RNA–Protein interactions for RNA: ENST00000429051.1

RCC1-208, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 3

Gene RCC1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-208ENST00000429051 BTNL9Q6UXG8 535 aa13.52□□□□□ -0.25
RCC1-208ENST00000429051 DIS3LQ8TF46 1054 aaKnown RBP13.52□□□□□ -0.25
RCC1-208ENST00000429051 ZSCAN10Q96SZ4 725 aaPredicted RBP13.52□□□□□ -0.25
RCC1-208ENST00000429051 ZKSCAN3Q9BRR0 538 aa13.52□□□□□ -0.25
RCC1-208ENST00000429051 IL25Q9H293 177 aa13.52□□□□□ -0.25
RCC1-208ENST00000429051 HOMER2Q9NSB8 354 aa13.52□□□□□ -0.25
RCC1-208ENST00000429051 CNPY2Q9Y2B0 182 aa13.52□□□□□ -0.25
RCC1-208ENST00000429051 PFASO15067 1338 aa13.51□□□□□ -0.25
RCC1-208ENST00000429051 TNKSO95271 1327 aa13.51□□□□□ -0.25
RCC1-208ENST00000429051 FRMPD2Q68DX3 1309 aaPredicted RBP13.51□□□□□ -0.25
RCC1-208ENST00000429051 SYNGAP1Q96PV0 1343 aa13.51□□□□□ -0.25
RCC1-208ENST00000429051 DNAJC25-GNG10A0A024R161 153 aa13.51□□□□□ -0.25
RCC1-208ENST00000429051 CCDC174Q6PII3 467 aa13.51□□□□□ -0.25
RCC1-208ENST00000429051 KIAA1211Q6ZU35 1233 aa13.51□□□□□ -0.25
RCC1-208ENST00000429051 RASGRP2Q7LDG7 609 aa13.51□□□□□ -0.25
RCC1-208ENST00000429051 ZNF467Q7Z7K2 595 aaPredicted RBP13.51□□□□□ -0.25
RCC1-208ENST00000429051 PNMA1Q8ND90 353 aa13.51□□□□□ -0.25
RCC1-208ENST00000429051 TRPV1Q8NER1 839 aa13.51□□□□□ -0.25
RCC1-208ENST00000429051 AGBL1Q96MI9 1066 aa13.51□□□□□ -0.25
RCC1-208ENST00000429051 TRERF1Q96PN7 1200 aa13.51□□□□□ -0.25
RCC1-208ENST00000429051 RANBP17Q9H2T7 1088 aaKnown RBP13.51□□□□□ -0.25
RCC1-208ENST00000429051 GPCPD1Q9NPB8 672 aa13.51□□□□□ -0.25
RCC1-208ENST00000429051 RNF146Q9NTX7 359 aa13.51□□□□□ -0.25
RCC1-208ENST00000429051 ZSWIM5Q9P217 1185 aa13.51□□□□□ -0.25
RCC1-208ENST00000429051 CCPG1Q9ULG6 757 aa13.51□□□□□ -0.25
RCC1-208ENST00000429051 ZNF536O15090 1300 aa13.5□□□□□ -0.25
RCC1-208ENST00000429051 ICAM1P05362 532 aa13.5□□□□□ -0.25
RCC1-208ENST00000429051 SNHG28P0DPA3 235 aa13.5□□□□□ -0.25
RCC1-208ENST00000429051 ALAS1P13196 640 aa13.5□□□□□ -0.25
RCC1-208ENST00000429051 ZNF543Q08ER8 600 aa13.5□□□□□ -0.25
RCC1-208ENST00000429051 RALYLQ86SE5 291 aaKnown RBP13.5□□□□□ -0.25
RCC1-208ENST00000429051 ARRDC4Q8NCT1 418 aa13.5□□□□□ -0.25
RCC1-208ENST00000429051 ANKS1AQ92625 1134 aa13.5□□□□□ -0.25
RCC1-208ENST00000429051 CCDC136Q96JN2 1154 aa13.5□□□□□ -0.25
RCC1-208ENST00000429051 ERICH2A1L162 156 aa13.49□□□□□ -0.25
RCC1-208ENST00000429051 KBTBD13C9JR72 458 aa13.49□□□□□ -0.25
RCC1-208ENST00000429051 H0YGN5 161 aa13.49□□□□□ -0.25
RCC1-208ENST00000429051 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
RCC1-208ENST00000429051 DNM1LO00429 736 aa13.49□□□□□ -0.25
RCC1-208ENST00000429051 CYP21A2P08686 494 aa13.49□□□□□ -0.25
RCC1-208ENST00000429051 RARBP10826 455 aa13.49□□□□□ -0.25
RCC1-208ENST00000429051 SLC16A2P36021 539 aa13.49□□□□□ -0.25
RCC1-208ENST00000429051 MNX1P50219 401 aaPredicted RBP13.49□□□□□ -0.25
RCC1-208ENST00000429051 PTH1RQ03431 593 aa13.49□□□□□ -0.25
RCC1-208ENST00000429051 SART3Q15020 963 aaKnown RBP13.49□□□□□ -0.25
RCC1-208ENST00000429051 BMP2KLQ5H9B9 411 aa13.49□□□□□ -0.25
RCC1-208ENST00000429051 PRAMEF19Q5SWL8 479 aa13.49□□□□□ -0.25
RCC1-208ENST00000429051 IFIT1BQ5T764 474 aaKnown RBP13.49□□□□□ -0.25
RCC1-208ENST00000429051 TTBK2Q6IQ55 1244 aa13.49□□□□□ -0.25
RCC1-208ENST00000429051 CASC1Q6TDU7 716 aa13.49□□□□□ -0.25
RCC1-208ENST00000429051 MAMDC4Q6UXC1 1216 aa13.49□□□□□ -0.25
RCC1-208ENST00000429051 ENAHQ8N8S7 591 aaPredicted RBP13.49□□□□□ -0.25
RCC1-208ENST00000429051 COL6A1P12109 1028 aa13.48□□□□□ -0.25
RCC1-208ENST00000429051 AKR1A1P14550 325 aa13.48□□□□□ -0.25
RCC1-208ENST00000429051 SNAP25P60880 206 aa13.48□□□□□ -0.25
RCC1-208ENST00000429051 ASPRV1Q53RT3 343 aa13.48□□□□□ -0.25
RCC1-208ENST00000429051 NCOA7Q8NI08 942 aa13.48□□□□□ -0.25
RCC1-208ENST00000429051 MAP4K1Q92918 833 aa13.48□□□□□ -0.25
RCC1-208ENST00000429051 A1CFQ9NQ94 594 aaKnown RBP13.48□□□□□ -0.25
RCC1-208ENST00000429051 DNAH12Q6ZR08 3092 aa13.48□□□□□ -0.25
RCC1-208ENST00000429051 ALPK3Q96L96 1907 aa13.48□□□□□ -0.25
RCC1-208ENST00000429051 WDR19Q8NEZ3 1342 aa13.47□□□□□ -0.25
RCC1-208ENST00000429051 ASB14A6NK59 587 aa13.47□□□□□ -0.25
RCC1-208ENST00000429051 ESYT1Q9BSJ8 1104 aa13.47□□□□□ -0.25
RCC1-208ENST00000429051 ABHD16BQ9H3Z7 469 aa13.47□□□□□ -0.25
RCC1-208ENST00000429051 XPNPEP3Q9NQH7 507 aa13.47□□□□□ -0.25
RCC1-208ENST00000429051 ZHX1Q9UKY1 873 aaPredicted RBP13.47□□□□□ -0.25
RCC1-208ENST00000429051 FAM184BQ9ULE4 1060 aa13.47□□□□□ -0.25
RCC1-208ENST00000429051 RBM8AQ9Y5S9 174 aaKnown RBP13.47□□□□□ -0.25
RCC1-208ENST00000429051 E7EWF7 191 aa13.46□□□□□ -0.25
RCC1-208ENST00000429051 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.25
RCC1-208ENST00000429051 PARP1P09874 1014 aaKnown RBP13.46□□□□□ -0.25
RCC1-208ENST00000429051 ZNF865P0CJ78 1059 aaPredicted RBP13.46□□□□□ -0.25
RCC1-208ENST00000429051 GOLGA8HP0CJ92 632 aa13.46□□□□□ -0.25
RCC1-208ENST00000429051 MUM1L1Q5H9M0 696 aa13.46□□□□□ -0.25
RCC1-208ENST00000429051 GJC2Q5T442 439 aaPredicted RBP13.46□□□□□ -0.25
RCC1-208ENST00000429051 ANO1Q5XXA6 986 aa13.46□□□□□ -0.25
RCC1-208ENST00000429051 NSMFQ6X4W1 530 aa13.46□□□□□ -0.25
RCC1-208ENST00000429051 ARMCX2Q7L311 632 aa13.46□□□□□ -0.25
RCC1-208ENST00000429051 RNF180Q86T96 592 aa13.46□□□□□ -0.25
RCC1-208ENST00000429051 C7orf61Q8IZ16 206 aa13.46□□□□□ -0.25
RCC1-208ENST00000429051 FAM133AQ8N9E0 248 aa13.46□□□□□ -0.25
RCC1-208ENST00000429051 SENP6Q9GZR1 1112 aaPredicted RBP13.46□□□□□ -0.25
RCC1-208ENST00000429051 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.46□□□□□ -0.25
RCC1-208ENST00000429051 CYP39A1Q9NYL5 469 aa13.46□□□□□ -0.25
RCC1-208ENST00000429051 ADD3Q9UEY8 706 aaKnown RBP13.46□□□□□ -0.25
RCC1-208ENST00000429051 IFIT3O14879 490 aaKnown RBP13.45□□□□□ -0.26
RCC1-208ENST00000429051 DHX16O60231 1041 aaKnown RBP13.45□□□□□ -0.26
RCC1-208ENST00000429051 SNAI1O95863 264 aaPredicted RBP13.45□□□□□ -0.26
RCC1-208ENST00000429051 TAL1P17542 331 aaPredicted RBP13.45□□□□□ -0.26
RCC1-208ENST00000429051 CNTN2Q02246 1040 aa13.45□□□□□ -0.26
RCC1-208ENST00000429051 ACVR2BQ13705 512 aa13.45□□□□□ -0.26
RCC1-208ENST00000429051 SEC23AQ15436 765 aa13.45□□□□□ -0.26
RCC1-208ENST00000429051 CYB5R4Q7L1T6 521 aa13.45□□□□□ -0.26
RCC1-208ENST00000429051 CCDC144CPQ8IYA2 1237 aa13.45□□□□□ -0.26
RCC1-208ENST00000429051 MPHOSPH6Q99547 160 aaKnown RBP13.45□□□□□ -0.26
RCC1-208ENST00000429051 ANO2Q9NQ90 1003 aa13.45□□□□□ -0.26
RCC1-208ENST00000429051 MCM3APO60318 1980 aa13.45□□□□□ -0.26
RCC1-208ENST00000429051 MYH6P13533 1939 aa13.45□□□□□ -0.26
RCC1-208ENST00000429051 LOC102724159A0A0B4J2E5 919 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms