RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 COA7Q96BR5 231 aa14.59□□□□□ -0.07
HMGB3P4-201ENST00000428776 USP28Q96RU2 1077 aa14.59□□□□□ -0.07
HMGB3P4-201ENST00000428776 AMNQ9BXJ7 453 aa14.59□□□□□ -0.07
HMGB3P4-201ENST00000428776 GLT8D2Q9H1C3 349 aa14.59□□□□□ -0.07
HMGB3P4-201ENST00000428776 GDPD2Q9HCC8 539 aa14.59□□□□□ -0.07
HMGB3P4-201ENST00000428776 NMRK2Q9NPI5 230 aa14.59□□□□□ -0.07
HMGB3P4-201ENST00000428776 POLR3EQ9NVU0 708 aa14.59□□□□□ -0.07
HMGB3P4-201ENST00000428776 RBBP6Q7Z6E9 1792 aaKnown RBP14.59□□□□□ -0.07
HMGB3P4-201ENST00000428776 MYH7BA7E2Y1 1941 aa14.58□□□□□ -0.07
HMGB3P4-201ENST00000428776 M0R2N6 131 aa14.58□□□□□ -0.08
HMGB3P4-201ENST00000428776 YEATS4O95619 227 aa14.58□□□□□ -0.08
HMGB3P4-201ENST00000428776 VCAM1P19320 739 aa14.58□□□□□ -0.08
HMGB3P4-201ENST00000428776 SH3D19Q5HYK7 790 aa14.58□□□□□ -0.08
HMGB3P4-201ENST00000428776 FBXO11Q86XK2 927 aa14.58□□□□□ -0.08
HMGB3P4-201ENST00000428776 RANBP17Q9H2T7 1088 aaKnown RBP14.58□□□□□ -0.08
HMGB3P4-201ENST00000428776 TMOD4Q9NZQ9 345 aa14.58□□□□□ -0.08
HMGB3P4-201ENST00000428776 NOL7Q9UMY1 257 aaKnown RBP14.58□□□□□ -0.08
HMGB3P4-201ENST00000428776 PCDHA1Q9Y5I3 950 aa14.58□□□□□ -0.08
HMGB3P4-201ENST00000428776 TRAK2O60296 914 aa14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 FDX1P10109 184 aa14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 NASPP49321 788 aaPredicted RBP14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 ADCY7P51828 1080 aa14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 MRPL12P52815 198 aaKnown RBP14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 HMGCS2P54868 508 aa14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 FKBP1BP68106 108 aa14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 CEBPZQ03701 1054 aaKnown RBP14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 LDLRAD1Q5T700 205 aa14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 ANO1Q5XXA6 986 aa14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 MOB2Q70IA6 237 aa14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 KIFC2Q96AC6 838 aa14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 SLF1Q9BQI6 1058 aa14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 TANGO6Q9C0B7 1094 aa14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 RPAP3Q9H6T3 665 aaPredicted RBP14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 ELP3Q9H9T3 547 aa14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 RIC8AQ9NPQ8 531 aa14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 PCDHA6Q9UN73 950 aa14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 PCDHA8Q9Y5H6 950 aa14.57□□□□□ -0.08
HMGB3P4-201ENST00000428776 SPDYE5A6NIY4 337 aa14.56□□□□□ -0.08
HMGB3P4-201ENST00000428776 TRAF5O00463 557 aa14.56□□□□□ -0.08
HMGB3P4-201ENST00000428776 MBD3O95983 291 aa14.56□□□□□ -0.08
HMGB3P4-201ENST00000428776 TRAPPC10P48553 1259 aa14.56□□□□□ -0.08
HMGB3P4-201ENST00000428776 TOB1P50616 345 aaPredicted RBP14.56□□□□□ -0.08
HMGB3P4-201ENST00000428776 UBE2HP62256 183 aa14.56□□□□□ -0.08
HMGB3P4-201ENST00000428776 KRT25Q7Z3Z0 450 aa14.56□□□□□ -0.08
HMGB3P4-201ENST00000428776 TEX2Q8IWB9 1127 aa14.56□□□□□ -0.08
HMGB3P4-201ENST00000428776 REXO1Q8N1G1 1221 aaKnown RBP14.56□□□□□ -0.08
HMGB3P4-201ENST00000428776 CUL5Q93034 780 aa14.56□□□□□ -0.08
HMGB3P4-201ENST00000428776 CLMNQ96JQ2 1002 aa14.56□□□□□ -0.08
HMGB3P4-201ENST00000428776 FBXO28Q9NVF7 368 aa14.56□□□□□ -0.08
HMGB3P4-201ENST00000428776 CLIC4Q9Y696 253 aa14.56□□□□□ -0.08
HMGB3P4-201ENST00000428776 DDX49Q9Y6V7 483 aaKnown RBP14.56□□□□□ -0.08
HMGB3P4-201ENST00000428776 CCDC194A0A1B0GVG4 234 aa14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 CXCL11O14625 94 aa14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 FLOT1O75955 427 aa14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 SNAP25P60880 206 aa14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 PPIL2Q13356 520 aa14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 DGKZQ13574 1117 aa14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 SLC39A14Q15043 492 aa14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 STK38Q15208 465 aa14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 SF3A1Q15459 793 aaKnown RBP14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 EARS2Q5JPH6 523 aaKnown RBP14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 CHADLQ6NUI6 762 aa14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 PIK3AP1Q6ZUJ8 805 aa14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 LINC00301Q8NCQ3 95 aa14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 KCNG4Q8TDN1 519 aa14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 ZNF526Q8TF50 670 aaPredicted RBP14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 FTOQ9C0B1 505 aaKnown RBP eCLIP14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 PSTPIP2Q9H939 334 aa14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 PNMA2Q9UL42 364 aa14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 PPP1R9AQ9ULJ8 1098 aa14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 CEP131Q9UPN4 1083 aa14.55□□□□□ -0.08
HMGB3P4-201ENST00000428776 GOLGA6L4A6NEF3 574 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 FAM205CA6NFA0 338 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 USP17L15C9J2P7 530 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 USP17L13C9JLJ4 530 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 USP17L11C9JVI0 530 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 USP17L18D6R9N7 530 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 USP17L22D6RA61 530 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 USP17L17D6RBQ6 530 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 USP17L19D6RCP7 530 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 USP17L20D6RJB6 530 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 ADAMTS3O15072 1205 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 SPTLC2O15270 562 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 GADD45BO75293 160 aaPredicted RBP14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 USP17L24Q0WX57 530 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 NONOQ15233 471 aaKnown RBP eCLIP14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 KLHL40Q2TBA0 621 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 MCTP2Q6DN12 878 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 CATSPERGQ6ZRH7 1159 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 JMYQ8N9B5 988 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 PROCA1Q8NCQ7 364 aaPredicted RBP14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 SLC10A4Q96EP9 437 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 OTUD5Q96G74 571 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 ZNF408Q9H9D4 720 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 KCNH4Q9UQ05 1017 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 ABCB11O95342 1321 aa14.54□□□□□ -0.08
HMGB3P4-201ENST00000428776 A0A0G2JMZ2 1700 aa14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 MYPNQ86TC9 1320 aa14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 A0A0G2JLL6 359 aaPredicted RBP14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 IRF6O14896 467 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms