RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 VSNL1P62760 191 aa16.55■□□□□ 0.24
LINC00475-202ENST00000416438 PIP4K2BP78356 416 aa16.55■□□□□ 0.24
LINC00475-202ENST00000416438 JAKMIP3Q5VZ66 844 aa16.55■□□□□ 0.24
LINC00475-202ENST00000416438 TGFBRAP1Q8WUH2 860 aa16.55■□□□□ 0.24
LINC00475-202ENST00000416438 SETDB2Q96T68 719 aa16.55■□□□□ 0.24
LINC00475-202ENST00000416438 COL5A3P25940 1745 aaPredicted RBP16.55■□□□□ 0.24
LINC00475-202ENST00000416438 B4DLN1 442 aa16.54■□□□□ 0.24
LINC00475-202ENST00000416438 MAP2K7O14733 419 aa16.54■□□□□ 0.24
LINC00475-202ENST00000416438 NKRFO15226 690 aaKnown RBP eCLIP16.54■□□□□ 0.24
LINC00475-202ENST00000416438 GRM4Q14833 912 aa16.54■□□□□ 0.24
LINC00475-202ENST00000416438 WDR59Q6PJI9 974 aa16.54■□□□□ 0.24
LINC00475-202ENST00000416438 OR8K1Q8NGG5 319 aa16.54■□□□□ 0.24
LINC00475-202ENST00000416438 PDE11AQ9HCR9 933 aa16.54■□□□□ 0.24
LINC00475-202ENST00000416438 AGPAT5Q9NUQ2 364 aa16.54■□□□□ 0.24
LINC00475-202ENST00000416438 RNF216Q9NWF9 866 aaPredicted RBP16.54■□□□□ 0.24
LINC00475-202ENST00000416438 LUC7L2Q9Y383 392 aaKnown RBP16.54■□□□□ 0.24
LINC00475-202ENST00000416438 CTAGE15A4D2H0 777 aa16.54■□□□□ 0.24
LINC00475-202ENST00000416438 CTAGE8P0CG41 777 aa16.54■□□□□ 0.24
LINC00475-202ENST00000416438 TRIM14Q14142 442 aa16.54■□□□□ 0.24
LINC00475-202ENST00000416438 CTAGE6Q86UF2 777 aa16.54■□□□□ 0.24
LINC00475-202ENST00000416438 CTAGE4Q8IX94 777 aa16.54■□□□□ 0.24
LINC00475-202ENST00000416438 MSANTD4Q8NCY6 345 aa16.54■□□□□ 0.24
LINC00475-202ENST00000416438 ZNF507Q8TCN5 953 aa16.54■□□□□ 0.24
LINC00475-202ENST00000416438 MYO6Q9UM54 1294 aa16.54■□□□□ 0.24
LINC00475-202ENST00000416438 LGALS16A8MUM7 142 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 STXBP3O00186 592 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 FAM193AP78312 1265 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 MAPKAPK5Q8IW41 473 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 TMEM47Q9BQJ4 181 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 ANKRD2Q9GZV1 360 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 SH3GLB2Q9NR46 395 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 RAB21Q9UL25 225 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 SCN7AQ01118 1682 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 SRGAP2O75044 1071 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 N4BP1O75113 896 aaKnown RBP16.53■□□□□ 0.24
LINC00475-202ENST00000416438 TM4SF1P30408 202 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 HERVK_113P62684 666 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 AMPD2Q01433 879 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 LETM2Q2VYF4 491 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 AMIGO3Q86WK7 504 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 ZNF444Q8N0Y2 327 aaPredicted RBP16.53■□□□□ 0.24
LINC00475-202ENST00000416438 HPS3Q969F9 1004 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 TRERF1Q96PN7 1200 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 KBTBD4Q9NVX7 518 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 CASZ1Q86V15 1759 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 DLEC1Q9Y238 1755 aa16.53■□□□□ 0.24
LINC00475-202ENST00000416438 LDHBP07195 334 aaKnown RBP16.52■□□□□ 0.24
LINC00475-202ENST00000416438 PLCG1P19174 1290 aa16.52■□□□□ 0.24
LINC00475-202ENST00000416438 TXNRD1Q16881 649 aa16.52■□□□□ 0.24
LINC00475-202ENST00000416438 TTI2Q6NXR4 508 aa16.52■□□□□ 0.24
LINC00475-202ENST00000416438 GIMAP8Q8ND71 665 aaPredicted RBP16.52■□□□□ 0.24
LINC00475-202ENST00000416438 DUSP9Q99956 384 aaKnown RBP16.52■□□□□ 0.24
LINC00475-202ENST00000416438 VAT1LQ9HCJ6 419 aa16.52■□□□□ 0.24
LINC00475-202ENST00000416438 BARHL2Q9NY43 387 aa16.52■□□□□ 0.24
LINC00475-202ENST00000416438 ANKIB1Q9P2G1 1089 aa16.52■□□□□ 0.24
LINC00475-202ENST00000416438 ZBTB22O15209 634 aa16.52■□□□□ 0.23
LINC00475-202ENST00000416438 RHOBTB3O94955 611 aa16.52■□□□□ 0.23
LINC00475-202ENST00000416438 FCER1AP12319 257 aa16.52■□□□□ 0.23
LINC00475-202ENST00000416438 STK4Q13043 487 aa16.52■□□□□ 0.23
LINC00475-202ENST00000416438 TAF3Q5VWG9 929 aa16.52■□□□□ 0.23
LINC00475-202ENST00000416438 CSGALNACT2Q8N6G5 542 aa16.52■□□□□ 0.23
LINC00475-202ENST00000416438 L1RE1Q9UN81 338 aa16.52■□□□□ 0.23
LINC00475-202ENST00000416438 RASSF10A6NK89 507 aa16.51■□□□□ 0.23
LINC00475-202ENST00000416438 PSMA7O14818 248 aa16.51■□□□□ 0.23
LINC00475-202ENST00000416438 CCNT1O60563 726 aaKnown RBP16.51■□□□□ 0.23
LINC00475-202ENST00000416438 KCNB1Q14721 858 aa16.51■□□□□ 0.23
LINC00475-202ENST00000416438 WHAMMP3Q1A5X7 153 aa16.51■□□□□ 0.23
LINC00475-202ENST00000416438 CCDC178Q5BJE1 867 aa16.51■□□□□ 0.23
LINC00475-202ENST00000416438 FAM182BQ5T319 152 aa16.51■□□□□ 0.23
LINC00475-202ENST00000416438 HNRNPLLQ8WVV9 542 aaKnown RBP16.51■□□□□ 0.23
LINC00475-202ENST00000416438 TUBGCP2Q9BSJ2 902 aa16.51■□□□□ 0.23
LINC00475-202ENST00000416438 CCSER1Q9C0I3 900 aa16.51■□□□□ 0.23
LINC00475-202ENST00000416438 MAGEC2Q9UBF1 373 aaPredicted RBP16.51■□□□□ 0.23
LINC00475-202ENST00000416438 ADAM21Q9UKJ8 722 aa16.51■□□□□ 0.23
LINC00475-202ENST00000416438 CAPN11Q9UMQ6 739 aa16.51■□□□□ 0.23
LINC00475-202ENST00000416438 KLRF2D3W0D1 207 aa16.51■□□□□ 0.23
LINC00475-202ENST00000416438 ATP1A1P05023 1023 aaKnown RBP16.51■□□□□ 0.23
LINC00475-202ENST00000416438 PDE4DQ08499 809 aa16.51■□□□□ 0.23
LINC00475-202ENST00000416438 CCDC122Q5T0U0 273 aa16.51■□□□□ 0.23
LINC00475-202ENST00000416438 ANKRD40Q6AI12 368 aa16.51■□□□□ 0.23
LINC00475-202ENST00000416438 CABP7Q86V35 215 aa16.51■□□□□ 0.23
LINC00475-202ENST00000416438 DNAJC7Q99615 494 aa16.51■□□□□ 0.23
LINC00475-202ENST00000416438 PDS5AQ29RF7 1337 aaKnown RBP16.51■□□□□ 0.23
LINC00475-202ENST00000416438 PALM3A6NDB9 673 aaPredicted RBP16.5■□□□□ 0.23
LINC00475-202ENST00000416438 RCCD1A6NED2 376 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 GNPATO15228 680 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 EEF1GP26641 437 aaKnown RBP16.5■□□□□ 0.23
LINC00475-202ENST00000416438 TECP42680 631 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 GNAQP50148 359 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 STIM1Q13586 685 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 TUBB2AQ13885 445 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 USP17L2Q6R6M4 530 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 HDXQ7Z353 690 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 GPIHBP1Q8IV16 184 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 ANKS1AQ92625 1134 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 TUBB2BQ9BVA1 445 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 NYXQ9GZU5 481 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 THAP9Q9H5L6 903 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 MYO1AQ9UBC5 1043 aa16.5■□□□□ 0.23
LINC00475-202ENST00000416438 NARFQ9UHQ1 456 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms