RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 KIF1BPQ96EK5 621 aa8.71□□□□□ -1.02
CASP4-202ENST00000417440 CDX2Q99626 313 aaPredicted RBP8.71□□□□□ -1.02
CASP4-202ENST00000417440 SH2D4AQ9H788 454 aa8.71□□□□□ -1.02
CASP4-202ENST00000417440 VCPKMTQ9H867 229 aa8.71□□□□□ -1.02
CASP4-202ENST00000417440 XPNPEP3Q9NQH7 507 aa8.71□□□□□ -1.02
CASP4-202ENST00000417440 FBXO28Q9NVF7 368 aa8.71□□□□□ -1.02
CASP4-202ENST00000417440 TMX2Q9Y320 296 aa8.71□□□□□ -1.02
CASP4-202ENST00000417440 LAMA2P24043 3122 aaKnown RBP8.71□□□□□ -1.02
CASP4-202ENST00000417440 USP17L12C9JPN9 530 aa8.7□□□□□ -1.02
CASP4-202ENST00000417440 USP17L21D6R901 530 aa8.7□□□□□ -1.02
CASP4-202ENST00000417440 PQBP1O60828 265 aaKnown RBP8.7□□□□□ -1.02
CASP4-202ENST00000417440 RARBP10826 455 aa8.7□□□□□ -1.02
CASP4-202ENST00000417440 TAL1P17542 331 aaPredicted RBP8.7□□□□□ -1.02
CASP4-202ENST00000417440 ADD2P35612 726 aa8.7□□□□□ -1.02
CASP4-202ENST00000417440 CDK8P49336 464 aa8.7□□□□□ -1.02
CASP4-202ENST00000417440 TLE2Q04725 743 aa8.7□□□□□ -1.02
CASP4-202ENST00000417440 KCTD2Q14681 263 aa8.7□□□□□ -1.02
CASP4-202ENST00000417440 FAM109BQ6ICB4 259 aaPredicted RBP8.7□□□□□ -1.02
CASP4-202ENST00000417440 MYLIPQ8WY64 445 aa8.7□□□□□ -1.02
CASP4-202ENST00000417440 SEMA6BQ9H3T3 888 aa8.7□□□□□ -1.02
CASP4-202ENST00000417440 PDLIM7Q9NR12 457 aa8.7□□□□□ -1.02
CASP4-202ENST00000417440 ATP8A2Q9NTI2 1148 aa8.7□□□□□ -1.02
CASP4-202ENST00000417440 PAG1Q9NWQ8 432 aa8.7□□□□□ -1.02
CASP4-202ENST00000417440 SLC4A4Q9Y6R1 1079 aa8.7□□□□□ -1.02
CASP4-202ENST00000417440 MYO5AQ9Y4I1 1855 aaKnown RBP8.7□□□□□ -1.02
CASP4-202ENST00000417440 WDR46O15213 610 aaKnown RBP8.69□□□□□ -1.02
CASP4-202ENST00000417440 SLC25A27O95847 323 aa8.69□□□□□ -1.02
CASP4-202ENST00000417440 IGHA2P01877 340 aa8.69□□□□□ -1.02
CASP4-202ENST00000417440 ITGB8P26012 769 aa8.69□□□□□ -1.02
CASP4-202ENST00000417440 STAT3P40763 770 aa8.69□□□□□ -1.02
CASP4-202ENST00000417440 FAM83BQ5T0W9 1011 aa8.69□□□□□ -1.02
CASP4-202ENST00000417440 C12orf60Q5U649 245 aa8.69□□□□□ -1.02
CASP4-202ENST00000417440 RNF180Q86T96 592 aa8.69□□□□□ -1.02
CASP4-202ENST00000417440 ABRAQ8N0Z2 381 aa8.69□□□□□ -1.02
CASP4-202ENST00000417440 MAFAQ8NHW3 353 aaPredicted RBP8.69□□□□□ -1.02
CASP4-202ENST00000417440 RNPC3Q96LT9 517 aaKnown RBP8.69□□□□□ -1.02
CASP4-202ENST00000417440 CCDC17Q96LX7 622 aa8.69□□□□□ -1.02
CASP4-202ENST00000417440 NUP88Q99567 741 aaPredicted RBP8.69□□□□□ -1.02
CASP4-202ENST00000417440 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.69□□□□□ -1.02
CASP4-202ENST00000417440 GOPCQ9HD26 462 aa8.69□□□□□ -1.02
CASP4-202ENST00000417440 COG6Q9Y2V7 657 aa8.69□□□□□ -1.02
CASP4-202ENST00000417440 FOCADQ5VW36 1801 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 CDK5RAP2Q96SN8 1893 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 MYH1P12882 1939 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 A0A1W2PQ45 241 aaPredicted RBP8.68□□□□□ -1.02
CASP4-202ENST00000417440 A0A1W2PQY0 241 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 VWA5AO00534 786 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 HMMRO75330 724 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 CLTBP09497 229 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 FOSL2P15408 326 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 RAG1P15918 1043 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 EPHB4P54760 987 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 SNX17Q15036 470 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 CTR9Q6PD62 1173 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 ADGRD1Q6QNK2 874 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 C16orf86Q6ZW13 317 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 SIRT2Q8IXJ6 389 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.68□□□□□ -1.02
CASP4-202ENST00000417440 VTI1AQ96AJ9 217 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 CHMP4CQ96CF2 233 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 DDX11Q96FC9 970 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 TINF2Q9BSI4 451 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 TTYH1Q9H313 450 aaPredicted RBP8.68□□□□□ -1.02
CASP4-202ENST00000417440 KANSL2Q9H9L4 492 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 TMEM39AQ9NV64 488 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 ZHX1Q9UKY1 873 aaPredicted RBP8.68□□□□□ -1.02
CASP4-202ENST00000417440 PPP1R9AQ9ULJ8 1098 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 PHF24Q9UPV7 400 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 CNPY2Q9Y2B0 182 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 CTDP1Q9Y5B0 961 aaPredicted RBP8.68□□□□□ -1.02
CASP4-202ENST00000417440 TACC3Q9Y6A5 838 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 UNC80Q8N2C7 3258 aa8.68□□□□□ -1.02
CASP4-202ENST00000417440 MINDY4BA8MYZ0 360 aa8.67□□□□□ -1.02
CASP4-202ENST00000417440 HRO43593 1189 aa8.67□□□□□ -1.02
CASP4-202ENST00000417440 SMARCA5O60264 1052 aaPredicted RBP8.67□□□□□ -1.02
CASP4-202ENST00000417440 RAB11FIP3O75154 756 aa8.67□□□□□ -1.02
CASP4-202ENST00000417440 AKR1A1P14550 325 aa8.67□□□□□ -1.02
CASP4-202ENST00000417440 ATP5JP18859 108 aa8.67□□□□□ -1.02
CASP4-202ENST00000417440 SMAD3P84022 425 aaKnown RBP8.67□□□□□ -1.02
CASP4-202ENST00000417440 FPGSQ05932 587 aa8.67□□□□□ -1.02
CASP4-202ENST00000417440 ZNF792Q3KQV3 632 aa8.67□□□□□ -1.02
CASP4-202ENST00000417440 SNRNP48Q6IEG0 339 aaKnown RBP8.67□□□□□ -1.02
CASP4-202ENST00000417440 RIOX2Q8IUF8 465 aa8.67□□□□□ -1.02
CASP4-202ENST00000417440 RPAP2Q8IXW5 612 aaPredicted RBP8.67□□□□□ -1.02
CASP4-202ENST00000417440 CPXCR1Q8N123 301 aa8.67□□□□□ -1.02
CASP4-202ENST00000417440 HAUS7Q99871 368 aa8.67□□□□□ -1.02
CASP4-202ENST00000417440 PUS7LQ9H0K6 701 aaKnown RBP8.67□□□□□ -1.02
CASP4-202ENST00000417440 MKNK2Q9HBH9 465 aa8.67□□□□□ -1.02
CASP4-202ENST00000417440 STARD7Q9NQZ5 370 aa8.67□□□□□ -1.02
CASP4-202ENST00000417440 SEPT9Q9UHD8 586 aaPredicted RBP8.67□□□□□ -1.02
CASP4-202ENST00000417440 ISY1Q9ULR0 285 aaKnown RBP8.67□□□□□ -1.02
CASP4-202ENST00000417440 ZNF865P0CJ78 1059 aaPredicted RBP8.66□□□□□ -1.02
CASP4-202ENST00000417440 ACLYP53396 1101 aa8.66□□□□□ -1.02
CASP4-202ENST00000417440 KCNA10Q16322 511 aa8.66□□□□□ -1.02
CASP4-202ENST00000417440 C1orf53Q5VUE5 145 aa8.66□□□□□ -1.02
CASP4-202ENST00000417440 ZSCAN25Q6NSZ9 544 aa8.66□□□□□ -1.02
CASP4-202ENST00000417440 PPM1EQ8WY54 764 aa8.66□□□□□ -1.02
CASP4-202ENST00000417440 KIFC2Q96AC6 838 aa8.66□□□□□ -1.02
CASP4-202ENST00000417440 CLIP2Q9UDT6 1046 aa8.66□□□□□ -1.02
CASP4-202ENST00000417440 ZNF214Q9UL59 606 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms