RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 TNFRSF12AQ9NP84 129 aa5.54□□□□□ -1.52
SDCBPP3-201ENST00000419629 COPRSQ9NQ92 184 aa5.54□□□□□ -1.52
SDCBPP3-201ENST00000419629 IRS2Q9Y4H2 1338 aa5.53□□□□□ -1.52
SDCBPP3-201ENST00000419629 ZC3H12DA2A288 527 aaKnown RBP5.53□□□□□ -1.52
SDCBPP3-201ENST00000419629 NUDT19A8MXV4 375 aa5.53□□□□□ -1.52
SDCBPP3-201ENST00000419629 CLEC3AO75596 197 aa5.53□□□□□ -1.52
SDCBPP3-201ENST00000419629 ADRB1P08588 477 aa5.53□□□□□ -1.52
SDCBPP3-201ENST00000419629 ENDOUP21128 410 aaKnown RBP5.53□□□□□ -1.52
SDCBPP3-201ENST00000419629 IGFBP6P24592 240 aaPredicted RBP5.53□□□□□ -1.52
SDCBPP3-201ENST00000419629 BMP8BP34820 402 aa5.53□□□□□ -1.52
SDCBPP3-201ENST00000419629 CCNFP41002 786 aa5.53□□□□□ -1.52
SDCBPP3-201ENST00000419629 CRKP46108 304 aa5.53□□□□□ -1.52
SDCBPP3-201ENST00000419629 NCKAP1LP55160 1127 aa5.53□□□□□ -1.52
SDCBPP3-201ENST00000419629 TAGLNQ01995 201 aaKnown RBP5.53□□□□□ -1.52
SDCBPP3-201ENST00000419629 RPTNQ6XPR3 784 aa5.53□□□□□ -1.52
SDCBPP3-201ENST00000419629 TMEM192Q8IY95 271 aa5.53□□□□□ -1.52
SDCBPP3-201ENST00000419629 FFAR3O14843 346 aa5.52□□□□□ -1.53
SDCBPP3-201ENST00000419629 BUB1BO60566 1050 aaPredicted RBP5.52□□□□□ -1.53
SDCBPP3-201ENST00000419629 VAV1P15498 845 aa5.52□□□□□ -1.53
SDCBPP3-201ENST00000419629 NLRC3Q7RTR2 1065 aa5.52□□□□□ -1.53
SDCBPP3-201ENST00000419629 NUP43Q8NFH3 380 aa5.52□□□□□ -1.53
SDCBPP3-201ENST00000419629 JMJD8Q96S16 334 aa5.52□□□□□ -1.53
SDCBPP3-201ENST00000419629 CDADC1Q9BWV3 514 aa5.52□□□□□ -1.53
SDCBPP3-201ENST00000419629 GFOD1Q9NXC2 390 aa5.52□□□□□ -1.53
SDCBPP3-201ENST00000419629 IMPACTQ9P2X3 320 aa5.52□□□□□ -1.53
SDCBPP3-201ENST00000419629 SUPT16HQ9Y5B9 1047 aaKnown RBP5.52□□□□□ -1.53
SDCBPP3-201ENST00000419629 MEIS1O00470 390 aa5.51□□□□□ -1.53
SDCBPP3-201ENST00000419629 EIF4A3P38919 411 aaKnown RBP5.51□□□□□ -1.53
SDCBPP3-201ENST00000419629 CAP1Q01518 475 aa5.51□□□□□ -1.53
SDCBPP3-201ENST00000419629 CLCQ05315 142 aa5.51□□□□□ -1.53
SDCBPP3-201ENST00000419629 EFEMP1Q12805 493 aa5.51□□□□□ -1.53
SDCBPP3-201ENST00000419629 AP5S1Q9NUS5 200 aa5.51□□□□□ -1.53
SDCBPP3-201ENST00000419629 PRICKLE3O43900 615 aaPredicted RBP5.5□□□□□ -1.53
SDCBPP3-201ENST00000419629 MSL3P1P0C860 447 aa5.5□□□□□ -1.53
SDCBPP3-201ENST00000419629 MAPKAPK2P49137 400 aa5.5□□□□□ -1.53
SDCBPP3-201ENST00000419629 MVKQ03426 396 aa5.5□□□□□ -1.53
SDCBPP3-201ENST00000419629 AUHQ13825 339 aaKnown RBP5.5□□□□□ -1.53
SDCBPP3-201ENST00000419629 PLEKHN1Q494U1 663 aaPredicted RBP5.5□□□□□ -1.53
SDCBPP3-201ENST00000419629 RTP2Q5QGT7 225 aa5.5□□□□□ -1.53
SDCBPP3-201ENST00000419629 REXO1Q8N1G1 1221 aaKnown RBP5.5□□□□□ -1.53
SDCBPP3-201ENST00000419629 ZNF296Q8WUU4 475 aaPredicted RBP5.5□□□□□ -1.53
SDCBPP3-201ENST00000419629 BORCS6Q96GS4 357 aa5.5□□□□□ -1.53
SDCBPP3-201ENST00000419629 ANTXR1Q9H6X2 564 aa5.5□□□□□ -1.53
SDCBPP3-201ENST00000419629 PODXL2Q9NZ53 605 aa5.5□□□□□ -1.53
SDCBPP3-201ENST00000419629 NME1P15531 152 aaKnown RBP5.49□□□□□ -1.53
SDCBPP3-201ENST00000419629 SLURP1P55000 103 aa5.49□□□□□ -1.53
SDCBPP3-201ENST00000419629 PLP2Q04941 152 aa5.49□□□□□ -1.53
SDCBPP3-201ENST00000419629 MRPL58Q14197 206 aaKnown RBP5.49□□□□□ -1.53
SDCBPP3-201ENST00000419629 NR1I3Q14994 352 aa5.49□□□□□ -1.53
SDCBPP3-201ENST00000419629 SPATS1Q496A3 300 aa5.49□□□□□ -1.53
SDCBPP3-201ENST00000419629 CRTC3Q6UUV7 619 aa5.49□□□□□ -1.53
SDCBPP3-201ENST00000419629 SLC6A18Q96N87 628 aa5.49□□□□□ -1.53
SDCBPP3-201ENST00000419629 MKRN2Q9H000 416 aaKnown RBP5.49□□□□□ -1.53
SDCBPP3-201ENST00000419629 PRR13Q9NZ81 148 aa5.49□□□□□ -1.53
SDCBPP3-201ENST00000419629 ADAMTS1Q9UHI8 967 aa5.49□□□□□ -1.53
SDCBPP3-201ENST00000419629 FBXL21Q9UKT6 434 aa5.49□□□□□ -1.53
SDCBPP3-201ENST00000419629 PCDHB12Q9Y5F1 795 aa5.49□□□□□ -1.53
SDCBPP3-201ENST00000419629 A0A1W2PQ27 194 aa5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 A0A1W2PQ64 194 aa5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 A0A1W2PQC6 194 aa5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 A0A1W2PQD8 194 aa5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 TNFRSF10CO14798 259 aa5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 FBLN1P23142 703 aa5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 LIMS1P48059 325 aa5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 KCNC1P48547 511 aa5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 ZNF200P98182 395 aaPredicted RBP5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 RTP5Q14D33 572 aa5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 SEZ6Q53EL9 994 aa5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 ZC3H14Q6PJT7 736 aaKnown RBP5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 GK5Q6ZS86 529 aa5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 RGS22Q8NE09 1264 aa5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 EAF1Q96JC9 268 aaPredicted RBP5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 SLC9A7Q96T83 725 aa5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 BDH2Q9BUT1 245 aa5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 UBP1Q9NZI7 540 aa5.48□□□□□ -1.53
SDCBPP3-201ENST00000419629 MEIS3P2A8K0S8 358 aa5.47□□□□□ -1.53
SDCBPP3-201ENST00000419629 SHOXO15266 292 aa5.47□□□□□ -1.53
SDCBPP3-201ENST00000419629 GSNP06396 782 aa5.47□□□□□ -1.53
SDCBPP3-201ENST00000419629 PFKLP17858 780 aa5.47□□□□□ -1.53
SDCBPP3-201ENST00000419629 VAMP1P23763 118 aa5.47□□□□□ -1.53
SDCBPP3-201ENST00000419629 ZXDCQ2QGD7 858 aaPredicted RBP5.47□□□□□ -1.53
SDCBPP3-201ENST00000419629 LRRFIP1Q32MZ4 808 aaKnown RBP5.47□□□□□ -1.53
SDCBPP3-201ENST00000419629 VWA3BQ502W6 1294 aa5.47□□□□□ -1.53
SDCBPP3-201ENST00000419629 ZFYVE27Q5T4F4 411 aa5.47□□□□□ -1.53
SDCBPP3-201ENST00000419629 HS2ST1Q7LGA3 356 aa5.47□□□□□ -1.53
SDCBPP3-201ENST00000419629 NLGN1Q8N2Q7 840 aa5.47□□□□□ -1.53
SDCBPP3-201ENST00000419629 TMEM87AQ8NBN3 555 aa5.47□□□□□ -1.53
SDCBPP3-201ENST00000419629 SLC12A9Q9BXP2 914 aa5.47□□□□□ -1.53
SDCBPP3-201ENST00000419629 PLA2G1BP04054 148 aaKnown RBP5.46□□□□□ -1.54
SDCBPP3-201ENST00000419629 TARBP2Q15633 366 aaKnown RBP5.46□□□□□ -1.54
SDCBPP3-201ENST00000419629 PAQR3Q6TCH7 311 aa5.46□□□□□ -1.54
SDCBPP3-201ENST00000419629 C7orf61Q8IZ16 206 aa5.46□□□□□ -1.54
SDCBPP3-201ENST00000419629 ADGRG2Q8IZP9 1017 aa5.46□□□□□ -1.54
SDCBPP3-201ENST00000419629 NAT16Q8N8M0 369 aa5.46□□□□□ -1.54
SDCBPP3-201ENST00000419629 FNIP1Q8TF40 1166 aa5.46□□□□□ -1.54
SDCBPP3-201ENST00000419629 PLA2G2DQ9UNK4 145 aa5.46□□□□□ -1.54
SDCBPP3-201ENST00000419629 HCFC2Q9Y5Z7 792 aa5.46□□□□□ -1.54
SDCBPP3-201ENST00000419629 A0A1B0GTL3 188 aa5.45□□□□□ -1.54
SDCBPP3-201ENST00000419629 A0A1W2PQJ5 194 aa5.45□□□□□ -1.54
SDCBPP3-201ENST00000419629 C9IYK1 514 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms