RNA–Protein interactions for RNA: ENST00000420162.6

CDRT15-201, CMT1A duplicated region transcript 15, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDRT15, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-201ENST00000420162 TSKSQ9UJT2 592 aa17.56■□□□□ 0.4
CDRT15-201ENST00000420162 ZNF214Q9UL59 606 aaPredicted RBP17.56■□□□□ 0.4
CDRT15-201ENST00000420162 A0A0G2JMZ2 1700 aa17.55■□□□□ 0.4
CDRT15-201ENST00000420162 CYTH3O43739 400 aa17.55■□□□□ 0.4
CDRT15-201ENST00000420162 PLEKHA8P1O95397 391 aa17.55■□□□□ 0.4
CDRT15-201ENST00000420162 ICAM1P05362 532 aa17.55■□□□□ 0.4
CDRT15-201ENST00000420162 LACTBP83111 547 aaPredicted RBP17.55■□□□□ 0.4
CDRT15-201ENST00000420162 TRAF1Q13077 416 aa17.55■□□□□ 0.4
CDRT15-201ENST00000420162 ARHGEF6Q15052 776 aa17.55■□□□□ 0.4
CDRT15-201ENST00000420162 CDC37Q16543 378 aaPredicted RBP17.55■□□□□ 0.4
CDRT15-201ENST00000420162 CPLX2Q6PUV4 134 aaKnown RBP17.55■□□□□ 0.4
CDRT15-201ENST00000420162 NOL8Q76FK4 1167 aaKnown RBP17.55■□□□□ 0.4
CDRT15-201ENST00000420162 NBPF11Q86T75 865 aa17.55■□□□□ 0.4
CDRT15-201ENST00000420162 RIOX2Q8IUF8 465 aa17.55■□□□□ 0.4
CDRT15-201ENST00000420162 CPXCR1Q8N123 301 aa17.55■□□□□ 0.4
CDRT15-201ENST00000420162 RRP36Q96EU6 259 aaKnown RBP17.55■□□□□ 0.4
CDRT15-201ENST00000420162 ERO1AQ96HE7 468 aa17.55■□□□□ 0.4
CDRT15-201ENST00000420162 MOV10L1Q9BXT6 1211 aaKnown RBP17.55■□□□□ 0.4
CDRT15-201ENST00000420162 MROH8Q9H579 483 aa17.55■□□□□ 0.4
CDRT15-201ENST00000420162 RAVER2Q9HCJ3 691 aaKnown RBP17.55■□□□□ 0.4
CDRT15-201ENST00000420162 SH2B1Q9NRF2 756 aaPredicted RBP17.55■□□□□ 0.4
CDRT15-201ENST00000420162 COL11A1P12107 1806 aaPredicted RBP17.54■□□□□ 0.4
CDRT15-201ENST00000420162 ZNF536O15090 1300 aa17.54■□□□□ 0.4
CDRT15-201ENST00000420162 PNMA6FA0A0J9YX94 578 aa17.54■□□□□ 0.4
CDRT15-201ENST00000420162 CPLX1O14810 134 aa17.54■□□□□ 0.4
CDRT15-201ENST00000420162 ZBTB5O15062 677 aa17.54■□□□□ 0.4
CDRT15-201ENST00000420162 PEX10O60683 326 aa17.54■□□□□ 0.4
CDRT15-201ENST00000420162 HSPA8P11142 646 aaKnown RBP17.54■□□□□ 0.4
CDRT15-201ENST00000420162 MAPK4P31152 587 aa17.54■□□□□ 0.4
CDRT15-201ENST00000420162 SNAP25P60880 206 aa17.54■□□□□ 0.4
CDRT15-201ENST00000420162 STK3Q13188 491 aa17.54■□□□□ 0.4
CDRT15-201ENST00000420162 ME3Q16798 604 aa17.54■□□□□ 0.4
CDRT15-201ENST00000420162 SLC35G1Q2M3R5 365 aa17.54■□□□□ 0.4
CDRT15-201ENST00000420162 TKFCQ3LXA3 575 aa17.54■□□□□ 0.4
CDRT15-201ENST00000420162 SNRNP48Q6IEG0 339 aaKnown RBP17.54■□□□□ 0.4
CDRT15-201ENST00000420162 CCDC174Q6PII3 467 aa17.54■□□□□ 0.4
CDRT15-201ENST00000420162 ZNF296Q8WUU4 475 aaPredicted RBP17.54■□□□□ 0.4
CDRT15-201ENST00000420162 RBM27Q9P2N5 1060 aaKnown RBP17.54■□□□□ 0.4
CDRT15-201ENST00000420162 SEC63Q9UGP8 760 aaKnown RBP17.54■□□□□ 0.4
CDRT15-201ENST00000420162 CDKL5O76039 1030 aa17.53■□□□□ 0.4
CDRT15-201ENST00000420162 IFNAR1P17181 557 aa17.53■□□□□ 0.4
CDRT15-201ENST00000420162 FCGRTP55899 365 aa17.53■□□□□ 0.4
CDRT15-201ENST00000420162 FUT2Q10981 343 aa17.53■□□□□ 0.4
CDRT15-201ENST00000420162 QRICH1Q2TAL8 776 aa17.53■□□□□ 0.4
CDRT15-201ENST00000420162 FBXO11Q86XK2 927 aa17.53■□□□□ 0.4
CDRT15-201ENST00000420162 CMTR1Q8N1G2 835 aaKnown RBP17.53■□□□□ 0.4
CDRT15-201ENST00000420162 CCDC82Q8N4S0 544 aa17.53■□□□□ 0.4
CDRT15-201ENST00000420162 AGBL1Q96MI9 1066 aa17.53■□□□□ 0.4
CDRT15-201ENST00000420162 PIGSQ96S52 555 aa17.53■□□□□ 0.4
CDRT15-201ENST00000420162 AMNQ9BXJ7 453 aa17.53■□□□□ 0.4
CDRT15-201ENST00000420162 NCOA5Q9HCD5 579 aaKnown RBP17.53■□□□□ 0.4
CDRT15-201ENST00000420162 CCPG1Q9ULG6 757 aa17.53■□□□□ 0.4
CDRT15-201ENST00000420162 GNRH1P01148 92 aa17.52■□□□□ 0.4
CDRT15-201ENST00000420162 ERCC3P19447 782 aa17.52■□□□□ 0.4
CDRT15-201ENST00000420162 PSMC4P43686 418 aa17.52■□□□□ 0.4
CDRT15-201ENST00000420162 SCRN1Q12765 414 aa17.52■□□□□ 0.4
CDRT15-201ENST00000420162 NTRK3Q16288 839 aa17.52■□□□□ 0.4
CDRT15-201ENST00000420162 NCAPG2Q86XI2 1143 aa17.52■□□□□ 0.4
CDRT15-201ENST00000420162 HOMER1Q86YM7 354 aa17.52■□□□□ 0.4
CDRT15-201ENST00000420162 CHST13Q8NET6 341 aa17.52■□□□□ 0.4
CDRT15-201ENST00000420162 GTF3C6Q969F1 213 aa17.52■□□□□ 0.4
CDRT15-201ENST00000420162 PORCNQ9H237 461 aa17.52■□□□□ 0.4
CDRT15-201ENST00000420162 CWC22Q9HCG8 908 aaKnown RBP17.52■□□□□ 0.4
CDRT15-201ENST00000420162 FBXO40Q9UH90 709 aa17.52■□□□□ 0.4
CDRT15-201ENST00000420162 V9GY48 417 aaPredicted RBP17.52■□□□□ 0.4
CDRT15-201ENST00000420162 MYH6P13533 1939 aa17.52■□□□□ 0.4
CDRT15-201ENST00000420162 STRNO43815 780 aa17.51■□□□□ 0.39
CDRT15-201ENST00000420162 FMNL1O95466 1100 aaPredicted RBP17.51■□□□□ 0.39
CDRT15-201ENST00000420162 SLC4A3P48751 1232 aa17.51■□□□□ 0.39
CDRT15-201ENST00000420162 LBX1P52954 281 aa17.51■□□□□ 0.39
CDRT15-201ENST00000420162 AKAP17AQ02040 695 aaKnown RBP17.51■□□□□ 0.39
CDRT15-201ENST00000420162 TRIM22Q8IYM9 498 aa17.51■□□□□ 0.39
CDRT15-201ENST00000420162 COA7Q96BR5 231 aa17.51■□□□□ 0.39
CDRT15-201ENST00000420162 EFCC1Q9HA90 598 aa17.51■□□□□ 0.39
CDRT15-201ENST00000420162 ABCB11O95342 1321 aa17.5■□□□□ 0.39
CDRT15-201ENST00000420162 CNTNAP5Q8WYK1 1306 aa17.5■□□□□ 0.39
CDRT15-201ENST00000420162 TNPO2O14787 897 aaKnown RBP17.5■□□□□ 0.39
CDRT15-201ENST00000420162 PRPF3O43395 683 aaKnown RBP17.5■□□□□ 0.39
CDRT15-201ENST00000420162 LARGE1O95461 756 aa17.5■□□□□ 0.39
CDRT15-201ENST00000420162 ALAS1P13196 640 aa17.5■□□□□ 0.39
CDRT15-201ENST00000420162 HOXD10P28358 340 aa17.5■□□□□ 0.39
CDRT15-201ENST00000420162 SSRP1Q08945 709 aaKnown RBP17.5■□□□□ 0.39
CDRT15-201ENST00000420162 WDR78Q5VTH9 848 aa17.5■□□□□ 0.39
CDRT15-201ENST00000420162 PLEKHH3Q7Z736 793 aa17.5■□□□□ 0.39
CDRT15-201ENST00000420162 NECAB1Q8N987 351 aa17.5■□□□□ 0.39
CDRT15-201ENST00000420162 CD99L2Q8TCZ2 262 aa17.5■□□□□ 0.39
CDRT15-201ENST00000420162 PIBF1Q8WXW3 757 aa17.5■□□□□ 0.39
CDRT15-201ENST00000420162 TRERF1Q96PN7 1200 aa17.5■□□□□ 0.39
CDRT15-201ENST00000420162 RNF26Q9BY78 433 aaPredicted RBP17.5■□□□□ 0.39
CDRT15-201ENST00000420162 MAF1Q9H063 256 aa17.5■□□□□ 0.39
CDRT15-201ENST00000420162 RIPK3Q9Y572 518 aa17.5■□□□□ 0.39
CDRT15-201ENST00000420162 PCDHA1Q9Y5I3 950 aa17.5■□□□□ 0.39
CDRT15-201ENST00000420162 IVNS1ABPQ9Y6Y0 642 aa17.5■□□□□ 0.39
CDRT15-201ENST00000420162 FCER1AP12319 257 aa17.49■□□□□ 0.39
CDRT15-201ENST00000420162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.49■□□□□ 0.39
CDRT15-201ENST00000420162 GPR142Q7Z601 462 aa17.49■□□□□ 0.39
CDRT15-201ENST00000420162 ABRAQ8N0Z2 381 aa17.49■□□□□ 0.39
CDRT15-201ENST00000420162 TRIM47Q96LD4 638 aa17.49■□□□□ 0.39
CDRT15-201ENST00000420162 ACAD9Q9H845 621 aa17.49■□□□□ 0.39
CDRT15-201ENST00000420162 RNF146Q9NTX7 359 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms