RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 AGBL1Q96MI9 1066 aa17.06■□□□□ 0.32
NCKIPSD-205ENST00000426678 ACAD9Q9H845 621 aa17.06■□□□□ 0.32
NCKIPSD-205ENST00000426678 RNF146Q9NTX7 359 aa17.06■□□□□ 0.32
NCKIPSD-205ENST00000426678 ZSWIM5Q9P217 1185 aa17.06■□□□□ 0.32
NCKIPSD-205ENST00000426678 DDX20Q9UHI6 824 aaKnown RBP17.06■□□□□ 0.32
NCKIPSD-205ENST00000426678 MKI67P46013 3256 aaKnown RBP17.06■□□□□ 0.32
NCKIPSD-205ENST00000426678 ZNF536O15090 1300 aa17.05■□□□□ 0.32
NCKIPSD-205ENST00000426678 IGHA2P01877 340 aa17.05■□□□□ 0.32
NCKIPSD-205ENST00000426678 SNHG28P0DPA3 235 aa17.05■□□□□ 0.32
NCKIPSD-205ENST00000426678 ALAS1P13196 640 aa17.05■□□□□ 0.32
NCKIPSD-205ENST00000426678 SNAP25P60880 206 aa17.05■□□□□ 0.32
NCKIPSD-205ENST00000426678 ZNF543Q08ER8 600 aa17.05■□□□□ 0.32
NCKIPSD-205ENST00000426678 GPATCH4Q5T3I0 446 aaKnown RBP17.05■□□□□ 0.32
NCKIPSD-205ENST00000426678 ENAHQ8N8S7 591 aaPredicted RBP17.05■□□□□ 0.32
NCKIPSD-205ENST00000426678 DIS3LQ8TF46 1054 aaKnown RBP17.05■□□□□ 0.32
NCKIPSD-205ENST00000426678 ANKS1AQ92625 1134 aa17.05■□□□□ 0.32
NCKIPSD-205ENST00000426678 DPF3Q92784 378 aa17.05■□□□□ 0.32
NCKIPSD-205ENST00000426678 TINF2Q9BSI4 451 aa17.05■□□□□ 0.32
NCKIPSD-205ENST00000426678 ESYT1Q9BSJ8 1104 aa17.05■□□□□ 0.32
NCKIPSD-205ENST00000426678 CCPG1Q9ULG6 757 aa17.05■□□□□ 0.32
NCKIPSD-205ENST00000426678 RBM8AQ9Y5S9 174 aaKnown RBP17.05■□□□□ 0.32
NCKIPSD-205ENST00000426678 IFIT1BQ5T764 474 aaKnown RBP17.04■□□□□ 0.32
NCKIPSD-205ENST00000426678 LHX8Q68G74 356 aa17.04■□□□□ 0.32
NCKIPSD-205ENST00000426678 CASC1Q6TDU7 716 aa17.04■□□□□ 0.32
NCKIPSD-205ENST00000426678 TRPV1Q8NER1 839 aa17.04■□□□□ 0.32
NCKIPSD-205ENST00000426678 MAP4K1Q92918 833 aa17.04■□□□□ 0.32
NCKIPSD-205ENST00000426678 RANBP17Q9H2T7 1088 aaKnown RBP17.04■□□□□ 0.32
NCKIPSD-205ENST00000426678 NRBP1Q9UHY1 535 aa17.04■□□□□ 0.32
NCKIPSD-205ENST00000426678 DNAJC25-GNG10A0A024R161 153 aa17.03■□□□□ 0.32
NCKIPSD-205ENST00000426678 SEPT4O43236 478 aa17.03■□□□□ 0.32
NCKIPSD-205ENST00000426678 ICAM1P05362 532 aa17.03■□□□□ 0.32
NCKIPSD-205ENST00000426678 MSL3Q8N5Y2 521 aaKnown RBP17.03■□□□□ 0.32
NCKIPSD-205ENST00000426678 NCOA7Q8NI08 942 aa17.03■□□□□ 0.32
NCKIPSD-205ENST00000426678 TRERF1Q96PN7 1200 aa17.03■□□□□ 0.32
NCKIPSD-205ENST00000426678 C11orf49Q9H6J7 331 aa17.03■□□□□ 0.32
NCKIPSD-205ENST00000426678 PNMA2Q9UL42 364 aa17.03■□□□□ 0.32
NCKIPSD-205ENST00000426678 CNPY2Q9Y2B0 182 aa17.03■□□□□ 0.32
NCKIPSD-205ENST00000426678 PFASO15067 1338 aa17.02■□□□□ 0.32
NCKIPSD-205ENST00000426678 ERICH2A1L162 156 aa17.02■□□□□ 0.32
NCKIPSD-205ENST00000426678 E7EWF7 191 aa17.02■□□□□ 0.32
NCKIPSD-205ENST00000426678 CENPBP07199 599 aaPredicted RBP17.02■□□□□ 0.32
NCKIPSD-205ENST00000426678 GOLGA8HP0CJ92 632 aa17.02■□□□□ 0.32
NCKIPSD-205ENST00000426678 SART3Q15020 963 aaKnown RBP17.02■□□□□ 0.32
NCKIPSD-205ENST00000426678 ASPRV1Q53RT3 343 aa17.02■□□□□ 0.32
NCKIPSD-205ENST00000426678 PRAMEF19Q5SWL8 479 aa17.02■□□□□ 0.32
NCKIPSD-205ENST00000426678 CYB5R4Q7L1T6 521 aa17.02■□□□□ 0.32
NCKIPSD-205ENST00000426678 ANO2Q9NQ90 1003 aa17.02■□□□□ 0.32
NCKIPSD-205ENST00000426678 SYNGAP1Q96PV0 1343 aa17.01■□□□□ 0.31
NCKIPSD-205ENST00000426678 POTEB2H3BUK9 544 aa17.01■□□□□ 0.31
NCKIPSD-205ENST00000426678 CDC45O75419 566 aa17.01■□□□□ 0.31
NCKIPSD-205ENST00000426678 MNX1P50219 401 aaPredicted RBP17.01■□□□□ 0.31
NCKIPSD-205ENST00000426678 ZNF467Q7Z7K2 595 aaPredicted RBP17.01■□□□□ 0.31
NCKIPSD-205ENST00000426678 LSG1Q9H089 658 aaKnown RBP17.01■□□□□ 0.31
NCKIPSD-205ENST00000426678 A1CFQ9NQ94 594 aaKnown RBP17.01■□□□□ 0.31
NCKIPSD-205ENST00000426678 IFIT3O14879 490 aaKnown RBP17■□□□□ 0.31
NCKIPSD-205ENST00000426678 PARP1P09874 1014 aaKnown RBP17■□□□□ 0.31
NCKIPSD-205ENST00000426678 SEC23AQ15436 765 aa17■□□□□ 0.31
NCKIPSD-205ENST00000426678 MUM1L1Q5H9M0 696 aa17■□□□□ 0.31
NCKIPSD-205ENST00000426678 ANO1Q5XXA6 986 aa17■□□□□ 0.31
NCKIPSD-205ENST00000426678 MAMDC4Q6UXC1 1216 aa17■□□□□ 0.31
NCKIPSD-205ENST00000426678 NSMFQ6X4W1 530 aa17■□□□□ 0.31
NCKIPSD-205ENST00000426678 STOX1Q6ZVD7 989 aa17■□□□□ 0.31
NCKIPSD-205ENST00000426678 NR2E3Q9Y5X4 410 aa17■□□□□ 0.31
NCKIPSD-205ENST00000426678 TAF6LQ9Y6J9 622 aa17■□□□□ 0.31
NCKIPSD-205ENST00000426678 WDR19Q8NEZ3 1342 aa16.99■□□□□ 0.31
NCKIPSD-205ENST00000426678 DHX16O60231 1041 aaKnown RBP16.99■□□□□ 0.31
NCKIPSD-205ENST00000426678 EVI5O60447 810 aa16.99■□□□□ 0.31
NCKIPSD-205ENST00000426678 AKR1A1P14550 325 aa16.99■□□□□ 0.31
NCKIPSD-205ENST00000426678 TAL1P17542 331 aaPredicted RBP16.99■□□□□ 0.31
NCKIPSD-205ENST00000426678 ARRDC4Q8NCT1 418 aa16.99■□□□□ 0.31
NCKIPSD-205ENST00000426678 UBA5Q9GZZ9 404 aa16.99■□□□□ 0.31
NCKIPSD-205ENST00000426678 CPVLQ9H3G5 476 aa16.99■□□□□ 0.31
NCKIPSD-205ENST00000426678 ZHX1Q9UKY1 873 aaPredicted RBP16.99■□□□□ 0.31
NCKIPSD-205ENST00000426678 KBTBD13C9JR72 458 aa16.98■□□□□ 0.31
NCKIPSD-205ENST00000426678 DNM1LO00429 736 aa16.98■□□□□ 0.31
NCKIPSD-205ENST00000426678 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
NCKIPSD-205ENST00000426678 RARBP10826 455 aa16.98■□□□□ 0.31
NCKIPSD-205ENST00000426678 CNTN2Q02246 1040 aa16.98■□□□□ 0.31
NCKIPSD-205ENST00000426678 WTAPQ15007 396 aa16.98■□□□□ 0.31
NCKIPSD-205ENST00000426678 ARMCX2Q7L311 632 aa16.98■□□□□ 0.31
NCKIPSD-205ENST00000426678 FAM133AQ8N9E0 248 aa16.98■□□□□ 0.31
NCKIPSD-205ENST00000426678 FGD4Q96M96 766 aa16.98■□□□□ 0.31
NCKIPSD-205ENST00000426678 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.98■□□□□ 0.31
NCKIPSD-205ENST00000426678 MCM3APO60318 1980 aa16.98■□□□□ 0.31
NCKIPSD-205ENST00000426678 ALPK3Q96L96 1907 aa16.98■□□□□ 0.31
NCKIPSD-205ENST00000426678 SMCHD1A6NHR9 2005 aa16.97■□□□□ 0.31
NCKIPSD-205ENST00000426678 H0YGN5 161 aa16.97■□□□□ 0.31
NCKIPSD-205ENST00000426678 SLC27A2O14975 620 aa16.97■□□□□ 0.31
NCKIPSD-205ENST00000426678 SNAI1O95863 264 aaPredicted RBP16.97■□□□□ 0.31
NCKIPSD-205ENST00000426678 ZNF865P0CJ78 1059 aaPredicted RBP16.97■□□□□ 0.31
NCKIPSD-205ENST00000426678 COL6A1P12109 1028 aa16.97■□□□□ 0.31
NCKIPSD-205ENST00000426678 CDC37Q16543 378 aaPredicted RBP16.97■□□□□ 0.31
NCKIPSD-205ENST00000426678 TMEM67Q5HYA8 995 aa16.97■□□□□ 0.31
NCKIPSD-205ENST00000426678 RNF20Q5VTR2 975 aa16.97■□□□□ 0.31
NCKIPSD-205ENST00000426678 CREB3L3Q68CJ9 461 aa16.97■□□□□ 0.31
NCKIPSD-205ENST00000426678 CHST3Q7LGC8 479 aa16.97■□□□□ 0.31
NCKIPSD-205ENST00000426678 MB21D2Q8IYB1 491 aaPredicted RBP16.97■□□□□ 0.31
NCKIPSD-205ENST00000426678 ABHD16BQ9H3Z7 469 aa16.97■□□□□ 0.31
NCKIPSD-205ENST00000426678 CYP39A1Q9NYL5 469 aa16.97■□□□□ 0.31
NCKIPSD-205ENST00000426678 MYH6P13533 1939 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms