RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 AIFM3Q96NN9 605 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 CCDC66A2RUB6 948 aa14.72□□□□□ -0.05
LINC00642-201ENST00000419459 PALM3A6NDB9 673 aaPredicted RBP14.72□□□□□ -0.05
LINC00642-201ENST00000419459 TNNT1P13805 278 aa14.72□□□□□ -0.05
LINC00642-201ENST00000419459 FDPSP14324 419 aaKnown RBP14.72□□□□□ -0.05
LINC00642-201ENST00000419459 FAM83BQ5T0W9 1011 aa14.72□□□□□ -0.05
LINC00642-201ENST00000419459 TMTC3Q6ZXV5 915 aa14.72□□□□□ -0.05
LINC00642-201ENST00000419459 C2orf69Q8N8R5 385 aa14.72□□□□□ -0.05
LINC00642-201ENST00000419459 GMCL1P1Q8NEA9 526 aa14.72□□□□□ -0.05
LINC00642-201ENST00000419459 SLC26A6Q9BXS9 759 aa14.72□□□□□ -0.05
LINC00642-201ENST00000419459 SCAND2PQ9GZW5 306 aaPredicted RBP14.72□□□□□ -0.05
LINC00642-201ENST00000419459 VCPKMTQ9H867 229 aa14.72□□□□□ -0.05
LINC00642-201ENST00000419459 AFG3L2Q9Y4W6 797 aa14.72□□□□□ -0.05
LINC00642-201ENST00000419459 PASKQ96RG2 1323 aa14.72□□□□□ -0.05
LINC00642-201ENST00000419459 SMCHD1A6NHR9 2005 aa14.72□□□□□ -0.05
LINC00642-201ENST00000419459 DHX16O60231 1041 aaKnown RBP14.71□□□□□ -0.05
LINC00642-201ENST00000419459 TOMM70O94826 608 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 KIF5BP33176 963 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 ZNF75DP51815 510 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 RCAN1P53805 252 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 BACE1P56817 501 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 ZNF543Q08ER8 600 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 FUT2Q10981 343 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 LDLRAD1Q5T700 205 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 CCDC186Q7Z3E2 898 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 HOMER1Q86YM7 354 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 SMC1BQ8NDV3 1235 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 VAT1LQ9HCJ6 419 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 GOPCQ9HD26 462 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 EMILIN3Q9NT22 766 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 CCDC196A0A1B0GTZ2 297 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 GJA5P36382 358 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 HUNKP57058 714 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 KIAA1683Q9H0B3 1180 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 FBXO28Q9NVF7 368 aa14.71□□□□□ -0.05
LINC00642-201ENST00000419459 RBM28Q9NW13 759 aaKnown RBP14.71□□□□□ -0.05
LINC00642-201ENST00000419459 CNTNAP5Q8WYK1 1306 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 BRCA2P51587 3418 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 TMEM232C9JQI7 657 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 IFNAR1P17181 557 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 VCAM1P19320 739 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 SNAP25P60880 206 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 IKQ13123 557 aaPredicted RBP14.7□□□□□ -0.06
LINC00642-201ENST00000419459 ZNF397Q8NF99 534 aaPredicted RBP14.7□□□□□ -0.06
LINC00642-201ENST00000419459 KIF18AQ8NI77 898 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 SMARCC2Q8TAQ2 1214 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 TNMDQ9H2S6 317 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 AS3MTQ9HBK9 375 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 ORC3Q9UBD5 711 aaPredicted RBP14.7□□□□□ -0.06
LINC00642-201ENST00000419459 V9GY48 417 aaPredicted RBP14.7□□□□□ -0.06
LINC00642-201ENST00000419459 SPDYE5A6NIY4 337 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 BMP3P12645 472 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 ASPRV1Q53RT3 343 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 ERO1BQ86YB8 467 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 KRT222Q8N1A0 295 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 SLC10A4Q96EP9 437 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 C16orf45Q96MC5 204 aaPredicted RBP14.7□□□□□ -0.06
LINC00642-201ENST00000419459 WDR18Q9BV38 432 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 SH2D4AQ9H788 454 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 GINM1Q9NU53 330 aa14.7□□□□□ -0.06
LINC00642-201ENST00000419459 PARP14Q460N5 1801 aa14.69□□□□□ -0.06
LINC00642-201ENST00000419459 A0A0U1RQG5 324 aaPredicted RBP14.69□□□□□ -0.06
LINC00642-201ENST00000419459 GUCY1B3Q02153 619 aa14.69□□□□□ -0.06
LINC00642-201ENST00000419459 SARM1Q6SZW1 724 aa14.69□□□□□ -0.06
LINC00642-201ENST00000419459 DRC7Q8IY82 874 aa14.69□□□□□ -0.06
LINC00642-201ENST00000419459 GMCL1Q96IK5 515 aa14.69□□□□□ -0.06
LINC00642-201ENST00000419459 MAP3K14Q99558 947 aa14.69□□□□□ -0.06
LINC00642-201ENST00000419459 TANGO6Q9C0B7 1094 aa14.69□□□□□ -0.06
LINC00642-201ENST00000419459 CBX8Q9HC52 389 aa14.69□□□□□ -0.06
LINC00642-201ENST00000419459 KIF2AO00139 706 aaPredicted RBP14.68□□□□□ -0.06
LINC00642-201ENST00000419459 SLFN14P0C7P3 912 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 PPATQ06203 517 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 SSRP1Q08945 709 aaKnown RBP14.68□□□□□ -0.06
LINC00642-201ENST00000419459 TREML2Q5T2D2 321 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 GPATCH4Q5T3I0 446 aaKnown RBP14.68□□□□□ -0.06
LINC00642-201ENST00000419459 OTUD7BQ6GQQ9 843 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 CPLX2Q6PUV4 134 aaKnown RBP14.68□□□□□ -0.06
LINC00642-201ENST00000419459 SAPCD2Q86UD0 394 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 ADGRF4Q8IZF3 695 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 DCAF4Q8WV16 495 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 LLPHQ9BRT6 129 aaKnown RBP14.68□□□□□ -0.06
LINC00642-201ENST00000419459 TRIM5Q9C035 493 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 CLSTN2Q9H4D0 955 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 KCND1Q9NSA2 647 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 CDKL5O76039 1030 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 FMNL1O95466 1100 aaPredicted RBP14.68□□□□□ -0.06
LINC00642-201ENST00000419459 TAL1P17542 331 aaPredicted RBP14.68□□□□□ -0.06
LINC00642-201ENST00000419459 STAT2P52630 851 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 PPP2R5BQ15173 497 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 ANO6Q4KMQ2 910 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 LUZP1Q86V48 1076 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 GPKOWQ92917 476 aaPredicted RBP eCLIP14.68□□□□□ -0.06
LINC00642-201ENST00000419459 KIFC2Q96AC6 838 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 PIGSQ96S52 555 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 RPAP3Q9H6T3 665 aaPredicted RBP14.68□□□□□ -0.06
LINC00642-201ENST00000419459 FAM53CQ9NYF3 392 aa14.68□□□□□ -0.06
LINC00642-201ENST00000419459 VPS37CA5D8V6 355 aaPredicted RBP14.67□□□□□ -0.06
LINC00642-201ENST00000419459 FKBP1BP68106 108 aa14.67□□□□□ -0.06
LINC00642-201ENST00000419459 TERF2Q15554 542 aa14.67□□□□□ -0.06
LINC00642-201ENST00000419459 PKN1Q16512 942 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms