RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 CYP26C1Q6V0L0 522 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 UBL4BQ8N7F7 174 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 CCDC26Q8TAB7 109 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 GOLGA5Q8TBA6 731 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 NSMCE1Q8WV22 266 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 GTF3C6Q969F1 213 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 EDC3Q96F86 508 aaKnown RBP9.36□□□□□ -0.91
UBR4-206ENST00000419533 PAIP2Q9BPZ3 127 aaKnown RBP9.36□□□□□ -0.91
UBR4-206ENST00000419533 LZTFL1Q9NQ48 299 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 ZBTB24O43167 697 aaPredicted RBP9.36□□□□□ -0.91
UBR4-206ENST00000419533 ASPRV1Q53RT3 343 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 NEK8Q86SG6 692 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 IQCDQ96DY2 449 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 PPP1R9BQ96SB3 815 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 DBNDD1Q9H9R9 158 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 TBC1D7Q9P0N9 293 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 NLRP12P59046 1061 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 SLC9C1Q4G0N8 1177 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 CAPZA3Q96KX2 299 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 ARFGAP3Q9NP61 516 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 A0A0D9SFI3 127 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 GYS1P13807 737 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 CD19P15391 556 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 TNNI1P19237 187 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 GTF2F1P35269 517 aaKnown RBP eCLIP9.36□□□□□ -0.91
UBR4-206ENST00000419533 KARSQ15046 597 aaKnown RBP9.36□□□□□ -0.91
UBR4-206ENST00000419533 XKR9Q5GH70 373 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 PODNQ7Z5L7 613 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 PLA2G4DQ86XP0 818 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 SMAP1Q8IYB5 467 aaPredicted RBP9.36□□□□□ -0.91
UBR4-206ENST00000419533 GPR161Q8N6U8 529 aaKnown RBP9.36□□□□□ -0.91
UBR4-206ENST00000419533 PROCA1Q8NCQ7 364 aaPredicted RBP9.36□□□□□ -0.91
UBR4-206ENST00000419533 HACL1Q9UJ83 578 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 MAPK8IP1Q9UQF2 711 aa9.36□□□□□ -0.91
UBR4-206ENST00000419533 RAD17O75943 681 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 IREB2P48200 963 aaKnown RBP9.35□□□□□ -0.91
UBR4-206ENST00000419533 YARSP54577 528 aaKnown RBP9.35□□□□□ -0.91
UBR4-206ENST00000419533 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.35□□□□□ -0.91
UBR4-206ENST00000419533 NELFCDQ8IXH7 590 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 CEP63Q96MT8 703 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 FAM193BQ96PV7 902 aaPredicted RBP9.35□□□□□ -0.91
UBR4-206ENST00000419533 AMNQ9BXJ7 453 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 PCDHA12Q9UN75 941 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 ZEB2O60315 1214 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 TTLL1O95922 423 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 GPBP1Q86WP2 473 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 ZNF830Q96NB3 372 aaPredicted RBP9.35□□□□□ -0.91
UBR4-206ENST00000419533 NUCKS1Q9H1E3 243 aaKnown RBP9.35□□□□□ -0.91
UBR4-206ENST00000419533 DDX25Q9UHL0 483 aaKnown RBP9.35□□□□□ -0.91
UBR4-206ENST00000419533 FGAP02671 866 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 TUBBP07437 444 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 LIG4P49917 911 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 VAV2P52735 878 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 TRIM28Q13263 835 aaKnown RBP9.35□□□□□ -0.91
UBR4-206ENST00000419533 KMT5BQ4FZB7 885 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 DCUN1D2Q6PH85 259 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 NELFBQ8WX92 580 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 PUS3Q9BZE2 481 aaKnown RBP9.35□□□□□ -0.91
UBR4-206ENST00000419533 ADD3Q9UEY8 706 aaKnown RBP9.35□□□□□ -0.91
UBR4-206ENST00000419533 CCDC84Q86UT8 332 aaPredicted RBP9.35□□□□□ -0.91
UBR4-206ENST00000419533 NOSTRINQ8IVI9 506 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 KANSL2Q9H9L4 492 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 ODF2LQ9ULJ1 636 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 STRCQ7RTU9 1775 aa9.35□□□□□ -0.91
UBR4-206ENST00000419533 PFKFB2O60825 505 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 TNNC2P02585 160 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 OR52Z1P0C646 297 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 RAD51AP2Q09MP3 1159 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 RSPH3Q86UC2 560 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 UIMC1Q96RL1 719 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 RIOK1Q9BRS2 568 aaKnown RBP9.34□□□□□ -0.91
UBR4-206ENST00000419533 ISCA1Q9BUE6 129 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 AP5M1Q9H0R1 490 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 PCDHA1Q9Y5I3 950 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 ONECUT3O60422 494 aaPredicted RBP9.34□□□□□ -0.91
UBR4-206ENST00000419533 TFDP1Q14186 410 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 CLUL1Q15846 466 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 PNMA8AQ86V59 439 aaPredicted RBP9.34□□□□□ -0.91
UBR4-206ENST00000419533 IPO4Q8TEX9 1081 aaKnown RBP9.34□□□□□ -0.91
UBR4-206ENST00000419533 SEC31BQ9NQW1 1179 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 ZNF277Q9NRM2 450 aaPredicted RBP9.34□□□□□ -0.91
UBR4-206ENST00000419533 SLU7O95391 586 aaKnown RBP9.34□□□□□ -0.91
UBR4-206ENST00000419533 USP17L8P0C7I0 530 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 GOLGA8HP0CJ92 632 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 ADORA1P30542 326 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 ALDH3A1P30838 453 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 RASA3Q14644 834 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 JPH2Q9BR39 696 aaPredicted RBP9.34□□□□□ -0.91
UBR4-206ENST00000419533 H7C1W4 665 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 JAK2O60674 1132 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 N4BP1O75113 896 aaKnown RBP9.34□□□□□ -0.91
UBR4-206ENST00000419533 SEC24BO95487 1268 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 POLA2Q14181 598 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 UTP14CQ5TAP6 766 aaKnown RBP9.34□□□□□ -0.91
UBR4-206ENST00000419533 INTS5Q6P9B9 1019 aaKnown RBP9.34□□□□□ -0.91
UBR4-206ENST00000419533 RTEL1Q9NZ71 1219 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 STIM2Q9P246 746 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 hCG_1984214I3L0E3 225 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 TERF1P54274 439 aa9.34□□□□□ -0.91
UBR4-206ENST00000419533 MYSM1Q5VVJ2 828 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms