RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 UBE2OQ9C0C9 1292 aaKnown RBP24.11■■□□□ 1.45
PTPRU-203ENST00000415600 SDSP20132 328 aa24.1■■□□□ 1.45
PTPRU-203ENST00000415600 LRRC41Q15345 812 aa24.1■■□□□ 1.45
PTPRU-203ENST00000415600 MAMDC4Q6UXC1 1216 aa24.1■■□□□ 1.45
PTPRU-203ENST00000415600 IL17RBQ9NRM6 502 aa24.1■■□□□ 1.45
PTPRU-203ENST00000415600 FAM184BQ9ULE4 1060 aa24.1■■□□□ 1.45
PTPRU-203ENST00000415600 DNAJC25-GNG10A0A024R161 153 aa24.09■■□□□ 1.45
PTPRU-203ENST00000415600 TOP1P11387 765 aaKnown RBP24.09■■□□□ 1.45
PTPRU-203ENST00000415600 CCDC96Q2M329 555 aa24.09■■□□□ 1.45
PTPRU-203ENST00000415600 TCP11L1Q9NUJ3 509 aa24.09■■□□□ 1.45
PTPRU-203ENST00000415600 RTP1P59025 263 aa24.08■■□□□ 1.45
PTPRU-203ENST00000415600 KCTD1Q719H9 257 aa24.08■■□□□ 1.45
PTPRU-203ENST00000415600 HOMER2Q9NSB8 354 aa24.08■■□□□ 1.45
PTPRU-203ENST00000415600 PLXNA1Q9UIW2 1896 aa24.08■■□□□ 1.45
PTPRU-203ENST00000415600 PNMA2Q9UL42 364 aa24.08■■□□□ 1.45
PTPRU-203ENST00000415600 NMT2O60551 498 aa24.08■■□□□ 1.44
PTPRU-203ENST00000415600 AKNAD1Q5T1N1 836 aa24.08■■□□□ 1.44
PTPRU-203ENST00000415600 SLC39A5Q6ZMH5 540 aa24.08■■□□□ 1.44
PTPRU-203ENST00000415600 ZNF589Q86UQ0 364 aaPredicted RBP24.08■■□□□ 1.44
PTPRU-203ENST00000415600 TDHQ8IZJ6 230 aa24.08■■□□□ 1.44
PTPRU-203ENST00000415600 SPC25Q9HBM1 224 aa24.08■■□□□ 1.44
PTPRU-203ENST00000415600 INCENPQ9NQS7 918 aa24.08■■□□□ 1.44
PTPRU-203ENST00000415600 ZHX1Q9UKY1 873 aaPredicted RBP24.08■■□□□ 1.44
PTPRU-203ENST00000415600 ATP11BQ9Y2G3 1177 aa24.08■■□□□ 1.44
PTPRU-203ENST00000415600 POTEB2H3BUK9 544 aa24.07■■□□□ 1.44
PTPRU-203ENST00000415600 ZNF865P0CJ78 1059 aaPredicted RBP24.07■■□□□ 1.44
PTPRU-203ENST00000415600 ADCYAP1R1P41586 468 aa24.07■■□□□ 1.44
PTPRU-203ENST00000415600 ESR2Q92731 530 aa24.07■■□□□ 1.44
PTPRU-203ENST00000415600 TTC14Q96N46 770 aa24.07■■□□□ 1.44
PTPRU-203ENST00000415600 ABHD16BQ9H3Z7 469 aa24.07■■□□□ 1.44
PTPRU-203ENST00000415600 RNF146Q9NTX7 359 aa24.07■■□□□ 1.44
PTPRU-203ENST00000415600 MTMR7Q9Y216 660 aa24.07■■□□□ 1.44
PTPRU-203ENST00000415600 ZNF213O14771 459 aa24.06■■□□□ 1.44
PTPRU-203ENST00000415600 NOVP48745 357 aa24.06■■□□□ 1.44
PTPRU-203ENST00000415600 CCDC178Q5BJE1 867 aa24.06■■□□□ 1.44
PTPRU-203ENST00000415600 C1orf53Q5VUE5 145 aa24.06■■□□□ 1.44
PTPRU-203ENST00000415600 PHF24Q9UPV7 400 aa24.06■■□□□ 1.44
PTPRU-203ENST00000415600 HAND2P61296 217 aa24.05■■□□□ 1.44
PTPRU-203ENST00000415600 TRERF1Q96PN7 1200 aa24.05■■□□□ 1.44
PTPRU-203ENST00000415600 TSEN34Q9BSV6 310 aaKnown RBP24.05■■□□□ 1.44
PTPRU-203ENST00000415600 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.05■■□□□ 1.44
PTPRU-203ENST00000415600 PRR12Q9ULL5 1215 aa24.05■■□□□ 1.44
PTPRU-203ENST00000415600 ASB14A6NK59 587 aa24.04■■□□□ 1.44
PTPRU-203ENST00000415600 ALAS1P13196 640 aa24.04■■□□□ 1.44
PTPRU-203ENST00000415600 TAL1P17542 331 aaPredicted RBP24.04■■□□□ 1.44
PTPRU-203ENST00000415600 ACVR2BQ13705 512 aa24.04■■□□□ 1.44
PTPRU-203ENST00000415600 CWC27Q6UX04 472 aaKnown RBP24.04■■□□□ 1.44
PTPRU-203ENST00000415600 NUP133Q8WUM0 1156 aa24.04■■□□□ 1.44
PTPRU-203ENST00000415600 CHMP4CQ96CF2 233 aa24.04■■□□□ 1.44
PTPRU-203ENST00000415600 CTNNA3Q9UI47 895 aa24.04■■□□□ 1.44
PTPRU-203ENST00000415600 DUSP11O75319 330 aaKnown RBP24.03■■□□□ 1.44
PTPRU-203ENST00000415600 SNAI1O95863 264 aaPredicted RBP24.03■■□□□ 1.44
PTPRU-203ENST00000415600 PGK1P00558 417 aa24.03■■□□□ 1.44
PTPRU-203ENST00000415600 MDM2Q00987 491 aaPredicted RBP24.03■■□□□ 1.44
PTPRU-203ENST00000415600 SNX17Q15036 470 aa24.03■■□□□ 1.44
PTPRU-203ENST00000415600 GPR153Q6NV75 609 aa24.03■■□□□ 1.44
PTPRU-203ENST00000415600 CCDC174Q6PII3 467 aa24.03■■□□□ 1.44
PTPRU-203ENST00000415600 FERMT2Q96AC1 680 aa24.03■■□□□ 1.44
PTPRU-203ENST00000415600 AGBL1Q96MI9 1066 aa24.03■■□□□ 1.44
PTPRU-203ENST00000415600 TMEM47Q9BQJ4 181 aa24.03■■□□□ 1.44
PTPRU-203ENST00000415600 CCPG1Q9ULG6 757 aa24.03■■□□□ 1.44
PTPRU-203ENST00000415600 LRIT3Q3SXY7 679 aa24.03■■□□□ 1.44
PTPRU-203ENST00000415600 ARMCX2Q7L311 632 aa24.03■■□□□ 1.44
PTPRU-203ENST00000415600 IQCA1Q86XH1 822 aa24.03■■□□□ 1.44
PTPRU-203ENST00000415600 PRDM5Q9NQX1 630 aaPredicted RBP24.03■■□□□ 1.44
PTPRU-203ENST00000415600 MOXD2PA6NHM9 499 aa24.02■■□□□ 1.44
PTPRU-203ENST00000415600 ICAM1P05362 532 aa24.02■■□□□ 1.44
PTPRU-203ENST00000415600 ANP32AP39687 249 aaKnown RBP24.02■■□□□ 1.44
PTPRU-203ENST00000415600 PCSK9Q8NBP7 692 aaKnown RBP24.02■■□□□ 1.44
PTPRU-203ENST00000415600 A1CFQ9NQ94 594 aaKnown RBP24.02■■□□□ 1.44
PTPRU-203ENST00000415600 ZNF536O15090 1300 aa24.02■■□□□ 1.44
PTPRU-203ENST00000415600 SMCHD1A6NHR9 2005 aa24.01■■□□□ 1.43
PTPRU-203ENST00000415600 IMMTQ16891 758 aaKnown RBP24.01■■□□□ 1.43
PTPRU-203ENST00000415600 TRIM60Q495X7 471 aa24.01■■□□□ 1.43
PTPRU-203ENST00000415600 SYDE2Q5VT97 1194 aa24.01■■□□□ 1.43
PTPRU-203ENST00000415600 BTNL9Q6UXG8 535 aa24.01■■□□□ 1.43
PTPRU-203ENST00000415600 FAM133AQ8N9E0 248 aa24.01■■□□□ 1.43
PTPRU-203ENST00000415600 CCDC144CPQ8IYA2 1237 aa24■■□□□ 1.43
PTPRU-203ENST00000415600 DSCC1Q9BVC3 393 aa24■■□□□ 1.43
PTPRU-203ENST00000415600 TACC3Q9Y6A5 838 aa24■■□□□ 1.43
PTPRU-203ENST00000415600 SYNRGQ9UMZ2 1314 aa24■■□□□ 1.43
PTPRU-203ENST00000415600 ADAMTS4O75173 837 aa23.99■■□□□ 1.43
PTPRU-203ENST00000415600 BMP2KLQ5H9B9 411 aa23.99■■□□□ 1.43
PTPRU-203ENST00000415600 RANBP17Q9H2T7 1088 aaKnown RBP23.99■■□□□ 1.43
PTPRU-203ENST00000415600 STARD7Q9NQZ5 370 aa23.99■■□□□ 1.43
PTPRU-203ENST00000415600 ADD3Q9UEY8 706 aaKnown RBP23.99■■□□□ 1.43
PTPRU-203ENST00000415600 A0A1W2PQ45 241 aaPredicted RBP23.99■■□□□ 1.43
PTPRU-203ENST00000415600 A0A1W2PQY0 241 aa23.99■■□□□ 1.43
PTPRU-203ENST00000415600 CCDC144BQ3MJ40 725 aa23.99■■□□□ 1.43
PTPRU-203ENST00000415600 GPATCH4Q5T3I0 446 aaKnown RBP23.99■■□□□ 1.43
PTPRU-203ENST00000415600 DGKHQ86XP1 1220 aa23.99■■□□□ 1.43
PTPRU-203ENST00000415600 TBC1D10CQ8IV04 446 aa23.99■■□□□ 1.43
PTPRU-203ENST00000415600 GLT1D1Q96MS3 346 aa23.99■■□□□ 1.43
PTPRU-203ENST00000415600 GPCPD1Q9NPB8 672 aa23.99■■□□□ 1.43
PTPRU-203ENST00000415600 C6orf222P0C671 652 aaPredicted RBP23.98■■□□□ 1.43
PTPRU-203ENST00000415600 PDHBP11177 359 aa23.98■■□□□ 1.43
PTPRU-203ENST00000415600 ACLYP53396 1101 aa23.98■■□□□ 1.43
PTPRU-203ENST00000415600 CNTN2Q02246 1040 aa23.98■■□□□ 1.43
PTPRU-203ENST00000415600 NSMFQ6X4W1 530 aa23.98■■□□□ 1.43
PTPRU-203ENST00000415600 NOL8Q76FK4 1167 aaKnown RBP23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms