RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 KATNBL1Q9H079 304 aa18.4■□□□□ 0.54
DDX56-202ENST00000415758 ZNF287Q9HBT7 754 aa18.4■□□□□ 0.54
DDX56-202ENST00000415758 RAVER2Q9HCJ3 691 aaKnown RBP18.4■□□□□ 0.54
DDX56-202ENST00000415758 A0A0U1RQG5 324 aaPredicted RBP18.39■□□□□ 0.53
DDX56-202ENST00000415758 CTAGE5O15320 804 aa18.39■□□□□ 0.53
DDX56-202ENST00000415758 FDX1P10109 184 aa18.39■□□□□ 0.53
DDX56-202ENST00000415758 TJAP1Q5JTD0 557 aa18.39■□□□□ 0.53
DDX56-202ENST00000415758 GNASQ5JWF2 1037 aa18.39■□□□□ 0.53
DDX56-202ENST00000415758 ARMCX2Q7L311 632 aa18.39■□□□□ 0.53
DDX56-202ENST00000415758 FAM126BQ8IXS8 530 aa18.39■□□□□ 0.53
DDX56-202ENST00000415758 ZNF444Q8N0Y2 327 aaPredicted RBP18.39■□□□□ 0.53
DDX56-202ENST00000415758 TMEM199Q8N511 208 aa18.39■□□□□ 0.53
DDX56-202ENST00000415758 KBTBD3Q8NAB2 608 aa18.39■□□□□ 0.53
DDX56-202ENST00000415758 USP38Q8NB14 1042 aa18.39■□□□□ 0.53
DDX56-202ENST00000415758 APPBP2Q92624 585 aa18.39■□□□□ 0.53
DDX56-202ENST00000415758 KIFC2Q96AC6 838 aa18.39■□□□□ 0.53
DDX56-202ENST00000415758 ECHDC1Q9NTX5 307 aa18.39■□□□□ 0.53
DDX56-202ENST00000415758 MTMR4Q9NYA4 1195 aa18.39■□□□□ 0.53
DDX56-202ENST00000415758 CTDP1Q9Y5B0 961 aaPredicted RBP18.39■□□□□ 0.53
DDX56-202ENST00000415758 CD4P01730 458 aa18.38■□□□□ 0.53
DDX56-202ENST00000415758 CSF2RAP15509 400 aa18.38■□□□□ 0.53
DDX56-202ENST00000415758 CEP95Q96GE4 821 aa18.38■□□□□ 0.53
DDX56-202ENST00000415758 PBX4Q9BYU1 374 aa18.38■□□□□ 0.53
DDX56-202ENST00000415758 MYO9BQ13459 2157 aa18.38■□□□□ 0.53
DDX56-202ENST00000415758 TLR3O15455 904 aaKnown RBP18.37■□□□□ 0.53
DDX56-202ENST00000415758 TTLL1O95922 423 aa18.37■□□□□ 0.53
DDX56-202ENST00000415758 GNAT2P19087 354 aa18.37■□□□□ 0.53
DDX56-202ENST00000415758 SLC4A3P48751 1232 aa18.37■□□□□ 0.53
DDX56-202ENST00000415758 AKNAD1Q5T1N1 836 aa18.37■□□□□ 0.53
DDX56-202ENST00000415758 PSRC1Q6PGN9 363 aaPredicted RBP18.37■□□□□ 0.53
DDX56-202ENST00000415758 ZNF365Q70YC5 407 aa18.37■□□□□ 0.53
DDX56-202ENST00000415758 CCDC144CPQ8IYA2 1237 aa18.37■□□□□ 0.53
DDX56-202ENST00000415758 STK11IPQ8N1F8 1099 aa18.37■□□□□ 0.53
DDX56-202ENST00000415758 FAM133AQ8N9E0 248 aa18.37■□□□□ 0.53
DDX56-202ENST00000415758 SLC43A3Q8NBI5 491 aa18.37■□□□□ 0.53
DDX56-202ENST00000415758 VTI1AQ96AJ9 217 aa18.37■□□□□ 0.53
DDX56-202ENST00000415758 EPB41L4AQ9HCS5 686 aaPredicted RBP18.37■□□□□ 0.53
DDX56-202ENST00000415758 RNF113AO15541 343 aaKnown RBP18.36■□□□□ 0.53
DDX56-202ENST00000415758 GPAA1O43292 621 aa18.36■□□□□ 0.53
DDX56-202ENST00000415758 SMARCA5O60264 1052 aaPredicted RBP18.36■□□□□ 0.53
DDX56-202ENST00000415758 ZFYP08048 801 aaPredicted RBP18.36■□□□□ 0.53
DDX56-202ENST00000415758 PBX2P40425 430 aa18.36■□□□□ 0.53
DDX56-202ENST00000415758 SEZ6LQ9BYH1 1024 aa18.36■□□□□ 0.53
DDX56-202ENST00000415758 PLIN4Q96Q06 1357 aa18.35■□□□□ 0.53
DDX56-202ENST00000415758 GRXCR1A8MXD5 290 aa18.35■□□□□ 0.53
DDX56-202ENST00000415758 PATL2C9JE40 543 aaKnown RBP18.35■□□□□ 0.53
DDX56-202ENST00000415758 CABYRO75952 493 aa18.35■□□□□ 0.53
DDX56-202ENST00000415758 BMP3P12645 472 aa18.35■□□□□ 0.53
DDX56-202ENST00000415758 CNTN2Q02246 1040 aa18.35■□□□□ 0.53
DDX56-202ENST00000415758 CCDC129Q6ZRS4 1044 aa18.35■□□□□ 0.53
DDX56-202ENST00000415758 MIER1Q8N108 512 aa18.35■□□□□ 0.53
DDX56-202ENST00000415758 NEDD1Q8NHV4 660 aa18.35■□□□□ 0.53
DDX56-202ENST00000415758 ATXN2LQ8WWM7 1075 aaKnown RBP18.35■□□□□ 0.53
DDX56-202ENST00000415758 HERVK_113Q902F9 699 aa18.35■□□□□ 0.53
DDX56-202ENST00000415758 GAS2L1Q99501 681 aaPredicted RBP18.35■□□□□ 0.53
DDX56-202ENST00000415758 IL23AQ9NPF7 189 aa18.35■□□□□ 0.53
DDX56-202ENST00000415758 GNEQ9Y223 722 aaKnown RBP18.35■□□□□ 0.53
DDX56-202ENST00000415758 CHD9Q3L8U1 2897 aa18.34■□□□□ 0.53
DDX56-202ENST00000415758 ASTN1O14525 1302 aa18.34■□□□□ 0.53
DDX56-202ENST00000415758 PRDM1O75626 825 aa18.34■□□□□ 0.53
DDX56-202ENST00000415758 TDO2P48775 406 aa18.34■□□□□ 0.53
DDX56-202ENST00000415758 TNFAIP2Q03169 654 aa18.34■□□□□ 0.53
DDX56-202ENST00000415758 SLFN13Q68D06 897 aa18.34■□□□□ 0.53
DDX56-202ENST00000415758 IFNL3Q8IZI9 196 aa18.34■□□□□ 0.53
DDX56-202ENST00000415758 LRRC47Q8N1G4 583 aaKnown RBP18.34■□□□□ 0.53
DDX56-202ENST00000415758 ACAD9Q9H845 621 aa18.34■□□□□ 0.53
DDX56-202ENST00000415758 ZNF536O15090 1300 aa18.33■□□□□ 0.53
DDX56-202ENST00000415758 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.33■□□□□ 0.52
DDX56-202ENST00000415758 SOWAHBA6NEL2 793 aa18.33■□□□□ 0.52
DDX56-202ENST00000415758 ASB14A6NK59 587 aa18.33■□□□□ 0.52
DDX56-202ENST00000415758 TMEM232C9JQI7 657 aa18.33■□□□□ 0.52
DDX56-202ENST00000415758 TNFRSF10AO00220 468 aa18.33■□□□□ 0.52
DDX56-202ENST00000415758 PLA2G6O60733 806 aa18.33■□□□□ 0.52
DDX56-202ENST00000415758 ACRP10323 421 aa18.33■□□□□ 0.52
DDX56-202ENST00000415758 CYP2C18P33260 490 aa18.33■□□□□ 0.52
DDX56-202ENST00000415758 STAT2P52630 851 aa18.33■□□□□ 0.52
DDX56-202ENST00000415758 RAB30Q15771 203 aa18.33■□□□□ 0.52
DDX56-202ENST00000415758 TKFCQ3LXA3 575 aa18.33■□□□□ 0.52
DDX56-202ENST00000415758 FAM160B2Q86V87 743 aa18.33■□□□□ 0.52
DDX56-202ENST00000415758 CHURC1Q8WUH1 139 aa18.33■□□□□ 0.52
DDX56-202ENST00000415758 GMCL1Q96IK5 515 aa18.33■□□□□ 0.52
DDX56-202ENST00000415758 PPP1R12CQ9BZL4 782 aa18.33■□□□□ 0.52
DDX56-202ENST00000415758 PRDM12Q9H4Q4 367 aa18.33■□□□□ 0.52
DDX56-202ENST00000415758 A1CFQ9NQ94 594 aaKnown RBP18.33■□□□□ 0.52
DDX56-202ENST00000415758 APPP05067 770 aa18.32■□□□□ 0.52
DDX56-202ENST00000415758 BEX3Q00994 111 aa18.32■□□□□ 0.52
DDX56-202ENST00000415758 PDE4BQ07343 736 aa18.32■□□□□ 0.52
DDX56-202ENST00000415758 CXCL17Q6UXB2 119 aa18.32■□□□□ 0.52
DDX56-202ENST00000415758 STAG1Q8WVM7 1258 aa18.32■□□□□ 0.52
DDX56-202ENST00000415758 MTIF3Q9H2K0 278 aaKnown RBP18.32■□□□□ 0.52
DDX56-202ENST00000415758 DCTPP1Q9H773 170 aa18.32■□□□□ 0.52
DDX56-202ENST00000415758 HOMER2Q9NSB8 354 aa18.32■□□□□ 0.52
DDX56-202ENST00000415758 MSRAQ9UJ68 235 aa18.32■□□□□ 0.52
DDX56-202ENST00000415758 Q9Y3F1 56 aa18.32■□□□□ 0.52
DDX56-202ENST00000415758 GRIN2DO15399 1336 aa18.31■□□□□ 0.52
DDX56-202ENST00000415758 M0R2C6 588 aa18.31■□□□□ 0.52
DDX56-202ENST00000415758 FGBP02675 491 aa18.31■□□□□ 0.52
DDX56-202ENST00000415758 TSPY3P0CV98 308 aa18.31■□□□□ 0.52
DDX56-202ENST00000415758 TSPY8P0CW00 308 aa18.31■□□□□ 0.52
DDX56-202ENST00000415758 ITGA7Q13683 1181 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms