RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 RALYLQ86SE5 291 aaKnown RBP17.34■□□□□ 0.37
FAM3A-209ENST00000421517 WDR19Q8NEZ3 1342 aa17.34■□□□□ 0.37
FAM3A-209ENST00000421517 ACAD9Q9H845 621 aa17.34■□□□□ 0.37
FAM3A-209ENST00000421517 RAVER2Q9HCJ3 691 aaKnown RBP17.34■□□□□ 0.37
FAM3A-209ENST00000421517 KIAA0100Q14667 2235 aaKnown RBP17.33■□□□□ 0.37
FAM3A-209ENST00000421517 PFASO15067 1338 aa17.33■□□□□ 0.36
FAM3A-209ENST00000421517 SYNGAP1Q96PV0 1343 aa17.33■□□□□ 0.36
FAM3A-209ENST00000421517 TFRCP02786 760 aaKnown RBP17.33■□□□□ 0.36
FAM3A-209ENST00000421517 CCDC96Q2M329 555 aa17.33■□□□□ 0.36
FAM3A-209ENST00000421517 TSGA10IPQ3SY00 556 aa17.33■□□□□ 0.36
FAM3A-209ENST00000421517 IFIT1BQ5T764 474 aaKnown RBP17.33■□□□□ 0.36
FAM3A-209ENST00000421517 LHX8Q68G74 356 aa17.33■□□□□ 0.36
FAM3A-209ENST00000421517 SAMD1Q6SPF0 538 aaPredicted RBP17.33■□□□□ 0.36
FAM3A-209ENST00000421517 CPXCR1Q8N123 301 aa17.33■□□□□ 0.36
FAM3A-209ENST00000421517 MAP3K14Q99558 947 aa17.33■□□□□ 0.36
FAM3A-209ENST00000421517 ZKSCAN3Q9BRR0 538 aa17.33■□□□□ 0.36
FAM3A-209ENST00000421517 TINF2Q9BSI4 451 aa17.33■□□□□ 0.36
FAM3A-209ENST00000421517 MKI67P46013 3256 aaKnown RBP17.32■□□□□ 0.36
FAM3A-209ENST00000421517 ERICH2A1L162 156 aa17.32■□□□□ 0.36
FAM3A-209ENST00000421517 MYCP01106 439 aaPredicted RBP17.32■□□□□ 0.36
FAM3A-209ENST00000421517 RNF20Q5VTR2 975 aa17.32■□□□□ 0.36
FAM3A-209ENST00000421517 ANKRD35Q8N283 1001 aa17.32■□□□□ 0.36
FAM3A-209ENST00000421517 TMTC2Q8N394 836 aa17.32■□□□□ 0.36
FAM3A-209ENST00000421517 DDX11Q96FC9 970 aa17.32■□□□□ 0.36
FAM3A-209ENST00000421517 HTATIP2Q9BUP3 242 aa17.32■□□□□ 0.36
FAM3A-209ENST00000421517 SEPT4O43236 478 aa17.31■□□□□ 0.36
FAM3A-209ENST00000421517 CYB5R4Q7L1T6 521 aa17.31■□□□□ 0.36
FAM3A-209ENST00000421517 MB21D2Q8IYB1 491 aaPredicted RBP17.31■□□□□ 0.36
FAM3A-209ENST00000421517 RGS22Q8NE09 1264 aa17.31■□□□□ 0.36
FAM3A-209ENST00000421517 TRERF1Q96PN7 1200 aa17.31■□□□□ 0.36
FAM3A-209ENST00000421517 DDX20Q9UHI6 824 aaKnown RBP17.31■□□□□ 0.36
FAM3A-209ENST00000421517 FARP2O94887 1054 aaPredicted RBP17.3■□□□□ 0.36
FAM3A-209ENST00000421517 CCND3P30281 292 aaPredicted RBP17.3■□□□□ 0.36
FAM3A-209ENST00000421517 CYP2C19P33261 490 aa17.3■□□□□ 0.36
FAM3A-209ENST00000421517 PRPF38BQ5VTL8 546 aaKnown RBP17.3■□□□□ 0.36
FAM3A-209ENST00000421517 TTBK2Q6IQ55 1244 aa17.3■□□□□ 0.36
FAM3A-209ENST00000421517 NECAB2Q7Z6G3 386 aa17.3■□□□□ 0.36
FAM3A-209ENST00000421517 FAM133AQ8N9E0 248 aa17.3■□□□□ 0.36
FAM3A-209ENST00000421517 TMEM87BQ96K49 555 aa17.3■□□□□ 0.36
FAM3A-209ENST00000421517 AGBL1Q96MI9 1066 aa17.3■□□□□ 0.36
FAM3A-209ENST00000421517 ANO2Q9NQ90 1003 aa17.3■□□□□ 0.36
FAM3A-209ENST00000421517 RNF146Q9NTX7 359 aa17.3■□□□□ 0.36
FAM3A-209ENST00000421517 ISY1Q9ULR0 285 aaKnown RBP17.3■□□□□ 0.36
FAM3A-209ENST00000421517 SLC27A2O14975 620 aa17.29■□□□□ 0.36
FAM3A-209ENST00000421517 PARP1P09874 1014 aaKnown RBP17.29■□□□□ 0.36
FAM3A-209ENST00000421517 MCM5P33992 734 aa17.29■□□□□ 0.36
FAM3A-209ENST00000421517 CREB3L3Q68CJ9 461 aa17.29■□□□□ 0.36
FAM3A-209ENST00000421517 STOX1Q6ZVD7 989 aa17.29■□□□□ 0.36
FAM3A-209ENST00000421517 IGDCC4Q8TDY8 1250 aa17.29■□□□□ 0.36
FAM3A-209ENST00000421517 GPCPD1Q9NPB8 672 aa17.29■□□□□ 0.36
FAM3A-209ENST00000421517 A1CFQ9NQ94 594 aaKnown RBP17.29■□□□□ 0.36
FAM3A-209ENST00000421517 CCPG1Q9ULG6 757 aa17.29■□□□□ 0.36
FAM3A-209ENST00000421517 FRMPD2Q68DX3 1309 aaPredicted RBP17.28■□□□□ 0.36
FAM3A-209ENST00000421517 PALM3A6NDB9 673 aaPredicted RBP17.28■□□□□ 0.36
FAM3A-209ENST00000421517 IFIT3O14879 490 aaKnown RBP17.28■□□□□ 0.36
FAM3A-209ENST00000421517 PGK2P07205 417 aa17.28■□□□□ 0.36
FAM3A-209ENST00000421517 SMARCA1P28370 1054 aa17.28■□□□□ 0.36
FAM3A-209ENST00000421517 SLC16A2P36021 539 aa17.28■□□□□ 0.36
FAM3A-209ENST00000421517 LIFRP42702 1097 aa17.28■□□□□ 0.36
FAM3A-209ENST00000421517 MNX1P50219 401 aaPredicted RBP17.28■□□□□ 0.36
FAM3A-209ENST00000421517 TROAPQ12815 778 aa17.28■□□□□ 0.36
FAM3A-209ENST00000421517 TRAF1Q13077 416 aa17.28■□□□□ 0.36
FAM3A-209ENST00000421517 WTAPQ15007 396 aa17.28■□□□□ 0.36
FAM3A-209ENST00000421517 RASGRP2Q7LDG7 609 aa17.28■□□□□ 0.36
FAM3A-209ENST00000421517 SAMD3Q8N6K7 520 aa17.28■□□□□ 0.36
FAM3A-209ENST00000421517 ABHD16BQ9H3Z7 469 aa17.28■□□□□ 0.36
FAM3A-209ENST00000421517 CNPY2Q9Y2B0 182 aa17.28■□□□□ 0.36
FAM3A-209ENST00000421517 ASB14A6NK59 587 aa17.27■□□□□ 0.36
FAM3A-209ENST00000421517 COL6A1P12109 1028 aa17.27■□□□□ 0.36
FAM3A-209ENST00000421517 ALAS1P13196 640 aa17.27■□□□□ 0.36
FAM3A-209ENST00000421517 KRT32Q14532 448 aa17.27■□□□□ 0.36
FAM3A-209ENST00000421517 ARRDC4Q8NCT1 418 aa17.27■□□□□ 0.36
FAM3A-209ENST00000421517 TRPV1Q8NER1 839 aa17.27■□□□□ 0.36
FAM3A-209ENST00000421517 KCNB2Q92953 911 aa17.27■□□□□ 0.36
FAM3A-209ENST00000421517 MTMR8Q96EF0 704 aa17.27■□□□□ 0.36
FAM3A-209ENST00000421517 MAP3K20Q9NYL2 800 aaKnown RBP17.27■□□□□ 0.36
FAM3A-209ENST00000421517 CYP39A1Q9NYL5 469 aa17.27■□□□□ 0.36
FAM3A-209ENST00000421517 ZNFX1Q9P2E3 1918 aaKnown RBP17.27■□□□□ 0.35
FAM3A-209ENST00000421517 POTEB2H3BUK9 544 aa17.26■□□□□ 0.35
FAM3A-209ENST00000421517 DNM1LO00429 736 aa17.26■□□□□ 0.35
FAM3A-209ENST00000421517 ZNF865P0CJ78 1059 aaPredicted RBP17.26■□□□□ 0.35
FAM3A-209ENST00000421517 AKR1A1P14550 325 aa17.26■□□□□ 0.35
FAM3A-209ENST00000421517 ANTXR2P58335 489 aa17.26■□□□□ 0.35
FAM3A-209ENST00000421517 CCDC174Q6PII3 467 aa17.26■□□□□ 0.35
FAM3A-209ENST00000421517 ADGRF4Q8IZF3 695 aa17.26■□□□□ 0.35
FAM3A-209ENST00000421517 MORC4Q8TE76 937 aa17.26■□□□□ 0.35
FAM3A-209ENST00000421517 FGD4Q96M96 766 aa17.26■□□□□ 0.35
FAM3A-209ENST00000421517 ADD3Q9UEY8 706 aaKnown RBP17.26■□□□□ 0.35
FAM3A-209ENST00000421517 MAD2L2Q9UI95 211 aa17.26■□□□□ 0.35
FAM3A-209ENST00000421517 MTMR7Q9Y216 660 aa17.26■□□□□ 0.35
FAM3A-209ENST00000421517 TAF6LQ9Y6J9 622 aa17.26■□□□□ 0.35
FAM3A-209ENST00000421517 ABCB11O95342 1321 aa17.25■□□□□ 0.35
FAM3A-209ENST00000421517 DDAH1O94760 285 aa17.25■□□□□ 0.35
FAM3A-209ENST00000421517 REC8O95072 547 aa17.25■□□□□ 0.35
FAM3A-209ENST00000421517 SNAI1O95863 264 aaPredicted RBP17.25■□□□□ 0.35
FAM3A-209ENST00000421517 HMGB1P09429 215 aaKnown RBP17.25■□□□□ 0.35
FAM3A-209ENST00000421517 GHRHRQ02643 423 aa17.25■□□□□ 0.35
FAM3A-209ENST00000421517 GRM4Q14833 912 aa17.25■□□□□ 0.35
FAM3A-209ENST00000421517 TMEM67Q5HYA8 995 aa17.25■□□□□ 0.35
FAM3A-209ENST00000421517 CATIPQ7Z7H3 387 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms