RNA–Protein interactions for RNA: ENST00000428192.6

OTUB1-203, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene OTUB1, Length 1,296 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-203ENST00000428192 HTTP42858 3142 aa23.68■■□□□ 1.38
OTUB1-203ENST00000428192 GREB1LQ9C091 1923 aaPredicted RBP23.67■■□□□ 1.38
OTUB1-203ENST00000428192 PGK2P07205 417 aa23.67■■□□□ 1.38
OTUB1-203ENST00000428192 SNHG28P0DPA3 235 aa23.67■■□□□ 1.38
OTUB1-203ENST00000428192 PDHBP11177 359 aa23.67■■□□□ 1.38
OTUB1-203ENST00000428192 AKR1A1P14550 325 aa23.67■■□□□ 1.38
OTUB1-203ENST00000428192 ZNF543Q08ER8 600 aa23.67■■□□□ 1.38
OTUB1-203ENST00000428192 ASPRV1Q53RT3 343 aa23.67■■□□□ 1.38
OTUB1-203ENST00000428192 RNF180Q86T96 592 aa23.67■■□□□ 1.38
OTUB1-203ENST00000428192 PNMA1Q8ND90 353 aa23.67■■□□□ 1.38
OTUB1-203ENST00000428192 SPC25Q9HBM1 224 aa23.67■■□□□ 1.38
OTUB1-203ENST00000428192 ADD3Q9UEY8 706 aaKnown RBP23.67■■□□□ 1.38
OTUB1-203ENST00000428192 CCPG1Q9ULG6 757 aa23.67■■□□□ 1.38
OTUB1-203ENST00000428192 RIPK3Q9Y572 518 aa23.67■■□□□ 1.38
OTUB1-203ENST00000428192 BMP2KLQ5H9B9 411 aa23.66■■□□□ 1.38
OTUB1-203ENST00000428192 NCOA7Q8NI08 942 aa23.66■■□□□ 1.38
OTUB1-203ENST00000428192 MTA3Q9BTC8 594 aa23.66■■□□□ 1.38
OTUB1-203ENST00000428192 RANBP17Q9H2T7 1088 aaKnown RBP23.66■■□□□ 1.38
OTUB1-203ENST00000428192 RNF146Q9NTX7 359 aa23.66■■□□□ 1.38
OTUB1-203ENST00000428192 MTMR7Q9Y216 660 aa23.66■■□□□ 1.38
OTUB1-203ENST00000428192 B4E1Z4 1266 aa23.65■■□□□ 1.38
OTUB1-203ENST00000428192 ALAS1P13196 640 aa23.65■■□□□ 1.38
OTUB1-203ENST00000428192 IFIT1BQ5T764 474 aaKnown RBP23.65■■□□□ 1.38
OTUB1-203ENST00000428192 TMTC2Q8N394 836 aa23.65■■□□□ 1.38
OTUB1-203ENST00000428192 MAP4K1Q92918 833 aa23.65■■□□□ 1.38
OTUB1-203ENST00000428192 CCDC136Q96JN2 1154 aa23.65■■□□□ 1.38
OTUB1-203ENST00000428192 TACC3Q9Y6A5 838 aa23.65■■□□□ 1.38
OTUB1-203ENST00000428192 ZNF236Q9UL36 1845 aa23.64■■□□□ 1.38
OTUB1-203ENST00000428192 H0YGN5 161 aa23.64■■□□□ 1.37
OTUB1-203ENST00000428192 COL6A1P12109 1028 aa23.64■■□□□ 1.37
OTUB1-203ENST00000428192 AGBL1Q96MI9 1066 aa23.64■■□□□ 1.37
OTUB1-203ENST00000428192 GPCPD1Q9NPB8 672 aa23.64■■□□□ 1.37
OTUB1-203ENST00000428192 NEDD4P46934 1319 aa23.63■■□□□ 1.37
OTUB1-203ENST00000428192 WDR19Q8NEZ3 1342 aa23.63■■□□□ 1.37
OTUB1-203ENST00000428192 A0A0G2JMZ2 1700 aa23.63■■□□□ 1.37
OTUB1-203ENST00000428192 PARP1P09874 1014 aaKnown RBP23.63■■□□□ 1.37
OTUB1-203ENST00000428192 RNF20Q5VTR2 975 aa23.63■■□□□ 1.37
OTUB1-203ENST00000428192 CCDC174Q6PII3 467 aa23.63■■□□□ 1.37
OTUB1-203ENST00000428192 RGS22Q8NE09 1264 aa23.63■■□□□ 1.37
OTUB1-203ENST00000428192 TSEN34Q9BSV6 310 aaKnown RBP23.63■■□□□ 1.37
OTUB1-203ENST00000428192 HOMER2Q9NSB8 354 aa23.63■■□□□ 1.37
OTUB1-203ENST00000428192 ZNF536O15090 1300 aa23.62■■□□□ 1.37
OTUB1-203ENST00000428192 XPNPEP3Q9NQH7 507 aa23.62■■□□□ 1.37
OTUB1-203ENST00000428192 TNKSO95271 1327 aa23.61■■□□□ 1.37
OTUB1-203ENST00000428192 PDE4DIPQ5VU43 2346 aa23.61■■□□□ 1.37
OTUB1-203ENST00000428192 DOCK3Q8IZD9 2030 aa23.61■■□□□ 1.37
OTUB1-203ENST00000428192 A0A1W2PPC1 479 aa23.61■■□□□ 1.37
OTUB1-203ENST00000428192 ACVR2BQ13705 512 aa23.61■■□□□ 1.37
OTUB1-203ENST00000428192 ERICH6BQ5W0A0 696 aa23.61■■□□□ 1.37
OTUB1-203ENST00000428192 MCF2L2Q86YR7 1114 aa23.61■■□□□ 1.37
OTUB1-203ENST00000428192 ENAHQ8N8S7 591 aaPredicted RBP23.61■■□□□ 1.37
OTUB1-203ENST00000428192 TRPV1Q8NER1 839 aa23.61■■□□□ 1.37
OTUB1-203ENST00000428192 ZKSCAN3Q9BRR0 538 aa23.61■■□□□ 1.37
OTUB1-203ENST00000428192 SENP6Q9GZR1 1112 aaPredicted RBP23.61■■□□□ 1.37
OTUB1-203ENST00000428192 PRKAG2Q9UGJ0 569 aa23.61■■□□□ 1.37
OTUB1-203ENST00000428192 DUSP11O75319 330 aaKnown RBP23.6■■□□□ 1.37
OTUB1-203ENST00000428192 SLC16A2P36021 539 aa23.6■■□□□ 1.37
OTUB1-203ENST00000428192 SAMD3Q8N6K7 520 aa23.6■■□□□ 1.37
OTUB1-203ENST00000428192 FAM133AQ8N9E0 248 aa23.6■■□□□ 1.37
OTUB1-203ENST00000428192 PCSK9Q8NBP7 692 aaKnown RBP23.6■■□□□ 1.37
OTUB1-203ENST00000428192 NUP133Q8WUM0 1156 aa23.6■■□□□ 1.37
OTUB1-203ENST00000428192 A1CFQ9NQ94 594 aaKnown RBP23.6■■□□□ 1.37
OTUB1-203ENST00000428192 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.6■■□□□ 1.37
OTUB1-203ENST00000428192 RLFQ13129 1914 aa23.6■■□□□ 1.37
OTUB1-203ENST00000428192 IFIT3O14879 490 aaKnown RBP23.59■■□□□ 1.37
OTUB1-203ENST00000428192 CYP21A2P08686 494 aa23.59■■□□□ 1.37
OTUB1-203ENST00000428192 ZNF865P0CJ78 1059 aaPredicted RBP23.59■■□□□ 1.37
OTUB1-203ENST00000428192 MNX1P50219 401 aaPredicted RBP23.59■■□□□ 1.37
OTUB1-203ENST00000428192 PRAMEF19Q5SWL8 479 aa23.59■■□□□ 1.37
OTUB1-203ENST00000428192 TTBK2Q6IQ55 1244 aa23.59■■□□□ 1.37
OTUB1-203ENST00000428192 DIS3LQ8TF46 1054 aaKnown RBP23.59■■□□□ 1.37
OTUB1-203ENST00000428192 SEZ6LQ9BYH1 1024 aa23.59■■□□□ 1.37
OTUB1-203ENST00000428192 CYP39A1Q9NYL5 469 aa23.59■■□□□ 1.37
OTUB1-203ENST00000428192 PLXNB2O15031 1838 aa23.59■■□□□ 1.37
OTUB1-203ENST00000428192 FRMPD2Q68DX3 1309 aaPredicted RBP23.59■■□□□ 1.37
OTUB1-203ENST00000428192 SNAI1O95863 264 aaPredicted RBP23.58■■□□□ 1.37
OTUB1-203ENST00000428192 C1orf53Q5VUE5 145 aa23.58■■□□□ 1.37
OTUB1-203ENST00000428192 IQSEC1Q6DN90 963 aa23.58■■□□□ 1.37
OTUB1-203ENST00000428192 NSMFQ6X4W1 530 aa23.58■■□□□ 1.37
OTUB1-203ENST00000428192 DNERQ8NFT8 737 aa23.58■■□□□ 1.37
OTUB1-203ENST00000428192 MAP3K20Q9NYL2 800 aaKnown RBP23.58■■□□□ 1.37
OTUB1-203ENST00000428192 MOXD2PA6NHM9 499 aa23.57■■□□□ 1.36
OTUB1-203ENST00000428192 E7EWF7 191 aa23.57■■□□□ 1.36
OTUB1-203ENST00000428192 DHX16O60231 1041 aaKnown RBP23.57■■□□□ 1.36
OTUB1-203ENST00000428192 PTH1RQ03431 593 aa23.57■■□□□ 1.36
OTUB1-203ENST00000428192 LRRC41Q15345 812 aa23.57■■□□□ 1.36
OTUB1-203ENST00000428192 HABP4Q5JVS0 413 aaKnown RBP23.57■■□□□ 1.36
OTUB1-203ENST00000428192 ARMCX2Q7L311 632 aa23.57■■□□□ 1.36
OTUB1-203ENST00000428192 CATIPQ7Z7H3 387 aa23.57■■□□□ 1.36
OTUB1-203ENST00000428192 MAP3K14Q99558 947 aa23.57■■□□□ 1.36
OTUB1-203ENST00000428192 ZHX1Q9UKY1 873 aaPredicted RBP23.57■■□□□ 1.36
OTUB1-203ENST00000428192 MRPL11Q9Y3B7 192 aaKnown RBP23.57■■□□□ 1.36
OTUB1-203ENST00000428192 Q9Y3F1 56 aa23.57■■□□□ 1.36
OTUB1-203ENST00000428192 ABCB11O95342 1321 aa23.57■■□□□ 1.36
OTUB1-203ENST00000428192 ZEB2O60315 1214 aa23.56■■□□□ 1.36
OTUB1-203ENST00000428192 WTAPQ15007 396 aa23.56■■□□□ 1.36
OTUB1-203ENST00000428192 RNF207Q6ZRF8 634 aa23.56■■□□□ 1.36
OTUB1-203ENST00000428192 CCDC144CPQ8IYA2 1237 aa23.56■■□□□ 1.36
OTUB1-203ENST00000428192 CHMP4CQ96CF2 233 aa23.56■■□□□ 1.36
OTUB1-203ENST00000428192 ESYT1Q9BSJ8 1104 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms