa	Known RBP	20.98	■□□□□ 0.95
MRPL28-203	ENST00000429738	TMEM232	C9JQI7	657 aa		20.97	■□□□□ 0.95
MRPL28-203	ENST00000429738	RANBP6	O60518	1105 aa	Known RBP	20.97	■□□□□ 0.95
MRPL28-203	ENST00000429738	FOSL2	P15408	326 aa		20.97	■□□□□ 0.95
MRPL28-203	ENST00000429738	RAG1	P15918	1043 aa		20.97	■□□□□ 0.95
MRPL28-203	ENST00000429738	TAL1	P17542	331 aa	Predicted RBP	20.97	■□□□□ 0.95
MRPL28-203	ENST00000429738	SLC1A4	P43007	532 aa		20.97	■□□□□ 0.95
MRPL28-203	ENST00000429738	EPHB4	P54760	987 aa		20.97	■□□□□ 0.95
MRPL28-203	ENST00000429738	FAM160B2	Q86V87	743 aa		20.97	■□□□□ 0.95
MRPL28-203	ENST00000429738	MSL3	Q8N5Y2	521 aa	Known RBP	20.97	■□□□□ 0.95
MRPL28-203	ENST00000429738	STAG1	Q8WVM7	1258 aa		20.97	■□□□□ 0.95
MRPL28-203	ENST00000429738	RNPC3	Q96LT9	517 aa	Known RBP	20.97	■□□□□ 0.95
MRPL28-203	ENST00000429738	ZNF865	P0CJ78	1059 aa	Predicted RBP	20.96	■□□□□ 0.95
MRPL28-203	ENST00000429738	MCC	P23508	829 aa		20.96	■□□□□ 0.95
MRPL28-203	ENST00000429738	CHST13	Q8NET6	341 aa		20.96	■□□□□ 0.95
MRPL28-203	ENST00000429738	CHURC1	Q8WUH1	139 aa		20.96	■□□□□ 0.95
MRPL28-203	ENST00000429738	TSEN34	Q9BSV6	310 aa	Known RBP	20.96	■□□□□ 0.95
MRPL28-203	ENST00000429738	TCP11L1	Q9NUJ3	509 aa		20.96	■□□□□ 0.95
MRPL28-203	ENST00000429738	TMEM39A	Q9NV64	488 aa		20.96	■□□□□ 0.95
MRPL28-203	ENST00000429738	LAMA4	Q16363	1823 aa		20.96	■□□□□ 0.95
MRPL28-203	ENST00000429738	SPTBN5	Q9NRC6	3674 aa	Known RBP	20.96	■□□□□ 0.95
MRPL28-203	ENST00000429738	ZNF536	O15090	1300 aa		20.96	■□□□□ 0.95
MRPL28-203	ENST00000429738	MCM3AP	O60318	1980 aa		20.96	■□□□□ 0.95
MRPL28-203	ENST00000429738		A0A1W2PQ45	241 aa	Predicted RBP	20.95	■□□□□ 0.94
MRPL28-203	ENST00000429738		A0A1W2PQY0	241 aa		20.95	■□□□□ 0.94
MRPL28-203	ENST00000429738	PQBP1	O60828	265 aa	Known RBP	20.95	■□□□□ 0.94
MRPL28-203	ENST00000429738	AKR1A1	P14550	325 aa		20.95	■□□□□ 0.94
MRPL28-203	ENST00000429738	RCSD1	Q6JBY9	416 aa		20.95	■□□□□ 0.94
MRPL28-203	ENST00000429738	MAMDC4	Q6UXC1	1216 aa		20.95	■□□□□ 0.94
MRPL28-203	ENST00000429738	TOX2	Q96NM4	488 aa		20.95	■□□□□ 0.94
MRPL28-203	ENST00000429738	FBXO40	Q9UH90	709 aa		20.95	■□□□□ 0.94
MRPL28-203	ENST00000429738	CTDP1	Q9Y5B0	961 aa	Predicted RBP	20.95	■□□□□ 0.94
MRPL28-203	ENST00000429738	SYNGAP1	Q96PV0	1343 aa		20.95	■□□□□ 0.94
MRPL28-203	ENST00000429738	PC	P11498	1178 aa	Known RBP	20.94	■□□□□ 0.94
MRPL28-203	ENST00000429738	MFAP1	P55081	439 aa	Known RBP	20.94	■□□□□ 0.94
MRPL28-203	ENST00000429738	FPGS	Q05932	587 aa		20.94	■□□□□ 0.94
MRPL28-203	ENST00000429738	KCTD1	Q719H9	257 aa		20.94	■□□□□ 0.94
MRPL28-203	ENST00000429738	RASGRP2	Q7LDG7	609 aa		20.94	■□□□□ 0.94
MRPL28-203	ENST00000429738	ANKRD33	Q7Z3H0	272 aa		20.94	■□□□□ 0.94
MRPL28-203	ENST00000429738	ZNF467	Q7Z7K2	595 aa	Predicted RBP	20.94	■□□□□ 0.94
MRPL28-203	ENST00000429738	DDX11	Q96FC9	970 aa		20.94	■□□□□ 0.94
MRPL28-203	ENST00000429738	FGD4	Q96M96	766 aa		20.94	■□□□□ 0.94
MRPL28-203	ENST00000429738	CNPY2	Q9Y2B0	182 aa		20.94	■□□□□ 0.94
MRPL28-203	ENST00000429738	MYO9B	Q13459	2157 aa		20.94	■□□□□ 0.94
MRPL28-203	ENST00000429738	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	20.93	■□□□□ 0.94
MRPL28-203	ENST00000429738	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	20.93	■□□□□ 0.94
MRPL28-203	ENST00000429738	DCDC2C	A8MYV0	355 aa		20.93	■□□□□ 0.94
MRPL28-203	ENST00000429738	ADAMTS4	O75173	837 aa		20.93	■□□□□ 0.94
MRPL28-203	ENST00000429738	SNAI1	O95863	264 aa	Predicted RBP	20.93	■□□□□ 0.94
MRPL28-203	ENST00000429738	HAND2	P61296	217 aa		20.93	■□□□□ 0.94
MRPL28-203	ENST00000429738	FAAP100	Q0VG06	881 aa		20.93	■□□□□ 0.94
MRPL28-203	ENST00000429738	AKNAD1	Q5T1N1	836 aa		20.93	■□□□□ 0.94
MRPL28-203	ENST00000429738	SYMPK	Q92797	1274 aa	Known RBP	20.93	■□□□□ 0.94
MRPL28-203	ENST00000429738	SLC4A3	P48751	1232 aa		20.92	■□□□□ 0.94
MRPL28-203	ENST00000429738	ACLY	P53396	1101 aa		20.92	■□□□□ 0.94
MRPL28-203	ENST00000429738	RRP12	Q5JTH9	1297 aa	Known RBP	20.92	■□□□□ 0.94
MRPL28-203	ENST00000429738	CWC27	Q6UX04	472 aa	Known RBP	20.92	■□□□□ 0.94
MRPL28-203	ENST00000429738	TBC1D10C	Q8IV04	446 aa		20.92	■□□□□ 0.94
MRPL28-203	ENST00000429738	KLHDC9	Q8NEP7	349 aa		20.92	■□□□□ 0.94
MRPL28-203	ENST00000429738	NUP133	Q8WUM0	1156 aa		20.92	■□□□□ 0.94
MRPL28-203	ENST00000429738	DCAF4	Q8WV16	495 aa		20.92	■□□□□ 0.94
MRPL28-203	ENST00000429738	TMEM47	Q9BQJ4	181 aa		20.92	■□□□□ 0.94
MRPL28-203	ENST00000429738	PRDM6	Q9NQX0	595 aa		20.92	■□□□□ 0.94
MRPL28-203	ENST00000429738	STARD7	Q9NQZ5	370 aa		20.92	■□□□□ 0.94
MRPL28-203	ENST00000429738	TOMM22	Q9NS69	142 aa		20.92	■□□□□ 0.94
MRPL28-203	ENST00000429738	PRR12	Q9ULL5	1215 aa		20.92	■□□□□ 0.94
MRPL28-203	ENST00000429738	HIP1	O00291	1037 aa		20.91	■□□□□ 0.94
MRPL28-203	ENST00000429738	TOP1	P11387	765 aa	Known RBP	20.91	■□□□□ 0.94
MRPL28-203	ENST00000429738	GRIN2C	Q14957	1233 aa		20.91	■□□□□ 0.94
MRPL28-203	ENST00000429738	BTNL9	Q6UXG8	535 aa		20.91	■□□□□ 0.94
MRPL28-203	ENST00000429738	MFSD6	Q6ZSS7	791 aa		20.91	■□□□□ 0.94
MRPL28-203	ENST00000429738	ANKRD35	Q8N283	1001 aa		20.91	■□□□□ 0.94
MRPL28-203	ENST00000429738	LENG1	Q96BZ8	264 aa	Predicted RBP	20.91	■□□□□ 0.94
MRPL28-203	ENST00000429738	CHMP4C	Q96CF2	233 aa		20.91	■□□□□ 0.94

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