RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 TTC38Q5R3I4 469 aa19.43■□□□□ 0.7
CALD1-204ENST00000417172 CCDC183Q5T5S1 534 aa19.43■□□□□ 0.7
CALD1-204ENST00000417172 JAKMIP3Q5VZ66 844 aa19.43■□□□□ 0.7
CALD1-204ENST00000417172 ADALQ6DHV7 355 aa19.43■□□□□ 0.7
CALD1-204ENST00000417172 BTNL9Q6UXG8 535 aa19.43■□□□□ 0.7
CALD1-204ENST00000417172 SH2D4AQ9H788 454 aa19.43■□□□□ 0.7
CALD1-204ENST00000417172 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.43■□□□□ 0.7
CALD1-204ENST00000417172 CCDC194A0A1B0GVG4 234 aa19.43■□□□□ 0.7
CALD1-204ENST00000417172 USP2O75604 605 aaPredicted RBP19.43■□□□□ 0.7
CALD1-204ENST00000417172 PTPRAP18433 802 aa19.43■□□□□ 0.7
CALD1-204ENST00000417172 USH1GQ495M9 461 aa19.43■□□□□ 0.7
CALD1-204ENST00000417172 GALNT17Q6IS24 598 aa19.43■□□□□ 0.7
CALD1-204ENST00000417172 KIFC2Q96AC6 838 aa19.43■□□□□ 0.7
CALD1-204ENST00000417172 HOOK2Q96ED9 719 aa19.43■□□□□ 0.7
CALD1-204ENST00000417172 NOL7Q9UMY1 257 aaKnown RBP19.43■□□□□ 0.7
CALD1-204ENST00000417172 MYH7BA7E2Y1 1941 aa19.43■□□□□ 0.7
CALD1-204ENST00000417172 PARP14Q460N5 1801 aa19.42■□□□□ 0.7
CALD1-204ENST00000417172 ESYT2A0FGR8 921 aa19.42■□□□□ 0.7
CALD1-204ENST00000417172 hCG_1984214I3L0E3 225 aa19.42■□□□□ 0.7
CALD1-204ENST00000417172 PPP6R2O75170 966 aa19.42■□□□□ 0.7
CALD1-204ENST00000417172 POTEIP0CG38 1075 aa19.42■□□□□ 0.7
CALD1-204ENST00000417172 POTEJP0CG39 1038 aa19.42■□□□□ 0.7
CALD1-204ENST00000417172 GNA11P29992 359 aa19.42■□□□□ 0.7
CALD1-204ENST00000417172 ADCY7P51828 1080 aa19.42■□□□□ 0.7
CALD1-204ENST00000417172 SPP2Q13103 211 aa19.42■□□□□ 0.7
CALD1-204ENST00000417172 SUPT20HL1Q3ZLR7 823 aa19.42■□□□□ 0.7
CALD1-204ENST00000417172 SPECC1Q5M775 1068 aa19.42■□□□□ 0.7
CALD1-204ENST00000417172 USP50Q70EL3 339 aaPredicted RBP19.42■□□□□ 0.7
CALD1-204ENST00000417172 ZNF713Q8N859 430 aaPredicted RBP19.42■□□□□ 0.7
CALD1-204ENST00000417172 SYAP1Q96A49 352 aaPredicted RBP19.42■□□□□ 0.7
CALD1-204ENST00000417172 TAF1DQ9H5J8 278 aaPredicted RBP19.42■□□□□ 0.7
CALD1-204ENST00000417172 PCDHA1Q9Y5I3 950 aa19.42■□□□□ 0.7
CALD1-204ENST00000417172 WDR90Q96KV7 1748 aa19.42■□□□□ 0.7
CALD1-204ENST00000417172 ZC3H4Q9UPT8 1303 aaKnown RBP19.41■□□□□ 0.7
CALD1-204ENST00000417172 MCM7P33993 719 aa19.41■□□□□ 0.7
CALD1-204ENST00000417172 NDUFA8P51970 172 aa19.41■□□□□ 0.7
CALD1-204ENST00000417172 SNW1Q13573 536 aaKnown RBP19.41■□□□□ 0.7
CALD1-204ENST00000417172 SHC4Q6S5L8 630 aa19.41■□□□□ 0.7
CALD1-204ENST00000417172 REXO1Q8N1G1 1221 aaKnown RBP19.41■□□□□ 0.7
CALD1-204ENST00000417172 KIAA1683Q9H0B3 1180 aa19.41■□□□□ 0.7
CALD1-204ENST00000417172 PICK1Q9NRD5 415 aa19.41■□□□□ 0.7
CALD1-204ENST00000417172 FBXO2Q9UK22 296 aaPredicted RBP19.41■□□□□ 0.7
CALD1-204ENST00000417172 ZNF445P59923 1031 aa19.41■□□□□ 0.7
CALD1-204ENST00000417172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.41■□□□□ 0.7
CALD1-204ENST00000417172 MRPS27Q92552 414 aaKnown RBP19.41■□□□□ 0.7
CALD1-204ENST00000417172 EMILIN3Q9NT22 766 aa19.41■□□□□ 0.7
CALD1-204ENST00000417172 ZHX2Q9Y6X8 837 aa19.41■□□□□ 0.7
CALD1-204ENST00000417172 A0A1W2PQ27 194 aa19.4■□□□□ 0.7
CALD1-204ENST00000417172 A0A1W2PQ64 194 aa19.4■□□□□ 0.7
CALD1-204ENST00000417172 A0A1W2PQD8 194 aa19.4■□□□□ 0.7
CALD1-204ENST00000417172 CCDC174Q6PII3 467 aa19.4■□□□□ 0.7
CALD1-204ENST00000417172 MOB2Q70IA6 237 aa19.4■□□□□ 0.7
CALD1-204ENST00000417172 ENGASEQ8NFI3 743 aa19.4■□□□□ 0.7
CALD1-204ENST00000417172 RIC8AQ9NPQ8 531 aa19.4■□□□□ 0.7
CALD1-204ENST00000417172 PTPRFP10586 1907 aa19.39■□□□□ 0.7
CALD1-204ENST00000417172 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.39■□□□□ 0.7
CALD1-204ENST00000417172 PTGDRQ13258 359 aa19.39■□□□□ 0.7
CALD1-204ENST00000417172 PPP1R18Q6NYC8 613 aa19.39■□□□□ 0.7
CALD1-204ENST00000417172 CCDC73Q6ZRK6 1079 aa19.39■□□□□ 0.7
CALD1-204ENST00000417172 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.39■□□□□ 0.7
CALD1-204ENST00000417172 FBXO11Q86XK2 927 aa19.39■□□□□ 0.7
CALD1-204ENST00000417172 FAM177A1Q8N128 213 aaPredicted RBP19.39■□□□□ 0.7
CALD1-204ENST00000417172 KRI1Q8N9T8 703 aaKnown RBP19.39■□□□□ 0.7
CALD1-204ENST00000417172 CDCA5Q96FF9 252 aa19.39■□□□□ 0.7
CALD1-204ENST00000417172 GINM1Q9NU53 330 aa19.39■□□□□ 0.7
CALD1-204ENST00000417172 USP17L15C9J2P7 530 aa19.39■□□□□ 0.69
CALD1-204ENST00000417172 USP17L13C9JLJ4 530 aa19.39■□□□□ 0.69
CALD1-204ENST00000417172 USP17L11C9JVI0 530 aa19.39■□□□□ 0.69
CALD1-204ENST00000417172 USP17L18D6R9N7 530 aa19.39■□□□□ 0.69
CALD1-204ENST00000417172 USP17L22D6RA61 530 aa19.39■□□□□ 0.69
CALD1-204ENST00000417172 USP17L17D6RBQ6 530 aa19.39■□□□□ 0.69
CALD1-204ENST00000417172 USP17L19D6RCP7 530 aa19.39■□□□□ 0.69
CALD1-204ENST00000417172 USP17L20D6RJB6 530 aa19.39■□□□□ 0.69
CALD1-204ENST00000417172 VCAM1P19320 739 aa19.39■□□□□ 0.69
CALD1-204ENST00000417172 USP17L24Q0WX57 530 aa19.39■□□□□ 0.69
CALD1-204ENST00000417172 VGLL4Q14135 290 aa19.39■□□□□ 0.69
CALD1-204ENST00000417172 USP17L6PQ6QN14 398 aa19.39■□□□□ 0.69
CALD1-204ENST00000417172 JMYQ8N9B5 988 aa19.39■□□□□ 0.69
CALD1-204ENST00000417172 CNKSR2Q8WXI2 1034 aa19.39■□□□□ 0.69
CALD1-204ENST00000417172 AMNQ9BXJ7 453 aa19.39■□□□□ 0.69
CALD1-204ENST00000417172 NUP62CLQ9H1M0 184 aa19.39■□□□□ 0.69
CALD1-204ENST00000417172 PFKFB1P16118 471 aa19.38■□□□□ 0.69
CALD1-204ENST00000417172 PTPREP23469 700 aa19.38■□□□□ 0.69
CALD1-204ENST00000417172 DEKP35659 375 aaKnown RBP19.38■□□□□ 0.69
CALD1-204ENST00000417172 FAM160A1Q05DH4 1040 aa19.38■□□□□ 0.69
CALD1-204ENST00000417172 KRT25Q7Z3Z0 450 aa19.38■□□□□ 0.69
CALD1-204ENST00000417172 FMR1NBQ8N0W7 255 aaPredicted RBP19.38■□□□□ 0.69
CALD1-204ENST00000417172 ZNF280CQ8ND82 737 aa19.38■□□□□ 0.69
CALD1-204ENST00000417172 TBCKQ8TEA7 893 aa19.38■□□□□ 0.69
CALD1-204ENST00000417172 PSTPIP2Q9H939 334 aa19.38■□□□□ 0.69
CALD1-204ENST00000417172 CEP131Q9UPN4 1083 aa19.38■□□□□ 0.69
CALD1-204ENST00000417172 SNCAIPQ9Y6H5 919 aa19.38■□□□□ 0.69
CALD1-204ENST00000417172 COL11A1P12107 1806 aaPredicted RBP19.37■□□□□ 0.69
CALD1-204ENST00000417172 FSD2A1L4K1 749 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 OPLAHO14841 1288 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 CUTAO60888 179 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 CMA1P23946 247 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 TRAPPC10P48553 1259 aa19.37■□□□□ 0.69
CALD1-204ENST00000417172 CLK2P49760 499 aaKnown RBP19.37■□□□□ 0.69
CALD1-204ENST00000417172 BACE1P56817 501 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms