RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 EXOSC10Q01780 885 aaKnown RBP13.64□□□□□ -0.23
LMO3-206ENST00000424192 TRAF1Q13077 416 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 PLS1Q14651 629 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 GRM4Q14833 912 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 TKFCQ3LXA3 575 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 ADCK5Q3MIX3 580 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 CHST3Q7LGC8 479 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 RIOX2Q8IUF8 465 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 ZNF654Q8IZM8 581 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 REPS2Q8NFH8 660 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 IL17RAQ96F46 866 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 TRIM47Q96LD4 638 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 BTBD7Q9P203 1132 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 FBXO40Q9UH90 709 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 ZNF214Q9UL59 606 aaPredicted RBP13.64□□□□□ -0.23
LMO3-206ENST00000424192 PRR12Q9ULL5 1215 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 SLC12A7Q9Y666 1083 aa13.64□□□□□ -0.23
LMO3-206ENST00000424192 FRMPD2Q68DX3 1309 aaPredicted RBP13.64□□□□□ -0.23
LMO3-206ENST00000424192 CASP8AP2Q9UKL3 1982 aa13.63□□□□□ -0.23
LMO3-206ENST00000424192 STAT3P40763 770 aa13.63□□□□□ -0.23
LMO3-206ENST00000424192 TROAPQ12815 778 aa13.63□□□□□ -0.23
LMO3-206ENST00000424192 TMEM132BQ14DG7 1078 aa13.63□□□□□ -0.23
LMO3-206ENST00000424192 PPP2R5BQ15173 497 aa13.63□□□□□ -0.23
LMO3-206ENST00000424192 FBXO46Q6PJ61 603 aaPredicted RBP13.63□□□□□ -0.23
LMO3-206ENST00000424192 PLEKHH3Q7Z736 793 aa13.63□□□□□ -0.23
LMO3-206ENST00000424192 ABRAQ8N0Z2 381 aa13.63□□□□□ -0.23
LMO3-206ENST00000424192 IL27Q8NEV9 243 aa13.63□□□□□ -0.23
LMO3-206ENST00000424192 LZTS2Q9BRK4 669 aa13.63□□□□□ -0.23
LMO3-206ENST00000424192 MOV10L1Q9BXT6 1211 aaKnown RBP13.63□□□□□ -0.23
LMO3-206ENST00000424192 RANBP17Q9H2T7 1088 aaKnown RBP13.63□□□□□ -0.23
LMO3-206ENST00000424192 GPCPD1Q9NPB8 672 aa13.63□□□□□ -0.23
LMO3-206ENST00000424192 SRRDQ9UH36 339 aa13.63□□□□□ -0.23
LMO3-206ENST00000424192 STRNO43815 780 aa13.62□□□□□ -0.23
LMO3-206ENST00000424192 IRF5Q13568 498 aa13.62□□□□□ -0.23
LMO3-206ENST00000424192 WDR78Q5VTH9 848 aa13.62□□□□□ -0.23
LMO3-206ENST00000424192 SNRNP48Q6IEG0 339 aaKnown RBP13.62□□□□□ -0.23
LMO3-206ENST00000424192 APOA5Q6Q788 366 aa13.62□□□□□ -0.23
LMO3-206ENST00000424192 RUFY3Q7L099 469 aa13.62□□□□□ -0.23
LMO3-206ENST00000424192 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.62□□□□□ -0.23
LMO3-206ENST00000424192 GPR142Q7Z601 462 aa13.62□□□□□ -0.23
LMO3-206ENST00000424192 TRMT44Q8IYL2 757 aaKnown RBP13.62□□□□□ -0.23
LMO3-206ENST00000424192 CHST13Q8NET6 341 aa13.62□□□□□ -0.23
LMO3-206ENST00000424192 BBXQ8WY36 941 aaPredicted RBP13.62□□□□□ -0.23
LMO3-206ENST00000424192 ZSWIM6Q9HCJ5 1215 aa13.62□□□□□ -0.23
LMO3-206ENST00000424192 RBM28Q9NW13 759 aaKnown RBP13.62□□□□□ -0.23
LMO3-206ENST00000424192 SLC5A4Q9NY91 659 aa13.62□□□□□ -0.23
LMO3-206ENST00000424192 COL11A1P12107 1806 aaPredicted RBP13.62□□□□□ -0.23
LMO3-206ENST00000424192 NID2Q14112 1375 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 CCDC196A0A1B0GTZ2 297 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 PALM3A6NDB9 673 aaPredicted RBP13.61□□□□□ -0.23
LMO3-206ENST00000424192 SLC15A5A6NIM6 579 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 KLRF2D3W0D1 207 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 ZBTB43O43298 467 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 DHX16O60231 1041 aaKnown RBP13.61□□□□□ -0.23
LMO3-206ENST00000424192 ICAM1P05362 532 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 ERCC3P19447 782 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 SMARCA1P28370 1054 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 RGS2P41220 211 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 ANKRD1Q15327 319 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 RASGRP2Q7LDG7 609 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 NCAPG2Q86XI2 1143 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 SLAIN1Q8ND83 568 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 RAET1EQ8TD07 263 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 NUP133Q8WUM0 1156 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 APBA2Q99767 749 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 NUDT12Q9BQG2 462 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 SPZ1Q9BXG8 430 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 AGXT2Q9BYV1 514 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 ARHGAP39Q9C0H5 1083 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 MAF1Q9H063 256 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 PORCNQ9H237 461 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 MAD2L2Q9UI95 211 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 PTPN22Q9Y2R2 807 aa13.61□□□□□ -0.23
LMO3-206ENST00000424192 KLF18A0A0U1RQI7 1052 aa13.6□□□□□ -0.23
LMO3-206ENST00000424192 GOLGA8BA8MQT2 603 aa13.6□□□□□ -0.23
LMO3-206ENST00000424192 GOLGA8HP0CJ92 632 aa13.6□□□□□ -0.23
LMO3-206ENST00000424192 FCER1AP12319 257 aa13.6□□□□□ -0.23
LMO3-206ENST00000424192 PRKCZQ05513 592 aa13.6□□□□□ -0.23
LMO3-206ENST00000424192 GRB14Q14449 540 aa13.6□□□□□ -0.23
LMO3-206ENST00000424192 KCTD2Q14681 263 aa13.6□□□□□ -0.23
LMO3-206ENST00000424192 POTEEQ6S8J3 1075 aa13.6□□□□□ -0.23
LMO3-206ENST00000424192 MICU3Q86XE3 530 aa13.6□□□□□ -0.23
LMO3-206ENST00000424192 LRRC2Q9BYS8 371 aa13.6□□□□□ -0.23
LMO3-206ENST00000424192 MCOLN1Q9GZU1 580 aa13.6□□□□□ -0.23
LMO3-206ENST00000424192 ACAD9Q9H845 621 aa13.6□□□□□ -0.23
LMO3-206ENST00000424192 CCPG1Q9ULG6 757 aa13.6□□□□□ -0.23
LMO3-206ENST00000424192 ZSWIM8A7E2V4 1837 aa13.6□□□□□ -0.23
LMO3-206ENST00000424192 PLXNB2O15031 1838 aa13.6□□□□□ -0.23
LMO3-206ENST00000424192 GOLGA8AA7E2F4 631 aa13.59□□□□□ -0.23
LMO3-206ENST00000424192 XRCC5P13010 732 aaKnown RBP13.59□□□□□ -0.23
LMO3-206ENST00000424192 PTPREP23469 700 aa13.59□□□□□ -0.23
LMO3-206ENST00000424192 SLC16A2P36021 539 aa13.59□□□□□ -0.23
LMO3-206ENST00000424192 CDC37Q16543 378 aaPredicted RBP13.59□□□□□ -0.23
LMO3-206ENST00000424192 RTN1Q16799 776 aa13.59□□□□□ -0.23
LMO3-206ENST00000424192 Q3C1V9 767 aa13.59□□□□□ -0.23
LMO3-206ENST00000424192 TTBK2Q6IQ55 1244 aa13.59□□□□□ -0.23
LMO3-206ENST00000424192 Q6ZUG5 572 aa13.59□□□□□ -0.23
LMO3-206ENST00000424192 ADGRF4Q8IZF3 695 aa13.59□□□□□ -0.23
LMO3-206ENST00000424192 CPXCR1Q8N123 301 aa13.59□□□□□ -0.23
LMO3-206ENST00000424192 PXYLP1Q8TE99 480 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms