RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 NUP88Q99567 741 aaPredicted RBP9.74□□□□□ -0.85
CSTF1-203ENST00000428552 NOC4LQ9BVI4 516 aaKnown RBP9.74□□□□□ -0.85
CSTF1-203ENST00000428552 SH2D4AQ9H788 454 aa9.74□□□□□ -0.85
CSTF1-203ENST00000428552 TSHZ2Q9NRE2 1034 aa9.74□□□□□ -0.85
CSTF1-203ENST00000428552 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.74□□□□□ -0.85
CSTF1-203ENST00000428552 ATP2A1O14983 1001 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 COPB2P35606 906 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 CCL23P55773 120 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 BEX3Q00994 111 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 GNASQ5JWF2 1037 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 C12orf60Q5U649 245 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 PPP2R2DQ66LE6 453 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 SNRNP48Q6IEG0 339 aaKnown RBP9.73□□□□□ -0.85
CSTF1-203ENST00000428552 C16orf86Q6ZW13 317 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 PIAS4Q8N2W9 510 aaPredicted RBP9.73□□□□□ -0.85
CSTF1-203ENST00000428552 MICALL1Q8N3F8 863 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 IL27Q8NEV9 243 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 CCDC17Q96LX7 622 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 AGBL1Q96MI9 1066 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 TEX13BQ9BXU2 312 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 HIPK3Q9H422 1215 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 ARMT1Q9H993 441 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 CD320Q9NPF0 282 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 PCDHA11Q9Y5I1 949 aa9.73□□□□□ -0.85
CSTF1-203ENST00000428552 PRRC2BQ5JSZ5 2229 aaKnown RBP9.72□□□□□ -0.85
CSTF1-203ENST00000428552 APBB1O00213 710 aa9.72□□□□□ -0.85
CSTF1-203ENST00000428552 TLR3O15455 904 aaKnown RBP9.72□□□□□ -0.85
CSTF1-203ENST00000428552 B4GALT4O60513 344 aa9.72□□□□□ -0.85
CSTF1-203ENST00000428552 TMEM63BQ5T3F8 832 aa9.72□□□□□ -0.85
CSTF1-203ENST00000428552 CXCL17Q6UXB2 119 aa9.72□□□□□ -0.85
CSTF1-203ENST00000428552 ARMCX2Q7L311 632 aa9.72□□□□□ -0.85
CSTF1-203ENST00000428552 SPRED2Q7Z698 418 aa9.72□□□□□ -0.85
CSTF1-203ENST00000428552 SPRYD3Q8NCJ5 442 aa9.72□□□□□ -0.85
CSTF1-203ENST00000428552 TRPV6Q9H1D0 765 aa9.72□□□□□ -0.85
CSTF1-203ENST00000428552 ABHD16BQ9H3Z7 469 aa9.72□□□□□ -0.85
CSTF1-203ENST00000428552 KANSL2Q9H9L4 492 aa9.72□□□□□ -0.85
CSTF1-203ENST00000428552 GNEQ9Y223 722 aaKnown RBP9.72□□□□□ -0.85
CSTF1-203ENST00000428552 DDX49Q9Y6V7 483 aaKnown RBP9.72□□□□□ -0.85
CSTF1-203ENST00000428552 ZBED9Q6R2W3 1325 aa9.72□□□□□ -0.85
CSTF1-203ENST00000428552 FAM86C2PA6NEL3 165 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 USP17L12C9JPN9 530 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 USP17L21D6R901 530 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 IPO8O15397 1037 aaKnown RBP9.71□□□□□ -0.86
CSTF1-203ENST00000428552 GPR37L1O60883 481 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 CA3P07451 260 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 VASPP50552 380 aaPredicted RBP9.71□□□□□ -0.86
CSTF1-203ENST00000428552 CNTN2Q02246 1040 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 TTLL4Q14679 1199 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 AAK1Q2M2I8 961 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 TMEM31Q5JXX7 168 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 AACSQ86V21 672 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 CCDC144CPQ8IYA2 1237 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 FRAT1Q92837 279 aaPredicted RBP9.71□□□□□ -0.86
CSTF1-203ENST00000428552 VTI1AQ96AJ9 217 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 DDX11Q96FC9 970 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 SCLYQ96I15 445 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 SLF1Q9BQI6 1058 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 TSPYL2Q9H2G4 693 aaPredicted RBP9.71□□□□□ -0.86
CSTF1-203ENST00000428552 EXOC6BQ9Y2D4 811 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 HCN4Q9Y3Q4 1203 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 SLC4A7Q9Y6M7 1214 aa9.71□□□□□ -0.86
CSTF1-203ENST00000428552 COL4A4P53420 1690 aaPredicted RBP9.71□□□□□ -0.86
CSTF1-203ENST00000428552 PIEZO1Q92508 2521 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 SOWAHBA6NEL2 793 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 GOLIM4O00461 696 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 LPXNO60711 386 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 MBD4O95243 580 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 NDUFB10O96000 172 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 RLBP1P12271 317 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 ATP2A2P16615 1042 aaKnown RBP9.7□□□□□ -0.86
CSTF1-203ENST00000428552 ADD2P35612 726 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 PSMC6P62333 389 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 ITGA7Q13683 1181 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 TTF1Q15361 905 aaPredicted RBP9.7□□□□□ -0.86
CSTF1-203ENST00000428552 CEP85Q6P2H3 762 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 CTR9Q6PD62 1173 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 FAM133AQ8N9E0 248 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 MTIF3Q9H2K0 278 aaKnown RBP9.7□□□□□ -0.86
CSTF1-203ENST00000428552 CERS4Q9HA82 394 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 SPC25Q9HBM1 224 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 SLC38A10Q9HBR0 1119 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 RAVER2Q9HCJ3 691 aaKnown RBP9.7□□□□□ -0.86
CSTF1-203ENST00000428552 GOPCQ9HD26 462 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 ATP8A2Q9NTI2 1148 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 SCN5AQ14524 2016 aa9.7□□□□□ -0.86
CSTF1-203ENST00000428552 IGKV6D-41A0A0C4DH26 115 aa9.69□□□□□ -0.86
CSTF1-203ENST00000428552 F5H6K3 240 aa9.69□□□□□ -0.86
CSTF1-203ENST00000428552 PI4K2BG5E9Z4 385 aa9.69□□□□□ -0.86
CSTF1-203ENST00000428552 LCTP09848 1927 aa9.69□□□□□ -0.86
CSTF1-203ENST00000428552 SMPD1P17405 629 aa9.69□□□□□ -0.86
CSTF1-203ENST00000428552 RASA1P20936 1047 aa9.69□□□□□ -0.86
CSTF1-203ENST00000428552 TNFAIP2Q03169 654 aa9.69□□□□□ -0.86
CSTF1-203ENST00000428552 TAP1Q03518 808 aa9.69□□□□□ -0.86
CSTF1-203ENST00000428552 KLRC3Q07444 240 aa9.69□□□□□ -0.86
CSTF1-203ENST00000428552 PTPRSQ13332 1948 aa9.69□□□□□ -0.86
CSTF1-203ENST00000428552 SKIV2LQ15477 1246 aaKnown RBP9.69□□□□□ -0.86
CSTF1-203ENST00000428552 ALYREFQ86V81 257 aaKnown RBP9.69□□□□□ -0.86
CSTF1-203ENST00000428552 CPXCR1Q8N123 301 aa9.69□□□□□ -0.86
CSTF1-203ENST00000428552 PRPF38AQ8NAV1 312 aaKnown RBP9.69□□□□□ -0.86
CSTF1-203ENST00000428552 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms