RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 TNKSO95271 1327 aa6.73□□□□□ -1.33
HERPUD2-204ENST00000426180 GREB1LQ9C091 1923 aaPredicted RBP6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 PHIPQ8WWQ0 1821 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 CCL15-CCL14A0A0B4J2E2 113 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 A0A0G2JLL6 359 aaPredicted RBP6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 BTBD19C9JJ37 291 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 USP17L10C9JJH3 530 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 IGF2BP3O00425 579 aaKnown RBP eCLIP6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 CXCL11O14625 94 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 TTLL1O95922 423 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 ZBTB48P10074 688 aaPredicted RBP6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 SNRPBP14678 240 aaKnown RBP6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 ZKSCAN1P17029 563 aaPredicted RBP6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 CASTP20810 708 aaKnown RBP6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 GTF2A2P52657 109 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 BACE1P56817 501 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 TRDNQ13061 729 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 SNAPC2Q13487 334 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 CCL15Q16663 113 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 SH3D19Q5HYK7 790 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 GADL1Q6ZQY3 521 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 PRRT2Q7Z6L0 340 aaPredicted RBP6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 RALYLQ86SE5 291 aaKnown RBP6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 SPICE1Q8N0Z3 855 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 FAM43AQ8N2R8 423 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 IGDCC4Q8TDY8 1250 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 MKL1Q969V6 931 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 NUP88Q99567 741 aaPredicted RBP6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 TMEM47Q9BQJ4 181 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 REPIN1Q9BWE0 567 aaKnown RBP6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 C22orf23Q9BZE7 217 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 UPF3BQ9BZI7 483 aaKnown RBP6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 KIAA1683Q9H0B3 1180 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 AS3MTQ9HBK9 375 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 STX8Q9UNK0 236 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 MTMR7Q9Y216 660 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 TMX2Q9Y320 296 aa6.72□□□□□ -1.33
HERPUD2-204ENST00000426180 SH2B2O14492 632 aaPredicted RBP6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 IFIT3O14879 490 aaKnown RBP6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 RAD21O60216 631 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 DXOO77932 396 aaKnown RBP6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 NDUFB10O96000 172 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 CETPP11597 493 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 RPS6KB1P23443 525 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 MCCP23508 829 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 MCM5P33992 734 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 RBM25P49756 843 aaKnown RBP6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 INSM1Q01101 510 aaPredicted RBP6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 NOGQ13253 232 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 KRT32Q14532 448 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 TMEM67Q5HYA8 995 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 USP17L2Q6R6M4 530 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 DHX32Q7L7V1 743 aaKnown RBP6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 DGKHQ86XP1 1220 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 RAB11FIP4Q86YS3 637 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 ANKS1AQ92625 1134 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 IL17RAQ96F46 866 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 FEZ1Q99689 392 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 UBAC1Q9BSL1 405 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 MYL10Q9BUA6 226 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 R3HDMLQ9H3Y0 253 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 VCPKMTQ9H867 229 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 LY9Q9HBG7 655 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 ARHGEF10LQ9HCE6 1279 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 ATAD5Q96QE3 1844 aa6.71□□□□□ -1.34
HERPUD2-204ENST00000426180 MANSC4A6NHS7 340 aaPredicted RBP6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 C19orf81C9J6K1 198 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 F5H6K3 240 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 TERTO14746 1132 aaKnown RBP6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 WIPF1O43516 503 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 PEX10O60683 326 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 TOP1P11387 765 aaKnown RBP6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 VCAM1P19320 739 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 MAP2K2P36507 400 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 TM4SF4P48230 202 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 USP14P54578 494 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 ANAPC15P60006 121 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 USP46P62068 366 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 KLRC3Q07444 240 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 TOB2Q14106 344 aaPredicted RBP6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 WTAPQ15007 396 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 SLC35G1Q2M3R5 365 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 FAM83BQ5T0W9 1011 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 SLFN13Q68D06 897 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 TTBK2Q6IQ55 1244 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 BLOC1S2Q6QNY1 142 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 Q6ZUG5 572 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 RUFY3Q7L099 469 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 IQCA1Q86XH1 822 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 PROCA1Q8NCQ7 364 aaPredicted RBP6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 GMCL1P1Q8NEA9 526 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 HPS1Q92902 700 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 TRIM47Q96LD4 638 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 C12orf42Q96LP6 360 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 TTC14Q96N46 770 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 TBC1D32Q96NH3 1257 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 P2RX7Q99572 595 aaKnown RBP6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 TBC1D2Q9BYX2 928 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 TM6SF1Q9BZW5 370 aa6.7□□□□□ -1.34
HERPUD2-204ENST00000426180 RPAP3Q9H6T3 665 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms