RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 SMCO2A6NFE2 343 aa11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 PLA2G6O60733 806 aa11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 CD44P16070 742 aaKnown RBP11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 ADCY7P51828 1080 aa11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 CEBPZQ03701 1054 aaKnown RBP11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 STK38Q15208 465 aa11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 QRICH1Q2TAL8 776 aa11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 RILPL1Q5EBL4 403 aa11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 DLK2Q6UY11 383 aa11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 FBXO11Q86XK2 927 aa11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 IFNLR1Q8IU57 520 aaPredicted RBP11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 TMEM87AQ8NBN3 555 aa11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 RBM46Q8TBY0 533 aaKnown RBP11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 KIFC2Q96AC6 838 aa11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 AMNQ9BXJ7 453 aa11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 GLT8D2Q9H1C3 349 aa11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 PRR12Q9ULL5 1215 aa11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 SNCAIPQ9Y6H5 919 aa11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 DDX49Q9Y6V7 483 aaKnown RBP11.66□□□□□ -0.54
DEPDC4-203ENST00000416321 ELP1O95163 1332 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 TCHHQ07283 1943 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 ESYT2A0FGR8 921 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 MBD3O95983 291 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 VCAM1P19320 739 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 MRPL12P52815 198 aaKnown RBP11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 HMGCS2P54868 508 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 NR5A1Q13285 461 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 ANO1Q5XXA6 986 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 DAGLBQ8NCG7 672 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 OXER1Q8TDS5 423 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 CUL5Q93034 780 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 COA7Q96BR5 231 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 MTMR8Q96EF0 704 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 USP28Q96RU2 1077 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 SLF1Q9BQI6 1058 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 ANP32EQ9BTT0 268 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 ZMYND12Q9H0C1 365 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 RPAP3Q9H6T3 665 aaPredicted RBP11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 ELP3Q9H9T3 547 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 LMBRD1Q9NUN5 540 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 POLR3EQ9NVU0 708 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 CEP131Q9UPN4 1083 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 PCDHA1Q9Y5I3 950 aa11.65□□□□□ -0.54
DEPDC4-203ENST00000416321 TRAK2O60296 914 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 FLOT1O75955 427 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 YEATS4O95619 227 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 POTEIP0CG38 1075 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 POTEJP0CG39 1038 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 ATP2B1P20020 1258 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 UBE2HP62256 183 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 PPATQ06203 517 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 MAP3K11Q16584 847 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 USH1GQ495M9 461 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 TPRNQ4KMQ1 711 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 KIAA1755Q5JYT7 1200 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 CCDC174Q6PII3 467 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 PIK3AP1Q6ZUJ8 805 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 KRT25Q7Z3Z0 450 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 ERO1BQ86YB8 467 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 REXO1Q8N1G1 1221 aaKnown RBP11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 JMYQ8N9B5 988 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 PRPF38AQ8NAV1 312 aaKnown RBP11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 KCNG4Q8TDN1 519 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 LEO1Q8WVC0 666 aaPredicted RBP11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 NMRK2Q9NPI5 230 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 EMILIN3Q9NT22 766 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 RTEL1Q9NZ71 1219 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 PNMA2Q9UL42 364 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 OTOFQ9HC10 1997 aa11.64□□□□□ -0.55
DEPDC4-203ENST00000416321 UNCXA6NJT0 531 aa11.63□□□□□ -0.55
DEPDC4-203ENST00000416321 TRAF5O00463 557 aa11.63□□□□□ -0.55
DEPDC4-203ENST00000416321 ZBED4O75132 1171 aa11.63□□□□□ -0.55
DEPDC4-203ENST00000416321 BMP15O95972 392 aa11.63□□□□□ -0.55
DEPDC4-203ENST00000416321 FDX1P10109 184 aa11.63□□□□□ -0.55
DEPDC4-203ENST00000416321 ME1P48163 572 aa11.63□□□□□ -0.55
DEPDC4-203ENST00000416321 TRAPPC10P48553 1259 aa11.63□□□□□ -0.55
DEPDC4-203ENST00000416321 SNAP25P60880 206 aa11.63□□□□□ -0.55
DEPDC4-203ENST00000416321 FKBP1BP68106 108 aa11.63□□□□□ -0.55
DEPDC4-203ENST00000416321 TYW1BQ6NUM6 668 aa11.63□□□□□ -0.55
DEPDC4-203ENST00000416321 C2orf69Q8N8R5 385 aa11.63□□□□□ -0.55
DEPDC4-203ENST00000416321 SHISA4Q96DD7 197 aa11.63□□□□□ -0.55
DEPDC4-203ENST00000416321 OTUD5Q96G74 571 aa11.63□□□□□ -0.55
DEPDC4-203ENST00000416321 C12orf42Q96LP6 360 aa11.63□□□□□ -0.55
DEPDC4-203ENST00000416321 RANBP17Q9H2T7 1088 aaKnown RBP11.63□□□□□ -0.55
DEPDC4-203ENST00000416321 AFG3L2Q9Y4W6 797 aa11.63□□□□□ -0.55
DEPDC4-203ENST00000416321 PAPPA2Q9BXP8 1791 aa11.62□□□□□ -0.55
DEPDC4-203ENST00000416321 SPDYE5A6NIY4 337 aa11.62□□□□□ -0.55
DEPDC4-203ENST00000416321 USP17L15C9J2P7 530 aa11.62□□□□□ -0.55
DEPDC4-203ENST00000416321 USP17L13C9JLJ4 530 aa11.62□□□□□ -0.55
DEPDC4-203ENST00000416321 USP17L11C9JVI0 530 aa11.62□□□□□ -0.55
DEPDC4-203ENST00000416321 USP17L18D6R9N7 530 aa11.62□□□□□ -0.55
DEPDC4-203ENST00000416321 USP17L22D6RA61 530 aa11.62□□□□□ -0.55
DEPDC4-203ENST00000416321 USP17L17D6RBQ6 530 aa11.62□□□□□ -0.55
DEPDC4-203ENST00000416321 USP17L19D6RCP7 530 aa11.62□□□□□ -0.55
DEPDC4-203ENST00000416321 USP17L20D6RJB6 530 aa11.62□□□□□ -0.55
DEPDC4-203ENST00000416321 SPTLC2O15270 562 aa11.62□□□□□ -0.55
DEPDC4-203ENST00000416321 NASPP49321 788 aaPredicted RBP11.62□□□□□ -0.55
DEPDC4-203ENST00000416321 USP17L24Q0WX57 530 aa11.62□□□□□ -0.55
DEPDC4-203ENST00000416321 PPIL2Q13356 520 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms